RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 IKQ13123 557 aaPredicted RBP4.26□□□□□ -1.73
RNU6-560P-201ENST00000364007 SF3B4Q15427 424 aaKnown RBP eCLIP4.26□□□□□ -1.73
RNU6-560P-201ENST00000364007 ADIPOQQ15848 244 aa4.26□□□□□ -1.73
RNU6-560P-201ENST00000364007 ATP13A5Q4VNC0 1218 aa4.26□□□□□ -1.73
RNU6-560P-201ENST00000364007 SOWAHCQ53LP3 525 aaPredicted RBP4.26□□□□□ -1.73
RNU6-560P-201ENST00000364007 SPATA1Q5VX52 437 aa4.26□□□□□ -1.73
RNU6-560P-201ENST00000364007 RGMBQ6NW40 437 aa4.26□□□□□ -1.73
RNU6-560P-201ENST00000364007 PDXDC1Q6P996 788 aa4.26□□□□□ -1.73
RNU6-560P-201ENST00000364007 TMEM154Q6P9G4 183 aa4.26□□□□□ -1.73
RNU6-560P-201ENST00000364007 CLEC4GQ6UXB4 293 aa4.26□□□□□ -1.73
RNU6-560P-201ENST00000364007 CFAP77Q6ZQR2 320 aa4.26□□□□□ -1.73
RNU6-560P-201ENST00000364007 SZRD1Q7Z422 152 aa4.26□□□□□ -1.73
RNU6-560P-201ENST00000364007 RNF168Q8IYW5 571 aaPredicted RBP4.26□□□□□ -1.73
RNU6-560P-201ENST00000364007 ADGRF2Q8IZF7 708 aa4.26□□□□□ -1.73
RNU6-560P-201ENST00000364007 PCDH20Q8N6Y1 951 aaKnown RBP4.26□□□□□ -1.73
RNU6-560P-201ENST00000364007 C9orf106Q8NAJ2 232 aa4.26□□□□□ -1.73
RNU6-560P-201ENST00000364007 CSNK2A3Q8NEV1 391 aa4.26□□□□□ -1.73
RNU6-560P-201ENST00000364007 SPATA22Q8NHS9 363 aa4.26□□□□□ -1.73
RNU6-560P-201ENST00000364007 NUDCD2Q8WVJ2 157 aa4.26□□□□□ -1.73
RNU6-560P-201ENST00000364007 MTBPQ96DY7 904 aa4.26□□□□□ -1.73
RNU6-560P-201ENST00000364007 FAM120BQ96EK7 910 aaKnown RBP4.26□□□□□ -1.73
RNU6-560P-201ENST00000364007 MED30Q96HR3 178 aa4.26□□□□□ -1.73
RNU6-560P-201ENST00000364007 THOC3Q96J01 351 aaKnown RBP4.26□□□□□ -1.73
RNU6-560P-201ENST00000364007 MARK4Q96L34 752 aa4.26□□□□□ -1.73
RNU6-560P-201ENST00000364007 GAD1Q99259 594 aa4.26□□□□□ -1.73
RNU6-560P-201ENST00000364007 NCAPGQ9BPX3 1015 aa4.26□□□□□ -1.73
RNU6-560P-201ENST00000364007 PLK3Q9H4B4 646 aa4.26□□□□□ -1.73
RNU6-560P-201ENST00000364007 GAREM1Q9H706 876 aa4.26□□□□□ -1.73
RNU6-560P-201ENST00000364007 C1RLQ9NZP8 487 aa4.26□□□□□ -1.73
RNU6-560P-201ENST00000364007 CWC15Q9P013 229 aaKnown RBP4.26□□□□□ -1.73
RNU6-560P-201ENST00000364007 ACSL5Q9ULC5 683 aa4.26□□□□□ -1.73
RNU6-560P-201ENST00000364007 KCNS2Q9ULS6 477 aa4.26□□□□□ -1.73
RNU6-560P-201ENST00000364007 PADI3Q9ULW8 664 aa4.26□□□□□ -1.73
RNU6-560P-201ENST00000364007 PDS5AQ29RF7 1337 aaKnown RBP4.25□□□□□ -1.73
RNU6-560P-201ENST00000364007 WDR81Q562E7 1941 aa4.25□□□□□ -1.73
RNU6-560P-201ENST00000364007 IGLV5-37A0A075B6J1 123 aa4.25□□□□□ -1.73
RNU6-560P-201ENST00000364007 hCG_1807616A0A1W2PRN6 198 aa4.25□□□□□ -1.73
RNU6-560P-201ENST00000364007 HS6ST1O60243 411 aa4.25□□□□□ -1.73
RNU6-560P-201ENST00000364007 GAGE7O76087 117 aa4.25□□□□□ -1.73
RNU6-560P-201ENST00000364007 ICAM1P05362 532 aa4.25□□□□□ -1.73
RNU6-560P-201ENST00000364007 RB1P06400 928 aa4.25□□□□□ -1.73
RNU6-560P-201ENST00000364007 GAGE12FP0CL80 117 aa4.25□□□□□ -1.73
RNU6-560P-201ENST00000364007 GAGE12GP0CL81 117 aa4.25□□□□□ -1.73
RNU6-560P-201ENST00000364007 GAGE12IP0CL82 117 aa4.25□□□□□ -1.73
RNU6-560P-201ENST00000364007 T-ENOLP0DO92 83 aa4.25□□□□□ -1.73
RNU6-560P-201ENST00000364007 ALOX12P18054 663 aa4.25□□□□□ -1.73
RNU6-560P-201ENST00000364007 ANXA7P20073 488 aaKnown RBP4.25□□□□□ -1.73
RNU6-560P-201ENST00000364007 ACADLP28330 430 aa4.25□□□□□ -1.73
RNU6-560P-201ENST00000364007 HOXC9P31274 260 aa4.25□□□□□ -1.73
RNU6-560P-201ENST00000364007 PRCPP42785 496 aa4.25□□□□□ -1.73
RNU6-560P-201ENST00000364007 CAMPP49913 170 aa4.25□□□□□ -1.73
RNU6-560P-201ENST00000364007 SEC61BP60468 96 aaKnown RBP4.25□□□□□ -1.73
RNU6-560P-201ENST00000364007 SEC61A1P61619 476 aaKnown RBP4.25□□□□□ -1.73
RNU6-560P-201ENST00000364007 FOXM1Q08050 763 aa4.25□□□□□ -1.73
RNU6-560P-201ENST00000364007 KIF5AQ12840 1032 aa4.25□□□□□ -1.73
RNU6-560P-201ENST00000364007 GAGE1Q13065 139 aa4.25□□□□□ -1.73
RNU6-560P-201ENST00000364007 GAGE4Q13068 117 aa4.25□□□□□ -1.73
RNU6-560P-201ENST00000364007 PNLIPRP3Q17RR3 467 aa4.25□□□□□ -1.73
RNU6-560P-201ENST00000364007 ZNF585BQ52M93 769 aa4.25□□□□□ -1.73
RNU6-560P-201ENST00000364007 ZNF517Q6ZMY9 492 aaPredicted RBP4.25□□□□□ -1.73
RNU6-560P-201ENST00000364007 ARMC9Q7Z3E5 817 aa4.25□□□□□ -1.73
RNU6-560P-201ENST00000364007 CACNA2D4Q7Z3S7 1137 aa4.25□□□□□ -1.73
RNU6-560P-201ENST00000364007 NRROSQ86YC3 692 aa4.25□□□□□ -1.73
RNU6-560P-201ENST00000364007 TICAM1Q8IUC6 712 aa4.25□□□□□ -1.73
RNU6-560P-201ENST00000364007 ADHFE1Q8IWW8 467 aa4.25□□□□□ -1.73
RNU6-560P-201ENST00000364007 DUSP19Q8WTR2 217 aa4.25□□□□□ -1.73
RNU6-560P-201ENST00000364007 TANKQ92844 425 aa4.25□□□□□ -1.73
RNU6-560P-201ENST00000364007 NSUN4Q96CB9 384 aaKnown RBP4.25□□□□□ -1.73
RNU6-560P-201ENST00000364007 OR1F2PQ96R84 312 aa4.25□□□□□ -1.73
RNU6-560P-201ENST00000364007 MTERF1Q99551 399 aaKnown RBP4.25□□□□□ -1.73
RNU6-560P-201ENST00000364007 PCDHGB4Q9UN71 923 aa4.25□□□□□ -1.73
RNU6-560P-201ENST00000364007 IGKV2D-30A0A075B6S6 120 aa4.24□□□□□ -1.73
RNU6-560P-201ENST00000364007 A0A1W2PQ09 198 aa4.24□□□□□ -1.73
RNU6-560P-201ENST00000364007 SPINT2O43291 252 aa4.24□□□□□ -1.73
RNU6-560P-201ENST00000364007 TPPPO94811 219 aa4.24□□□□□ -1.73
RNU6-560P-201ENST00000364007 PPP1R3DO95685 299 aa4.24□□□□□ -1.73
RNU6-560P-201ENST00000364007 PMS2P2O95744 297 aa4.24□□□□□ -1.73
RNU6-560P-201ENST00000364007 LINC00271P0C7V0 271 aa4.24□□□□□ -1.73
RNU6-560P-201ENST00000364007 PORP16435 677 aaPredicted RBP4.24□□□□□ -1.73
RNU6-560P-201ENST00000364007 TMEM11P17152 192 aa4.24□□□□□ -1.73
RNU6-560P-201ENST00000364007 UBA1P22314 1058 aaKnown RBP4.24□□□□□ -1.73
RNU6-560P-201ENST00000364007 BDNFP23560 247 aa4.24□□□□□ -1.73
RNU6-560P-201ENST00000364007 ACSL1P33121 698 aa4.24□□□□□ -1.73
RNU6-560P-201ENST00000364007 ACTN2P35609 894 aa4.24□□□□□ -1.73
RNU6-560P-201ENST00000364007 PSMB10P40306 273 aa4.24□□□□□ -1.73
RNU6-560P-201ENST00000364007 APOBEC1P41238 236 aaKnown RBP4.24□□□□□ -1.73
RNU6-560P-201ENST00000364007 PEX5P50542 639 aa4.24□□□□□ -1.73
RNU6-560P-201ENST00000364007 ZBED6P86452 979 aa4.24□□□□□ -1.73
RNU6-560P-201ENST00000364007 ACSM2AQ08AH3 577 aa4.24□□□□□ -1.73
RNU6-560P-201ENST00000364007 PRKG2Q13237 762 aa4.24□□□□□ -1.73
RNU6-560P-201ENST00000364007 CUL4AQ13619 759 aa4.24□□□□□ -1.73
RNU6-560P-201ENST00000364007 CALCRLQ16602 461 aa4.24□□□□□ -1.73
RNU6-560P-201ENST00000364007 ZNF805Q5CZA5 627 aa4.24□□□□□ -1.73
RNU6-560P-201ENST00000364007 RILPL1Q5EBL4 403 aa4.24□□□□□ -1.73
RNU6-560P-201ENST00000364007 RAB41Q5JT25 222 aa4.24□□□□□ -1.73
RNU6-560P-201ENST00000364007 KCNT1Q5JUK3 1230 aa4.24□□□□□ -1.73
RNU6-560P-201ENST00000364007 DCST1Q5T197 706 aa4.24□□□□□ -1.73
RNU6-560P-201ENST00000364007 LRCH2Q5VUJ6 765 aa4.24□□□□□ -1.73
RNU6-560P-201ENST00000364007 NSUN5P2Q63ZY6 315 aa4.24□□□□□ -1.73
RNU6-560P-201ENST00000364007 ACSM2BQ68CK6 577 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms