RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 H3BM21 787 aa7.36□□□□□ -1.23
CLCN3-202ENST00000360642 IGLV3-25P01717 112 aa7.36□□□□□ -1.23
CLCN3-202ENST00000360642 MAP4P27816 1152 aaKnown RBP7.36□□□□□ -1.23
CLCN3-202ENST00000360642 RPL9P32969 192 aaKnown RBP7.36□□□□□ -1.23
CLCN3-202ENST00000360642 SERPINB6P35237 376 aa7.36□□□□□ -1.23
CLCN3-202ENST00000360642 CSE1LP55060 971 aaKnown RBP7.36□□□□□ -1.23
CLCN3-202ENST00000360642 ITGA9Q13797 1035 aa7.36□□□□□ -1.23
CLCN3-202ENST00000360642 ZRSR2Q15696 482 aaKnown RBP7.36□□□□□ -1.23
CLCN3-202ENST00000360642 FSCN1Q16658 493 aaKnown RBP7.36□□□□□ -1.23
CLCN3-202ENST00000360642 HSP90AA5PQ58FG0 334 aa7.36□□□□□ -1.23
CLCN3-202ENST00000360642 ITPRIPL1Q6GPH6 555 aa7.36□□□□□ -1.23
CLCN3-202ENST00000360642 DCLRE1AQ6PJP8 1040 aa7.36□□□□□ -1.23
CLCN3-202ENST00000360642 NAPRTQ6XQN6 538 aa7.36□□□□□ -1.23
CLCN3-202ENST00000360642 MFSD4AQ8N468 514 aa7.36□□□□□ -1.23
CLCN3-202ENST00000360642 DNAAF3Q8N9W5 541 aa7.36□□□□□ -1.23
CLCN3-202ENST00000360642 STMN2Q93045 179 aa7.36□□□□□ -1.23
CLCN3-202ENST00000360642 TSGA13Q96PP4 275 aa7.36□□□□□ -1.23
CLCN3-202ENST00000360642 PAAF1Q9BRP4 392 aa7.36□□□□□ -1.23
CLCN3-202ENST00000360642 THTPAQ9BU02 230 aa7.36□□□□□ -1.23
CLCN3-202ENST00000360642 AP5M1Q9H0R1 490 aa7.36□□□□□ -1.23
CLCN3-202ENST00000360642 DNAJB4Q9UDY4 337 aa7.36□□□□□ -1.23
CLCN3-202ENST00000360642 CDY2AQ9Y6F7 541 aa7.36□□□□□ -1.23
CLCN3-202ENST00000360642 LAMA2P24043 3122 aaKnown RBP7.36□□□□□ -1.23
CLCN3-202ENST00000360642 FNDC1Q4ZHG4 1894 aaPredicted RBP7.36□□□□□ -1.23
CLCN3-202ENST00000360642 A0A096LPK6 155 aa7.36□□□□□ -1.23
CLCN3-202ENST00000360642 SLC12A8A0AV02 714 aa7.36□□□□□ -1.23
CLCN3-202ENST00000360642 C2P06681 752 aa7.36□□□□□ -1.23
CLCN3-202ENST00000360642 POU2F2P09086 479 aa7.36□□□□□ -1.23
CLCN3-202ENST00000360642 BTKQ06187 659 aa7.36□□□□□ -1.23
CLCN3-202ENST00000360642 CCDC6Q16204 474 aa7.36□□□□□ -1.23
CLCN3-202ENST00000360642 TIGD5Q53EQ6 642 aa7.36□□□□□ -1.23
CLCN3-202ENST00000360642 TRIM68Q6AZZ1 485 aa7.36□□□□□ -1.23
CLCN3-202ENST00000360642 IGF2-ASQ6U949 168 aa7.36□□□□□ -1.23
CLCN3-202ENST00000360642 EPGNQ6UW88 154 aa7.36□□□□□ -1.23
CLCN3-202ENST00000360642 SEZ6L2Q6UXD5 910 aa7.36□□□□□ -1.23
CLCN3-202ENST00000360642 KCNMB4Q86W47 210 aa7.36□□□□□ -1.23
CLCN3-202ENST00000360642 ARMC10Q8N2F6 343 aa7.36□□□□□ -1.23
CLCN3-202ENST00000360642 ACVR1CQ8NER5 493 aa7.36□□□□□ -1.23
CLCN3-202ENST00000360642 URGCPQ8TCY9 931 aa7.36□□□□□ -1.23
CLCN3-202ENST00000360642 DTX3LQ8TDB6 740 aa7.36□□□□□ -1.23
CLCN3-202ENST00000360642 SCARF2Q96GP6 870 aaPredicted RBP7.36□□□□□ -1.23
CLCN3-202ENST00000360642 MEGF10Q96KG7 1140 aa7.36□□□□□ -1.23
CLCN3-202ENST00000360642 CCDC138Q96M89 665 aa7.36□□□□□ -1.23
CLCN3-202ENST00000360642 PKMYT1Q99640 499 aa7.36□□□□□ -1.23
CLCN3-202ENST00000360642 KIFC1Q9BW19 673 aa7.36□□□□□ -1.23
CLCN3-202ENST00000360642 RIC8BQ9NVN3 520 aa7.36□□□□□ -1.23
CLCN3-202ENST00000360642 EBF1Q9UH73 591 aa7.36□□□□□ -1.23
CLCN3-202ENST00000360642 ARHGAP42A6NI28 874 aa7.35□□□□□ -1.23
CLCN3-202ENST00000360642 TMEM114B3SHH9 223 aa7.35□□□□□ -1.23
CLCN3-202ENST00000360642 C22orf46C9J442 243 aa7.35□□□□□ -1.23
CLCN3-202ENST00000360642 K7ESF4 209 aa7.35□□□□□ -1.23
CLCN3-202ENST00000360642 TIMM44O43615 452 aa7.35□□□□□ -1.23
CLCN3-202ENST00000360642 CHRNA1P02708 482 aa7.35□□□□□ -1.23
CLCN3-202ENST00000360642 NMBRP28336 390 aa7.35□□□□□ -1.23
CLCN3-202ENST00000360642 RAC1P63000 192 aa7.35□□□□□ -1.23
CLCN3-202ENST00000360642 MPP3Q13368 585 aa7.35□□□□□ -1.23
CLCN3-202ENST00000360642 DLG2Q15700 870 aa7.35□□□□□ -1.23
CLCN3-202ENST00000360642 MUM1Q2TAK8 710 aa7.35□□□□□ -1.23
CLCN3-202ENST00000360642 VWA5B1Q5TIE3 1220 aa7.35□□□□□ -1.23
CLCN3-202ENST00000360642 CD300LGQ6UXG3 332 aa7.35□□□□□ -1.23
CLCN3-202ENST00000360642 BEND5Q7L4P6 421 aa7.35□□□□□ -1.23
CLCN3-202ENST00000360642 MRPL10Q7Z7H8 261 aaKnown RBP7.35□□□□□ -1.23
CLCN3-202ENST00000360642 TAC4Q86UU9 113 aa7.35□□□□□ -1.23
CLCN3-202ENST00000360642 TMEM52Q8NDY8 209 aa7.35□□□□□ -1.23
CLCN3-202ENST00000360642 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.35□□□□□ -1.23
CLCN3-202ENST00000360642 LPPQ93052 612 aa7.35□□□□□ -1.23
CLCN3-202ENST00000360642 MYLPFQ96A32 169 aa7.35□□□□□ -1.23
CLCN3-202ENST00000360642 ACBD6Q9BR61 282 aa7.35□□□□□ -1.23
CLCN3-202ENST00000360642 FAM167BQ9BTA0 163 aa7.35□□□□□ -1.23
CLCN3-202ENST00000360642 C1QTNF1Q9BXJ1 281 aa7.35□□□□□ -1.23
CLCN3-202ENST00000360642 SENP6Q9GZR1 1112 aaPredicted RBP7.35□□□□□ -1.23
CLCN3-202ENST00000360642 CAB39LQ9H9S4 337 aa7.35□□□□□ -1.23
CLCN3-202ENST00000360642 ARHGEF38Q9NXL2 777 aa7.35□□□□□ -1.23
CLCN3-202ENST00000360642 DONSONQ9NYP3 566 aa7.35□□□□□ -1.23
CLCN3-202ENST00000360642 GPRC5BQ9NZH0 403 aa7.35□□□□□ -1.23
CLCN3-202ENST00000360642 TRPV2Q9Y5S1 764 aa7.35□□□□□ -1.23
CLCN3-202ENST00000360642 TRPM7Q96QT4 1865 aa7.35□□□□□ -1.23
CLCN3-202ENST00000360642 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.35□□□□□ -1.23
CLCN3-202ENST00000360642 MYADML2A6NDP7 307 aa7.35□□□□□ -1.23
CLCN3-202ENST00000360642 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.35□□□□□ -1.23
CLCN3-202ENST00000360642 AP3B1O00203 1094 aa7.35□□□□□ -1.23
CLCN3-202ENST00000360642 KIF1CO43896 1103 aaKnown RBP7.35□□□□□ -1.23
CLCN3-202ENST00000360642 JCHAINP01591 159 aa7.35□□□□□ -1.23
CLCN3-202ENST00000360642 SBK3P0C264 359 aa7.35□□□□□ -1.23
CLCN3-202ENST00000360642 PCSK1P29120 753 aa7.35□□□□□ -1.23
CLCN3-202ENST00000360642 HADHAP40939 763 aa7.35□□□□□ -1.23
CLCN3-202ENST00000360642 NUMBP49757 651 aa7.35□□□□□ -1.23
CLCN3-202ENST00000360642 CDH17Q12864 832 aa7.35□□□□□ -1.23
CLCN3-202ENST00000360642 ITGA7Q13683 1181 aa7.35□□□□□ -1.23
CLCN3-202ENST00000360642 PDPK2PQ6A1A2 396 aa7.35□□□□□ -1.23
CLCN3-202ENST00000360642 NAPEPLDQ6IQ20 393 aa7.35□□□□□ -1.23
CLCN3-202ENST00000360642 SVOPQ8N4V2 548 aa7.35□□□□□ -1.23
CLCN3-202ENST00000360642 ZNF781Q8N8C0 355 aa7.35□□□□□ -1.23
CLCN3-202ENST00000360642 SHKBP1Q8TBC3 707 aa7.35□□□□□ -1.23
CLCN3-202ENST00000360642 ATXN7L3BQ96GX2 97 aa7.35□□□□□ -1.23
CLCN3-202ENST00000360642 ZNF419Q96HQ0 510 aaPredicted RBP7.35□□□□□ -1.23
CLCN3-202ENST00000360642 VPS39Q96JC1 886 aa7.35□□□□□ -1.23
CLCN3-202ENST00000360642 GPR22Q99680 433 aa7.35□□□□□ -1.23
CLCN3-202ENST00000360642 ORAI3Q9BRQ5 295 aa7.35□□□□□ -1.23
CLCN3-202ENST00000360642 AKTIPQ9H8T0 292 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms