RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 TBC1D25Q3MII6 688 aa20.22■□□□□ 0.83
CDC42BPB-201ENST00000361246 METTL3Q86U44 580 aaKnown RBP20.22■□□□□ 0.83
CDC42BPB-201ENST00000361246 IL6P05231 212 aa20.22■□□□□ 0.83
CDC42BPB-201ENST00000361246 NDUFA9Q16795 377 aa20.22■□□□□ 0.83
CDC42BPB-201ENST00000361246 IQCF2Q8IXL9 164 aa20.22■□□□□ 0.83
CDC42BPB-201ENST00000361246 PSMG2Q969U7 264 aa20.22■□□□□ 0.83
CDC42BPB-201ENST00000361246 CRISPLD1Q9H336 500 aa20.22■□□□□ 0.83
CDC42BPB-201ENST00000361246 MRPS33Q9Y291 106 aaKnown RBP20.22■□□□□ 0.83
CDC42BPB-201ENST00000361246 TM7SF2O76062 418 aa20.22■□□□□ 0.83
CDC42BPB-201ENST00000361246 ITGA2BP08514 1039 aa20.22■□□□□ 0.83
CDC42BPB-201ENST00000361246 F7P08709 466 aaPredicted RBP20.22■□□□□ 0.83
CDC42BPB-201ENST00000361246 CD48P09326 243 aa20.22■□□□□ 0.83
CDC42BPB-201ENST00000361246 TTC29Q8NA56 475 aaPredicted RBP20.22■□□□□ 0.83
CDC42BPB-201ENST00000361246 ZNF670Q9BS34 389 aa20.22■□□□□ 0.83
CDC42BPB-201ENST00000361246 MARCH7Q9H992 704 aa20.22■□□□□ 0.83
CDC42BPB-201ENST00000361246 ARL5AQ9Y689 179 aa20.22■□□□□ 0.83
CDC42BPB-201ENST00000361246 GRIN2DO15399 1336 aa20.22■□□□□ 0.83
CDC42BPB-201ENST00000361246 MAGEA13PA6NCF6 341 aa20.22■□□□□ 0.83
CDC42BPB-201ENST00000361246 C9JVG2 144 aa20.22■□□□□ 0.83
CDC42BPB-201ENST00000361246 BRI3BPQ8WY22 251 aa20.22■□□□□ 0.83
CDC42BPB-201ENST00000361246 AP4S1Q9Y587 144 aa20.22■□□□□ 0.83
CDC42BPB-201ENST00000361246 CAMTA1Q9Y6Y1 1673 aa20.21■□□□□ 0.83
CDC42BPB-201ENST00000361246 APOLD1Q96LR9 279 aa20.21■□□□□ 0.83
CDC42BPB-201ENST00000361246 GPER1Q99527 375 aa20.21■□□□□ 0.83
CDC42BPB-201ENST00000361246 MRPS26Q9BYN8 205 aaKnown RBP20.21■□□□□ 0.83
CDC42BPB-201ENST00000361246 ADGRA3Q8IWK6 1321 aa20.21■□□□□ 0.83
CDC42BPB-201ENST00000361246 A0A1B0GW55 424 aa20.21■□□□□ 0.83
CDC42BPB-201ENST00000361246 QSOX1O00391 747 aa20.21■□□□□ 0.83
CDC42BPB-201ENST00000361246 C22orf31O95567 290 aa20.21■□□□□ 0.83
CDC42BPB-201ENST00000361246 DUX4L2P0CJ85 424 aa20.21■□□□□ 0.83
CDC42BPB-201ENST00000361246 DUX4L3P0CJ86 424 aa20.21■□□□□ 0.83
CDC42BPB-201ENST00000361246 DUX4L4P0CJ87 422 aa20.21■□□□□ 0.83
CDC42BPB-201ENST00000361246 DUX4L5P0CJ88 424 aa20.21■□□□□ 0.83
CDC42BPB-201ENST00000361246 DUX4L6P0CJ89 424 aa20.21■□□□□ 0.83
CDC42BPB-201ENST00000361246 DUX4L7P0CJ90 424 aa20.21■□□□□ 0.83
CDC42BPB-201ENST00000361246 ME2P23368 584 aa20.21■□□□□ 0.83
CDC42BPB-201ENST00000361246 ELP6Q0PNE2 266 aa20.21■□□□□ 0.83
CDC42BPB-201ENST00000361246 CCINQ13939 588 aa20.21■□□□□ 0.83
CDC42BPB-201ENST00000361246 BRMS1LQ5PSV4 323 aa20.21■□□□□ 0.83
CDC42BPB-201ENST00000361246 ZMIZ2Q8NF64 920 aa20.21■□□□□ 0.83
CDC42BPB-201ENST00000361246 DUX4Q9UBX2 424 aa20.21■□□□□ 0.83
CDC42BPB-201ENST00000361246 FGF1P05230 155 aa20.21■□□□□ 0.83
CDC42BPB-201ENST00000361246 HSPA7P48741 367 aa20.21■□□□□ 0.83
CDC42BPB-201ENST00000361246 BHLHB9Q6PI77 547 aa20.21■□□□□ 0.83
CDC42BPB-201ENST00000361246 LPCAT2Q7L5N7 544 aa20.21■□□□□ 0.83
CDC42BPB-201ENST00000361246 ALYREFQ86V81 257 aaKnown RBP20.21■□□□□ 0.83
CDC42BPB-201ENST00000361246 NPAS2Q99743 824 aa20.21■□□□□ 0.83
CDC42BPB-201ENST00000361246 SIKE1Q9BRV8 207 aa20.21■□□□□ 0.83
CDC42BPB-201ENST00000361246 KIAA1210Q9ULL0 1709 aa20.21■□□□□ 0.83
CDC42BPB-201ENST00000361246 FAM25EA8MYX2 175 aa20.21■□□□□ 0.83
CDC42BPB-201ENST00000361246 OR5F1O95221 314 aa20.21■□□□□ 0.83
CDC42BPB-201ENST00000361246 TRBC1P01850 177 aa20.21■□□□□ 0.83
CDC42BPB-201ENST00000361246 GLOD4Q9HC38 313 aa20.21■□□□□ 0.83
CDC42BPB-201ENST00000361246 IL36AQ9UHA7 158 aa20.21■□□□□ 0.83
CDC42BPB-201ENST00000361246 KYAT3Q6YP21 454 aaKnown RBP20.21■□□□□ 0.83
CDC42BPB-201ENST00000361246 REM2Q8IYK8 340 aaPredicted RBP20.21■□□□□ 0.83
CDC42BPB-201ENST00000361246 OR2AG1Q9H205 316 aa20.21■□□□□ 0.83
CDC42BPB-201ENST00000361246 CLPTM1O96005 669 aa20.2■□□□□ 0.82
CDC42BPB-201ENST00000361246 SNRPB2P08579 225 aaKnown RBP20.2■□□□□ 0.82
CDC42BPB-201ENST00000361246 SAGP10523 405 aaPredicted RBP20.2■□□□□ 0.82
CDC42BPB-201ENST00000361246 SEPHS1P49903 392 aa20.2■□□□□ 0.82
CDC42BPB-201ENST00000361246 JAZF1Q86VZ6 243 aa20.2■□□□□ 0.82
CDC42BPB-201ENST00000361246 ADAMTS15Q8TE58 950 aa20.2■□□□□ 0.82
CDC42BPB-201ENST00000361246 ASB2Q96Q27 587 aa20.2■□□□□ 0.82
CDC42BPB-201ENST00000361246 GPR21Q99679 349 aa20.2■□□□□ 0.82
CDC42BPB-201ENST00000361246 TSC22D4Q9Y3Q8 395 aa20.2■□□□□ 0.82
CDC42BPB-201ENST00000361246 KIF1AQ12756 1690 aa20.2■□□□□ 0.82
CDC42BPB-201ENST00000361246 ARVCFO00192 962 aa20.2■□□□□ 0.82
CDC42BPB-201ENST00000361246 RPP40O75818 363 aaKnown RBP20.2■□□□□ 0.82
CDC42BPB-201ENST00000361246 MLLT3P42568 568 aaPredicted RBP20.2■□□□□ 0.82
CDC42BPB-201ENST00000361246 KCNJ5P48544 419 aa20.2■□□□□ 0.82
CDC42BPB-201ENST00000361246 PRKAA2P54646 552 aa20.2■□□□□ 0.82
CDC42BPB-201ENST00000361246 UGT2B15P54855 530 aa20.2■□□□□ 0.82
CDC42BPB-201ENST00000361246 HECTD2Q5U5R9 776 aa20.2■□□□□ 0.82
CDC42BPB-201ENST00000361246 VSTM1Q6UX27 236 aa20.2■□□□□ 0.82
CDC42BPB-201ENST00000361246 CHERPQ8IWX8 916 aaKnown RBP20.2■□□□□ 0.82
CDC42BPB-201ENST00000361246 OR10H5Q8NGA6 315 aa20.2■□□□□ 0.82
CDC42BPB-201ENST00000361246 TEX47Q8TBZ9 253 aa20.2■□□□□ 0.82
CDC42BPB-201ENST00000361246 RORBQ92753 470 aa20.2■□□□□ 0.82
CDC42BPB-201ENST00000361246 SH3GL2Q99962 352 aa20.2■□□□□ 0.82
CDC42BPB-201ENST00000361246 H3BQF6 201 aa20.2■□□□□ 0.82
CDC42BPB-201ENST00000361246 LIN7AO14910 233 aaPredicted RBP20.2■□□□□ 0.82
CDC42BPB-201ENST00000361246 CST1P01037 141 aa20.2■□□□□ 0.82
CDC42BPB-201ENST00000361246 ITGA3P26006 1051 aa20.2■□□□□ 0.82
CDC42BPB-201ENST00000361246 MC1RQ01726 317 aa20.2■□□□□ 0.82
CDC42BPB-201ENST00000361246 PCDH1Q08174 1060 aa20.2■□□□□ 0.82
CDC42BPB-201ENST00000361246 INTS11Q5TA45 600 aaKnown RBP20.2■□□□□ 0.82
CDC42BPB-201ENST00000361246 RALGPS2Q86X27 583 aaPredicted RBP20.2■□□□□ 0.82
CDC42BPB-201ENST00000361246 LMX1AQ8TE12 382 aa20.2■□□□□ 0.82
CDC42BPB-201ENST00000361246 HEPHQ9BQS7 1158 aa20.2■□□□□ 0.82
CDC42BPB-201ENST00000361246 CA14Q9ULX7 337 aa20.2■□□□□ 0.82
CDC42BPB-201ENST00000361246 ERVW-1Q9UQF0 538 aa20.2■□□□□ 0.82
CDC42BPB-201ENST00000361246 SH3GLB1Q9Y371 365 aa20.2■□□□□ 0.82
CDC42BPB-201ENST00000361246 PLA2G16P53816 162 aa20.2■□□□□ 0.82
CDC42BPB-201ENST00000361246 SMU1Q2TAY7 513 aa20.2■□□□□ 0.82
CDC42BPB-201ENST00000361246 ZDHHC20Q5W0Z9 365 aa20.2■□□□□ 0.82
CDC42BPB-201ENST00000361246 ADAMTSL2Q86TH1 951 aa20.2■□□□□ 0.82
CDC42BPB-201ENST00000361246 SLC47A1Q96FL8 570 aa20.2■□□□□ 0.82
CDC42BPB-201ENST00000361246 PPP3R2Q96LZ3 170 aa20.2■□□□□ 0.82
CDC42BPB-201ENST00000361246 ZNF135P52742 658 aaPredicted RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms