RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 LINGO1Q96FE5 620 aa9.66□□□□□ -0.86
CUX1-203ENST00000360264 ARMCX1Q9P291 453 aa9.66□□□□□ -0.86
CUX1-203ENST00000360264 GPC6Q9Y625 555 aaPredicted RBP9.66□□□□□ -0.86
CUX1-203ENST00000360264 F8VP50 259 aa9.65□□□□□ -0.86
CUX1-203ENST00000360264 DRG2P55039 364 aaKnown RBP9.65□□□□□ -0.86
CUX1-203ENST00000360264 WDR59Q6PJI9 974 aa9.65□□□□□ -0.86
CUX1-203ENST00000360264 DHDDSQ86SQ9 333 aa9.65□□□□□ -0.86
CUX1-203ENST00000360264 FAM71AQ8IYT1 594 aa9.65□□□□□ -0.86
CUX1-203ENST00000360264 OR10G6Q8NH81 332 aa9.65□□□□□ -0.86
CUX1-203ENST00000360264 SGCDQ92629 289 aa9.65□□□□□ -0.86
CUX1-203ENST00000360264 GPATCH1Q9BRR8 931 aaKnown RBP9.65□□□□□ -0.86
CUX1-203ENST00000360264 RAB11FIP5Q9BXF6 653 aa9.65□□□□□ -0.86
CUX1-203ENST00000360264 DNAJC18Q9H819 358 aa9.65□□□□□ -0.86
CUX1-203ENST00000360264 RRAGCQ9HB90 399 aa9.65□□□□□ -0.86
CUX1-203ENST00000360264 VWA7Q9Y334 891 aa9.65□□□□□ -0.86
CUX1-203ENST00000360264 LIASO43766 372 aa9.65□□□□□ -0.86
CUX1-203ENST00000360264 PEX11AO75192 247 aa9.65□□□□□ -0.86
CUX1-203ENST00000360264 ABL2P42684 1182 aa9.65□□□□□ -0.86
CUX1-203ENST00000360264 STXBP1P61764 594 aaKnown RBP9.65□□□□□ -0.86
CUX1-203ENST00000360264 DMTF1Q9Y222 760 aa9.65□□□□□ -0.86
CUX1-203ENST00000360264 IQCMA0A1B0GVH7 501 aa9.65□□□□□ -0.86
CUX1-203ENST00000360264 GSTT2BP0CG30 244 aa9.65□□□□□ -0.86
CUX1-203ENST00000360264 THRBP10828 461 aa9.65□□□□□ -0.86
CUX1-203ENST00000360264 CDK9P50750 372 aaKnown RBP9.65□□□□□ -0.86
CUX1-203ENST00000360264 CYP2R1Q6VVX0 501 aa9.65□□□□□ -0.86
CUX1-203ENST00000360264 P2RX7Q99572 595 aaKnown RBP9.65□□□□□ -0.86
CUX1-203ENST00000360264 ADAMDEC1O15204 470 aa9.65□□□□□ -0.86
CUX1-203ENST00000360264 ERVK-21P61565 698 aa9.65□□□□□ -0.86
CUX1-203ENST00000360264 ZNF155Q12901 538 aaPredicted RBP9.65□□□□□ -0.86
CUX1-203ENST00000360264 MAP1SQ66K74 1059 aaPredicted RBP9.65□□□□□ -0.86
CUX1-203ENST00000360264 CNSTQ6PJW8 725 aa9.65□□□□□ -0.86
CUX1-203ENST00000360264 CACUL1Q86Y37 369 aa9.65□□□□□ -0.86
CUX1-203ENST00000360264 C9orf64Q5T6V5 341 aa9.65□□□□□ -0.86
CUX1-203ENST00000360264 NBPF12Q5TAG4 269 aaPredicted RBP9.65□□□□□ -0.86
CUX1-203ENST00000360264 VSTM1Q6UX27 236 aa9.65□□□□□ -0.86
CUX1-203ENST00000360264 FBXW8Q8N3Y1 598 aa9.65□□□□□ -0.86
CUX1-203ENST00000360264 C2orf15Q8WU43 125 aaKnown RBP9.65□□□□□ -0.86
CUX1-203ENST00000360264 PIH1D2Q8WWB5 315 aa9.65□□□□□ -0.86
CUX1-203ENST00000360264 BTN2A3PQ96KV6 586 aa9.65□□□□□ -0.86
CUX1-203ENST00000360264 LRMDAQ9H2I8 198 aa9.65□□□□□ -0.86
CUX1-203ENST00000360264 AGO3Q9H9G7 860 aaKnown RBP9.65□□□□□ -0.86
CUX1-203ENST00000360264 FAM86B1E9PN63 330 aa9.65□□□□□ -0.86
CUX1-203ENST00000360264 IPO13O94829 963 aaKnown RBP9.65□□□□□ -0.86
CUX1-203ENST00000360264 FAM86B2P0C5J1 330 aa9.65□□□□□ -0.86
CUX1-203ENST00000360264 KCNA5P22460 613 aa9.65□□□□□ -0.86
CUX1-203ENST00000360264 DLG1Q12959 904 aa9.65□□□□□ -0.86
CUX1-203ENST00000360264 BBS12Q6ZW61 710 aa9.65□□□□□ -0.86
CUX1-203ENST00000360264 MREGQ8N565 214 aa9.65□□□□□ -0.86
CUX1-203ENST00000360264 IL12BP29460 328 aa9.65□□□□□ -0.86
CUX1-203ENST00000360264 MNDAP41218 407 aa9.65□□□□□ -0.86
CUX1-203ENST00000360264 RAP1GAP2Q684P5 730 aa9.65□□□□□ -0.86
CUX1-203ENST00000360264 MSANTD1Q6ZTZ1 278 aa9.65□□□□□ -0.86
CUX1-203ENST00000360264 NUP54Q7Z3B4 507 aa9.65□□□□□ -0.86
CUX1-203ENST00000360264 CDYL2Q8N8U2 506 aa9.65□□□□□ -0.86
CUX1-203ENST00000360264 SNIP1Q8TAD8 396 aaKnown RBP9.65□□□□□ -0.86
CUX1-203ENST00000360264 FATE1Q969F0 183 aa9.65□□□□□ -0.86
CUX1-203ENST00000360264 RHOJQ9H4E5 214 aa9.65□□□□□ -0.86
CUX1-203ENST00000360264 CLK4Q9HAZ1 481 aaKnown RBP9.65□□□□□ -0.86
CUX1-203ENST00000360264 RAB21Q9UL25 225 aa9.65□□□□□ -0.86
CUX1-203ENST00000360264 MAN2B2Q9Y2E5 1009 aa9.65□□□□□ -0.86
CUX1-203ENST00000360264 GMEB1Q9Y692 573 aa9.65□□□□□ -0.86
CUX1-203ENST00000360264 PSMG1O95456 288 aa9.65□□□□□ -0.86
CUX1-203ENST00000360264 RBL1P28749 1068 aa9.65□□□□□ -0.86
CUX1-203ENST00000360264 AAGABQ6PD74 315 aa9.65□□□□□ -0.86
CUX1-203ENST00000360264 CPNE9Q8IYJ1 553 aa9.65□□□□□ -0.86
CUX1-203ENST00000360264 POU5F2Q8N7G0 328 aa9.65□□□□□ -0.86
CUX1-203ENST00000360264 RNF31Q96EP0 1072 aa9.65□□□□□ -0.86
CUX1-203ENST00000360264 RAP2CQ9Y3L5 183 aa9.65□□□□□ -0.86
CUX1-203ENST00000360264 LMTK2Q8IWU2 1503 aa9.65□□□□□ -0.87
CUX1-203ENST00000360264 POP4O95707 220 aaKnown RBP9.65□□□□□ -0.87
CUX1-203ENST00000360264 MECP2P51608 486 aaKnown RBP9.65□□□□□ -0.87
CUX1-203ENST00000360264 ATXN1P54253 815 aaKnown RBP9.65□□□□□ -0.87
CUX1-203ENST00000360264 TMEM44Q2T9K0 475 aa9.65□□□□□ -0.87
CUX1-203ENST00000360264 CCNYL2Q5T2Q4 361 aa9.65□□□□□ -0.87
CUX1-203ENST00000360264 C15orf52Q6ZUT6 534 aaKnown RBP9.65□□□□□ -0.87
CUX1-203ENST00000360264 YTHDF3Q7Z739 585 aaKnown RBP9.65□□□□□ -0.87
CUX1-203ENST00000360264 ZBTB2Q8N680 514 aa9.65□□□□□ -0.87
CUX1-203ENST00000360264 CDCA5Q96FF9 252 aa9.65□□□□□ -0.87
CUX1-203ENST00000360264 C12orf66Q96MD2 445 aa9.65□□□□□ -0.87
CUX1-203ENST00000360264 PTPRHQ9HD43 1115 aa9.65□□□□□ -0.87
CUX1-203ENST00000360264 DISP2A7MBM2 1401 aa9.65□□□□□ -0.87
CUX1-203ENST00000360264 VGLL4Q14135 290 aa9.65□□□□□ -0.87
CUX1-203ENST00000360264 ACAP2Q15057 778 aa9.65□□□□□ -0.87
CUX1-203ENST00000360264 INTS6LQ5JSJ4 861 aaKnown RBP9.65□□□□□ -0.87
CUX1-203ENST00000360264 UNC5BQ8IZJ1 945 aa9.65□□□□□ -0.87
CUX1-203ENST00000360264 PDPRQ8NCN5 879 aa9.65□□□□□ -0.87
CUX1-203ENST00000360264 TRIM39Q9HCM9 518 aa9.65□□□□□ -0.87
CUX1-203ENST00000360264 OGDHLQ9ULD0 1010 aa9.65□□□□□ -0.87
CUX1-203ENST00000360264 SRRM3A6NNA2 597 aaPredicted RBP9.65□□□□□ -0.87
CUX1-203ENST00000360264 G3V2T6 193 aa9.65□□□□□ -0.87
CUX1-203ENST00000360264 CAPN15O75808 1086 aa9.65□□□□□ -0.87
CUX1-203ENST00000360264 COL6A2P12110 1019 aa9.65□□□□□ -0.87
CUX1-203ENST00000360264 ITGB3BPQ13352 177 aaPredicted RBP9.65□□□□□ -0.87
CUX1-203ENST00000360264 RIPK1Q13546 671 aa9.65□□□□□ -0.87
CUX1-203ENST00000360264 SWI5Q1ZZU3 235 aa9.65□□□□□ -0.87
CUX1-203ENST00000360264 MEIOBQ8N635 442 aa9.65□□□□□ -0.87
CUX1-203ENST00000360264 COMMD4Q9H0A8 199 aa9.65□□□□□ -0.87
CUX1-203ENST00000360264 ACSS3Q9H6R3 686 aa9.65□□□□□ -0.87
CUX1-203ENST00000360264 TFR2Q9UP52 801 aa9.65□□□□□ -0.87
CUX1-203ENST00000360264 OR5F1O95221 314 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms