RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 SREBF2Q12772 1141 aa3.77□□□□□ -1.81
RNU6-28P-201ENST00000362378 TRAF1Q13077 416 aa3.77□□□□□ -1.81
RNU6-28P-201ENST00000362378 CTTNQ14247 550 aaKnown RBP3.77□□□□□ -1.81
RNU6-28P-201ENST00000362378 GPR18Q14330 331 aa3.77□□□□□ -1.81
RNU6-28P-201ENST00000362378 PTGR1Q14914 329 aa3.77□□□□□ -1.81
RNU6-28P-201ENST00000362378 EZH2Q15910 746 aaKnown RBP3.77□□□□□ -1.81
RNU6-28P-201ENST00000362378 SRSF7Q16629 238 aaKnown RBP eCLIP3.77□□□□□ -1.81
RNU6-28P-201ENST00000362378 MTX3Q5HYI7 312 aa3.77□□□□□ -1.81
RNU6-28P-201ENST00000362378 C9orf152Q5JTZ5 239 aa3.77□□□□□ -1.81
RNU6-28P-201ENST00000362378 SHFQ7M4L6 423 aa3.77□□□□□ -1.81
RNU6-28P-201ENST00000362378 PLPPR4Q7Z2D5 763 aa3.77□□□□□ -1.81
RNU6-28P-201ENST00000362378 CTU1Q7Z7A3 348 aaKnown RBP3.77□□□□□ -1.81
RNU6-28P-201ENST00000362378 SRRM1Q8IYB3 904 aaKnown RBP3.77□□□□□ -1.81
RNU6-28P-201ENST00000362378 C7orf57Q8NEG2 295 aa3.77□□□□□ -1.81
RNU6-28P-201ENST00000362378 NTN5Q8WTR8 489 aaPredicted RBP3.77□□□□□ -1.81
RNU6-28P-201ENST00000362378 LRFN5Q96NI6 719 aa3.77□□□□□ -1.81
RNU6-28P-201ENST00000362378 DACH2Q96NX9 599 aa3.77□□□□□ -1.81
RNU6-28P-201ENST00000362378 DGAT2Q96PD7 388 aa3.77□□□□□ -1.81
RNU6-28P-201ENST00000362378 NUDCD1Q96RS6 583 aa3.77□□□□□ -1.81
RNU6-28P-201ENST00000362378 HAUS8Q9BT25 410 aa3.77□□□□□ -1.81
RNU6-28P-201ENST00000362378 ERVMER34-1Q9H9K5 563 aa3.77□□□□□ -1.81
RNU6-28P-201ENST00000362378 ZBTB40Q9NUA8 1239 aa3.77□□□□□ -1.81
RNU6-28P-201ENST00000362378 GDE1Q9NZC3 331 aa3.77□□□□□ -1.81
RNU6-28P-201ENST00000362378 C5AR2Q9P296 337 aa3.77□□□□□ -1.81
RNU6-28P-201ENST00000362378 DNAJB4Q9UDY4 337 aa3.77□□□□□ -1.81
RNU6-28P-201ENST00000362378 OR14J1Q9UGF5 321 aa3.77□□□□□ -1.81
RNU6-28P-201ENST00000362378 TTC7AQ9ULT0 858 aaPredicted RBP3.77□□□□□ -1.81
RNU6-28P-201ENST00000362378 PPIEQ9UNP9 301 aaKnown RBP3.77□□□□□ -1.81
RNU6-28P-201ENST00000362378 FRMD4BQ9Y2L6 1034 aa3.77□□□□□ -1.81
RNU6-28P-201ENST00000362378 WBP11Q9Y2W2 641 aaKnown RBP3.77□□□□□ -1.81
RNU6-28P-201ENST00000362378 TRPV2Q9Y5S1 764 aa3.77□□□□□ -1.81
RNU6-28P-201ENST00000362378 GPR75-ASB3A0A0A6YYF3 556 aa3.76□□□□□ -1.81
RNU6-28P-201ENST00000362378 LY6G6EA0A0G2JKS1 128 aa3.76□□□□□ -1.81
RNU6-28P-201ENST00000362378 M0QZ24 198 aa3.76□□□□□ -1.81
RNU6-28P-201ENST00000362378 ITM2AO43736 263 aa3.76□□□□□ -1.81
RNU6-28P-201ENST00000362378 LCATP04180 440 aa3.76□□□□□ -1.81
RNU6-28P-201ENST00000362378 CYP1A2P05177 515 aa3.76□□□□□ -1.81
RNU6-28P-201ENST00000362378 ABCB1P08183 1280 aaPredicted RBP3.76□□□□□ -1.81
RNU6-28P-201ENST00000362378 G6PDP11413 515 aa3.76□□□□□ -1.81
RNU6-28P-201ENST00000362378 GLULP15104 373 aa3.76□□□□□ -1.81
RNU6-28P-201ENST00000362378 PRLRP16471 622 aa3.76□□□□□ -1.81
RNU6-28P-201ENST00000362378 NAGAP17050 411 aa3.76□□□□□ -1.81
RNU6-28P-201ENST00000362378 EIF2S3P41091 472 aaKnown RBP3.76□□□□□ -1.81
RNU6-28P-201ENST00000362378 MSH2P43246 934 aa3.76□□□□□ -1.81
RNU6-28P-201ENST00000362378 MMP13P45452 471 aa3.76□□□□□ -1.81
RNU6-28P-201ENST00000362378 FASLGP48023 281 aa3.76□□□□□ -1.81
RNU6-28P-201ENST00000362378 RFX5P48382 616 aaPredicted RBP3.76□□□□□ -1.81
RNU6-28P-201ENST00000362378 GRSF1Q12849 480 aaKnown RBP eCLIP3.76□□□□□ -1.81
RNU6-28P-201ENST00000362378 DLG2Q15700 870 aa3.76□□□□□ -1.81
RNU6-28P-201ENST00000362378 EFNB3Q15768 340 aa3.76□□□□□ -1.81
RNU6-28P-201ENST00000362378 ALDH1L2Q3SY69 923 aa3.76□□□□□ -1.81
RNU6-28P-201ENST00000362378 CRY2Q49AN0 593 aa3.76□□□□□ -1.81
RNU6-28P-201ENST00000362378 IGSF11Q5DX21 431 aa3.76□□□□□ -1.81
RNU6-28P-201ENST00000362378 C1orf141Q5JVX7 400 aa3.76□□□□□ -1.81
RNU6-28P-201ENST00000362378 B3GNT6Q6ZMB0 384 aa3.76□□□□□ -1.81
RNU6-28P-201ENST00000362378 TAOK1Q7L7X3 1001 aa3.76□□□□□ -1.81
RNU6-28P-201ENST00000362378 MRPL10Q7Z7H8 261 aaKnown RBP3.76□□□□□ -1.81
RNU6-28P-201ENST00000362378 SDCCAG8Q86SQ7 713 aaPredicted RBP3.76□□□□□ -1.81
RNU6-28P-201ENST00000362378 GUF1Q8N442 669 aaKnown RBP3.76□□□□□ -1.81
RNU6-28P-201ENST00000362378 NANOGP1Q8N7R0 232 aa3.76□□□□□ -1.81
RNU6-28P-201ENST00000362378 ZNF548Q8NEK5 533 aaPredicted RBP3.76□□□□□ -1.81
RNU6-28P-201ENST00000362378 APBB2Q92870 758 aa3.76□□□□□ -1.81
RNU6-28P-201ENST00000362378 MMTAG2Q9BU76 263 aaKnown RBP3.76□□□□□ -1.81
RNU6-28P-201ENST00000362378 SIL1Q9H173 461 aa3.76□□□□□ -1.81
RNU6-28P-201ENST00000362378 PIGMQ9H3S5 423 aa3.76□□□□□ -1.81
RNU6-28P-201ENST00000362378 PLAC1Q9HBJ0 212 aa3.76□□□□□ -1.81
RNU6-28P-201ENST00000362378 SLC9A2Q9UBY0 812 aa3.76□□□□□ -1.81
RNU6-28P-201ENST00000362378 CDC14AQ9UNH5 594 aa3.76□□□□□ -1.81
RNU6-28P-201ENST00000362378 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.76□□□□□ -1.81
RNU6-28P-201ENST00000362378 IGHV4-28A0A0C4DH34 117 aa3.75□□□□□ -1.81
RNU6-28P-201ENST00000362378 CPED1A4D0V7 1026 aa3.75□□□□□ -1.81
RNU6-28P-201ENST00000362378 A6NL46 340 aa3.75□□□□□ -1.81
RNU6-28P-201ENST00000362378 BECN2A8MW95 431 aa3.75□□□□□ -1.81
RNU6-28P-201ENST00000362378 H0YGN5 161 aa3.75□□□□□ -1.81
RNU6-28P-201ENST00000362378 H3BQ06 376 aaPredicted RBP3.75□□□□□ -1.81
RNU6-28P-201ENST00000362378 VWA5AO00534 786 aa3.75□□□□□ -1.81
RNU6-28P-201ENST00000362378 TIMM23O14925 209 aa3.75□□□□□ -1.81
RNU6-28P-201ENST00000362378 SPRY3O43610 288 aa3.75□□□□□ -1.81
RNU6-28P-201ENST00000362378 PLRG1O43660 514 aaKnown RBP3.75□□□□□ -1.81
RNU6-28P-201ENST00000362378 ZIC3O60481 467 aa3.75□□□□□ -1.81
RNU6-28P-201ENST00000362378 PSMD10O75832 226 aa3.75□□□□□ -1.81
RNU6-28P-201ENST00000362378 QDPRP09417 244 aa3.75□□□□□ -1.81
RNU6-28P-201ENST00000362378 ENTPD1P49961 510 aa3.75□□□□□ -1.81
RNU6-28P-201ENST00000362378 ARSEP51690 589 aa3.75□□□□□ -1.81
RNU6-28P-201ENST00000362378 HMGA2P52926 109 aa3.75□□□□□ -1.81
RNU6-28P-201ENST00000362378 INHBEP58166 350 aa3.75□□□□□ -1.81
RNU6-28P-201ENST00000362378 ALCAMQ13740 583 aa3.75□□□□□ -1.81
RNU6-28P-201ENST00000362378 SNTB1Q13884 538 aaKnown RBP3.75□□□□□ -1.81
RNU6-28P-201ENST00000362378 HNF4GQ14541 408 aa3.75□□□□□ -1.81
RNU6-28P-201ENST00000362378 EIF2S3LQ2VIR3 472 aaKnown RBP3.75□□□□□ -1.81
RNU6-28P-201ENST00000362378 ODF3L2Q3SX64 289 aa3.75□□□□□ -1.81
RNU6-28P-201ENST00000362378 ZNF628Q5EBL2 1059 aa3.75□□□□□ -1.81
RNU6-28P-201ENST00000362378 DNTTIP2Q5QJE6 756 aaKnown RBP3.75□□□□□ -1.81
RNU6-28P-201ENST00000362378 PXDC1Q5TGL8 231 aa3.75□□□□□ -1.81
RNU6-28P-201ENST00000362378 OTUD1Q5VV17 481 aaPredicted RBP3.75□□□□□ -1.81
RNU6-28P-201ENST00000362378 FRG2Q64ET8 278 aa3.75□□□□□ -1.81
RNU6-28P-201ENST00000362378 LCN10Q6JVE6 187 aa3.75□□□□□ -1.81
RNU6-28P-201ENST00000362378 KRT80Q6KB66 452 aa3.75□□□□□ -1.81
RNU6-28P-201ENST00000362378 SYCE2Q6PIF2 218 aa3.75□□□□□ -1.81
RNU6-28P-201ENST00000362378 Q6ZTK2 550 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms