RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 PCYT1BQ9Y5K3 369 aaPredicted RBP13.6□□□□□ -0.23
TNFRSF1A-202ENST00000366159 RGSL1A5PLK6 1076 aa13.59□□□□□ -0.23
TNFRSF1A-202ENST00000366159 PLD2O14939 933 aa13.59□□□□□ -0.23
TNFRSF1A-202ENST00000366159 DNAJC6O75061 913 aa13.59□□□□□ -0.23
TNFRSF1A-202ENST00000366159 TNFSF15O95150 251 aa13.59□□□□□ -0.23
TNFRSF1A-202ENST00000366159 ECEL1O95672 775 aa13.59□□□□□ -0.23
TNFRSF1A-202ENST00000366159 COMTP21964 271 aa13.59□□□□□ -0.23
TNFRSF1A-202ENST00000366159 UGT1A5P35504 534 aa13.59□□□□□ -0.23
TNFRSF1A-202ENST00000366159 MAZP56270 477 aaKnown RBP13.59□□□□□ -0.23
TNFRSF1A-202ENST00000366159 SLC14A2Q15849 920 aa13.59□□□□□ -0.23
TNFRSF1A-202ENST00000366159 ZFYVE27Q5T4F4 411 aa13.59□□□□□ -0.23
TNFRSF1A-202ENST00000366159 TRIM74Q86UV6 250 aa13.59□□□□□ -0.23
TNFRSF1A-202ENST00000366159 Q8N9G6 341 aaPredicted RBP13.59□□□□□ -0.23
TNFRSF1A-202ENST00000366159 PATE1Q8WXA2 126 aa13.59□□□□□ -0.23
TNFRSF1A-202ENST00000366159 TMEM74Q96NL1 305 aa13.59□□□□□ -0.23
TNFRSF1A-202ENST00000366159 FCRL3Q96P31 734 aaPredicted RBP13.59□□□□□ -0.23
TNFRSF1A-202ENST00000366159 UBL7Q96S82 380 aaPredicted RBP13.59□□□□□ -0.23
TNFRSF1A-202ENST00000366159 SLC25A51Q9H1U9 297 aa13.59□□□□□ -0.23
TNFRSF1A-202ENST00000366159 ACSL6Q9UKU0 697 aa13.59□□□□□ -0.23
TNFRSF1A-202ENST00000366159 ATXN7L1Q9ULK2 861 aaPredicted RBP13.59□□□□□ -0.23
TNFRSF1A-202ENST00000366159 PCDHGA7Q9Y5G6 932 aa13.59□□□□□ -0.23
TNFRSF1A-202ENST00000366159 ALG6Q9Y672 507 aa13.59□□□□□ -0.23
TNFRSF1A-202ENST00000366159 UNC13CQ8NB66 2214 aa13.59□□□□□ -0.23
TNFRSF1A-202ENST00000366159 C1orf232A0A0U1RR37 186 aa13.58□□□□□ -0.24
TNFRSF1A-202ENST00000366159 GOLGA6CA6NDK9 693 aa13.58□□□□□ -0.24
TNFRSF1A-202ENST00000366159 GOLGA6BA6NDN3 693 aa13.58□□□□□ -0.24
TNFRSF1A-202ENST00000366159 FADS2P1A8MWK0 482 aa13.58□□□□□ -0.24
TNFRSF1A-202ENST00000366159 PPM1DO15297 605 aa13.58□□□□□ -0.24
TNFRSF1A-202ENST00000366159 KRT1P04264 644 aa13.58□□□□□ -0.24
TNFRSF1A-202ENST00000366159 GOLGA6DP0CG33 693 aa13.58□□□□□ -0.24
TNFRSF1A-202ENST00000366159 NR2C2P49116 596 aa13.58□□□□□ -0.24
TNFRSF1A-202ENST00000366159 ADCY2Q08462 1091 aa13.58□□□□□ -0.24
TNFRSF1A-202ENST00000366159 AP1B1Q10567 949 aa13.58□□□□□ -0.24
TNFRSF1A-202ENST00000366159 SQSTM1Q13501 440 aa13.58□□□□□ -0.24
TNFRSF1A-202ENST00000366159 PRKD1Q15139 912 aaPredicted RBP13.58□□□□□ -0.24
TNFRSF1A-202ENST00000366159 TEX44Q53QW1 395 aa13.58□□□□□ -0.24
TNFRSF1A-202ENST00000366159 DOK6Q6PKX4 331 aa13.58□□□□□ -0.24
TNFRSF1A-202ENST00000366159 SLC30A9Q6PML9 568 aa13.58□□□□□ -0.24
TNFRSF1A-202ENST00000366159 PCSK4Q6UW60 755 aa13.58□□□□□ -0.24
TNFRSF1A-202ENST00000366159 ZNF574Q6ZN55 896 aaPredicted RBP13.58□□□□□ -0.24
TNFRSF1A-202ENST00000366159 RAB11FIP2Q7L804 512 aa13.58□□□□□ -0.24
TNFRSF1A-202ENST00000366159 GPR155Q7Z3F1 870 aa13.58□□□□□ -0.24
TNFRSF1A-202ENST00000366159 TMC3Q7Z5M5 1100 aa13.58□□□□□ -0.24
TNFRSF1A-202ENST00000366159 NT5DC3Q86UY8 548 aa13.58□□□□□ -0.24
TNFRSF1A-202ENST00000366159 LSM14AQ8ND56 463 aaKnown RBP13.58□□□□□ -0.24
TNFRSF1A-202ENST00000366159 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.58□□□□□ -0.24
TNFRSF1A-202ENST00000366159 KCNE4Q8WWG9 221 aa13.58□□□□□ -0.24
TNFRSF1A-202ENST00000366159 NAF1Q96HR8 494 aaKnown RBP13.58□□□□□ -0.24
TNFRSF1A-202ENST00000366159 OR2M4Q96R27 311 aa13.58□□□□□ -0.24
TNFRSF1A-202ENST00000366159 MAK16Q9BXY0 300 aaKnown RBP13.58□□□□□ -0.24
TNFRSF1A-202ENST00000366159 ADGRE3Q9BY15 652 aa13.58□□□□□ -0.24
TNFRSF1A-202ENST00000366159 CEP41Q9BYV8 373 aa13.58□□□□□ -0.24
TNFRSF1A-202ENST00000366159 CDH19Q9H159 772 aa13.58□□□□□ -0.24
TNFRSF1A-202ENST00000366159 FAM83DQ9H4H8 585 aa13.58□□□□□ -0.24
TNFRSF1A-202ENST00000366159 SYNDIG1Q9H7V2 258 aa13.58□□□□□ -0.24
TNFRSF1A-202ENST00000366159 EPB41L5Q9HCM4 733 aa13.58□□□□□ -0.24
TNFRSF1A-202ENST00000366159 GOLGA6AQ9NYA3 693 aa13.58□□□□□ -0.24
TNFRSF1A-202ENST00000366159 VPS18Q9P253 973 aa13.58□□□□□ -0.24
TNFRSF1A-202ENST00000366159 NFKBIL1Q9UBC1 381 aaPredicted RBP13.58□□□□□ -0.24
TNFRSF1A-202ENST00000366159 OAS3Q9Y6K5 1087 aaKnown RBP13.58□□□□□ -0.24
TNFRSF1A-202ENST00000366159 BAHCC1Q9P281 2608 aa13.57□□□□□ -0.24
TNFRSF1A-202ENST00000366159 TEX51A0A1B0GUA7 166 aa13.57□□□□□ -0.24
TNFRSF1A-202ENST00000366159 PPP1R12AO14974 1030 aaPredicted RBP13.57□□□□□ -0.24
TNFRSF1A-202ENST00000366159 ATXN7O15265 892 aaPredicted RBP13.57□□□□□ -0.24
TNFRSF1A-202ENST00000366159 INPP4BO15327 924 aa13.57□□□□□ -0.24
TNFRSF1A-202ENST00000366159 PSTPIP1O43586 416 aa13.57□□□□□ -0.24
TNFRSF1A-202ENST00000366159 PTPN3P26045 913 aa13.57□□□□□ -0.24
TNFRSF1A-202ENST00000366159 CD1CP29017 333 aa13.57□□□□□ -0.24
TNFRSF1A-202ENST00000366159 MAGEA1P43355 309 aa13.57□□□□□ -0.24
TNFRSF1A-202ENST00000366159 NOP2P46087 812 aaKnown RBP13.57□□□□□ -0.24
TNFRSF1A-202ENST00000366159 GPR3P46089 330 aa13.57□□□□□ -0.24
TNFRSF1A-202ENST00000366159 UCNP55089 124 aa13.57□□□□□ -0.24
TNFRSF1A-202ENST00000366159 OR1D5P58170 312 aa13.57□□□□□ -0.24
TNFRSF1A-202ENST00000366159 PEX6Q13608 980 aa13.57□□□□□ -0.24
TNFRSF1A-202ENST00000366159 COL9A2Q14055 689 aaPredicted RBP13.57□□□□□ -0.24
TNFRSF1A-202ENST00000366159 LRP8Q14114 963 aa13.57□□□□□ -0.24
TNFRSF1A-202ENST00000366159 GALNT3Q14435 633 aa13.57□□□□□ -0.24
TNFRSF1A-202ENST00000366159 CLPPQ16740 277 aaPredicted RBP13.57□□□□□ -0.24
TNFRSF1A-202ENST00000366159 B4GALNT4Q76KP1 1039 aa13.57□□□□□ -0.24
TNFRSF1A-202ENST00000366159 LYSMD3Q7Z3D4 306 aa13.57□□□□□ -0.24
TNFRSF1A-202ENST00000366159 RFX6Q8HWS3 928 aa13.57□□□□□ -0.24
TNFRSF1A-202ENST00000366159 FBXO39Q8N4B4 442 aa13.57□□□□□ -0.24
TNFRSF1A-202ENST00000366159 TMEM159Q96B96 161 aa13.57□□□□□ -0.24
TNFRSF1A-202ENST00000366159 TEKT5Q96M29 485 aa13.57□□□□□ -0.24
TNFRSF1A-202ENST00000366159 AGAP3Q96P47 875 aa13.57□□□□□ -0.24
TNFRSF1A-202ENST00000366159 STRADBQ9C0K7 418 aa13.57□□□□□ -0.24
TNFRSF1A-202ENST00000366159 SEMA6CQ9H3T2 930 aa13.57□□□□□ -0.24
TNFRSF1A-202ENST00000366159 SUDS3Q9H7L9 328 aaPredicted RBP13.57□□□□□ -0.24
TNFRSF1A-202ENST00000366159 GLOD4Q9HC38 313 aa13.57□□□□□ -0.24
TNFRSF1A-202ENST00000366159 MAGEE1Q9HCI5 957 aa13.57□□□□□ -0.24
TNFRSF1A-202ENST00000366159 SAE1Q9UBE0 346 aaPredicted RBP13.57□□□□□ -0.24
TNFRSF1A-202ENST00000366159 ADGRG1Q9Y653 693 aa13.57□□□□□ -0.24
TNFRSF1A-202ENST00000366159 FASNP49327 2511 aaKnown RBP13.57□□□□□ -0.24
TNFRSF1A-202ENST00000366159 ZFC3H1O60293 1989 aaKnown RBP13.56□□□□□ -0.24
TNFRSF1A-202ENST00000366159 A0A0A6YYK5 440 aaPredicted RBP13.56□□□□□ -0.24
TNFRSF1A-202ENST00000366159 TK2O00142 265 aa13.56□□□□□ -0.24
TNFRSF1A-202ENST00000366159 NVLO15381 856 aaKnown RBP13.56□□□□□ -0.24
TNFRSF1A-202ENST00000366159 KLK10O43240 276 aa13.56□□□□□ -0.24
TNFRSF1A-202ENST00000366159 CPNE6O95741 557 aa13.56□□□□□ -0.24
TNFRSF1A-202ENST00000366159 EML2O95834 649 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms