RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 KCNK1O00180 336 aa9.27□□□□□ -0.93
VPS13A-203ENST00000360280 RXRBP28702 533 aa9.27□□□□□ -0.93
VPS13A-203ENST00000360280 RGS8P57771 180 aaPredicted RBP9.27□□□□□ -0.93
VPS13A-203ENST00000360280 CXorf40AQ8TE69 158 aa9.27□□□□□ -0.93
VPS13A-203ENST00000360280 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.27□□□□□ -0.93
VPS13A-203ENST00000360280 PCDHB5Q9Y5E4 795 aa9.27□□□□□ -0.93
VPS13A-203ENST00000360280 XYLBO75191 536 aa9.27□□□□□ -0.93
VPS13A-203ENST00000360280 ERVK-9P63128 1117 aa9.27□□□□□ -0.93
VPS13A-203ENST00000360280 LAPTM4BQ86VI4 370 aa9.27□□□□□ -0.93
VPS13A-203ENST00000360280 PTGR2Q8N8N7 351 aaPredicted RBP9.27□□□□□ -0.93
VPS13A-203ENST00000360280 GALNT6Q8NCL4 622 aa9.27□□□□□ -0.93
VPS13A-203ENST00000360280 OR52K1Q8NGK4 314 aa9.27□□□□□ -0.93
VPS13A-203ENST00000360280 NODALQ96S42 347 aa9.27□□□□□ -0.93
VPS13A-203ENST00000360280 ARHGAP20Q9P2F6 1191 aa9.27□□□□□ -0.93
VPS13A-203ENST00000360280 GPIP06744 558 aa9.27□□□□□ -0.93
VPS13A-203ENST00000360280 RORCP51449 518 aa9.27□□□□□ -0.93
VPS13A-203ENST00000360280 HSPA14Q0VDF9 509 aa9.27□□□□□ -0.93
VPS13A-203ENST00000360280 RBFAQ8N0V3 343 aa9.27□□□□□ -0.93
VPS13A-203ENST00000360280 GALNT15Q8N3T1 639 aa9.27□□□□□ -0.93
VPS13A-203ENST00000360280 PCSK9Q8NBP7 692 aaKnown RBP9.27□□□□□ -0.93
VPS13A-203ENST00000360280 HMGXB4Q9UGU5 601 aa9.27□□□□□ -0.93
VPS13A-203ENST00000360280 CDH22Q9UJ99 828 aa9.27□□□□□ -0.93
VPS13A-203ENST00000360280 PHF24Q9UPV7 400 aa9.27□□□□□ -0.93
VPS13A-203ENST00000360280 KCNE2Q9Y6J6 123 aa9.27□□□□□ -0.93
VPS13A-203ENST00000360280 A0A0J9YYE9 177 aa9.27□□□□□ -0.93
VPS13A-203ENST00000360280 CRY2Q49AN0 593 aa9.27□□□□□ -0.93
VPS13A-203ENST00000360280 CHSY3Q70JA7 882 aa9.27□□□□□ -0.93
VPS13A-203ENST00000360280 ANKRA2Q9H9E1 313 aa9.27□□□□□ -0.93
VPS13A-203ENST00000360280 CCDC88CQ9P219 2028 aa9.27□□□□□ -0.93
VPS13A-203ENST00000360280 DDX3XO00571 662 aaKnown RBP eCLIP9.27□□□□□ -0.931e-11■□□□□ 8.8
VPS13A-203ENST00000360280 MICAL2O94851 1124 aa9.27□□□□□ -0.93
VPS13A-203ENST00000360280 HTR1BP28222 390 aa9.27□□□□□ -0.93
VPS13A-203ENST00000360280 CYP4X1Q8N118 509 aa9.27□□□□□ -0.93
VPS13A-203ENST00000360280 CSGALNACT1Q8TDX6 532 aa9.27□□□□□ -0.93
VPS13A-203ENST00000360280 OMDQ99983 421 aa9.27□□□□□ -0.93
VPS13A-203ENST00000360280 EGFL7Q9UHF1 273 aa9.27□□□□□ -0.93
VPS13A-203ENST00000360280 SLC9A3R1O14745 358 aaPredicted RBP9.27□□□□□ -0.93
VPS13A-203ENST00000360280 ENTPD3O75355 529 aa9.27□□□□□ -0.93
VPS13A-203ENST00000360280 UROSP10746 265 aa9.27□□□□□ -0.93
VPS13A-203ENST00000360280 ATXN7L2Q5T6C5 722 aaPredicted RBP9.27□□□□□ -0.93
VPS13A-203ENST00000360280 POF1BQ8WVV4 589 aa9.27□□□□□ -0.93
VPS13A-203ENST00000360280 UFD1Q92890 307 aa9.27□□□□□ -0.93
VPS13A-203ENST00000360280 MTMR10Q9NXD2 777 aa9.27□□□□□ -0.93
VPS13A-203ENST00000360280 LRATO95237 230 aa9.27□□□□□ -0.93
VPS13A-203ENST00000360280 CES1P23141 567 aa9.27□□□□□ -0.93
VPS13A-203ENST00000360280 LAMTOR4Q0VGL1 99 aa9.27□□□□□ -0.93
VPS13A-203ENST00000360280 PLEKHG6Q3KR16 790 aa9.27□□□□□ -0.93
VPS13A-203ENST00000360280 ATP13A4Q4VNC1 1196 aa9.27□□□□□ -0.93
VPS13A-203ENST00000360280 XKRXQ6PP77 449 aa9.27□□□□□ -0.93
VPS13A-203ENST00000360280 GPR156Q8NFN8 814 aa9.27□□□□□ -0.93
VPS13A-203ENST00000360280 PIH1D1Q9NWS0 290 aaKnown RBP9.27□□□□□ -0.93
VPS13A-203ENST00000360280 AMD1P17707 334 aa9.27□□□□□ -0.93
VPS13A-203ENST00000360280 ALDH4A1P30038 563 aa9.27□□□□□ -0.93
VPS13A-203ENST00000360280 GIT2Q14161 759 aa9.27□□□□□ -0.93
VPS13A-203ENST00000360280 RAB12Q6IQ22 244 aa9.27□□□□□ -0.93
VPS13A-203ENST00000360280 TAS1R2Q8TE23 839 aa9.27□□□□□ -0.93
VPS13A-203ENST00000360280 KCTD4Q8WVF5 259 aa9.27□□□□□ -0.93
VPS13A-203ENST00000360280 ZNF606Q8WXB4 792 aa9.27□□□□□ -0.93
VPS13A-203ENST00000360280 KDM6BO15054 1643 aa9.27□□□□□ -0.93
VPS13A-203ENST00000360280 FESP07332 822 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 S100PP25815 95 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 AP2S1P53680 142 aaPredicted RBP9.26□□□□□ -0.93
VPS13A-203ENST00000360280 DCST1Q5T197 706 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 KLHL35Q6PF15 583 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 HAGHLQ6PII5 290 aaPredicted RBP9.26□□□□□ -0.93
VPS13A-203ENST00000360280 SLC30A8Q8IWU4 369 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 PPP1R13LQ8WUF5 828 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 CHIAQ9BZP6 476 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 U3KQV3 271 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 TULP4Q9NRJ4 1543 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 NRP2O60462 931 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 SUPT20HL2P0C7V6 817 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 LINC00032P0C843 101 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 F8A1P23610 371 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 DLC1Q96QB1 1528 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 A0A1B0GVC2 190 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 NKRFO15226 690 aaKnown RBP eCLIP9.26□□□□□ -0.93
VPS13A-203ENST00000360280 POLR2JP52435 117 aaKnown RBP9.26□□□□□ -0.93
VPS13A-203ENST00000360280 ECT2LQ008S8 904 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 OR2L2Q8NH16 312 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 PFDN5Q99471 154 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 POP1Q99575 1024 aaKnown RBP9.26□□□□□ -0.93
VPS13A-203ENST00000360280 H3BM21 787 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 DHX15O43143 795 aaKnown RBP9.26□□□□□ -0.93
VPS13A-203ENST00000360280 SLC6A4P31645 630 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 AKT2P31751 481 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 RGS19P49795 217 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 MAPK12P53778 367 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 SSTP61278 116 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 CBLBQ13191 982 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 ZNF517Q6ZMY9 492 aaPredicted RBP9.26□□□□□ -0.93
VPS13A-203ENST00000360280 LHFPL3Q86UP9 236 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 CPSF7Q8N684 471 aaKnown RBP9.26□□□□□ -0.93
VPS13A-203ENST00000360280 STOML3Q8TAV4 291 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 ACSL1P33121 698 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 CD86P42081 329 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 CA9Q16790 459 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 HSDL1Q3SXM5 330 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 SEPT12Q8IYM1 358 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 OR12D3Q9UGF7 316 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms