RNA–Protein interactions for RNA: ENST00000360171.10

CBWD3-201, Transcript of COBW domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBWD3, Length 2,165 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-201ENST00000360171 JUNP05412 331 aaKnown RBP20.29■□□□□ 0.84
CBWD3-201ENST00000360171 HLA-DQB2P05538 268 aa20.29■□□□□ 0.84
CBWD3-201ENST00000360171 C8BP07358 591 aa20.29■□□□□ 0.84
CBWD3-201ENST00000360171 FAM58BPP0C7Q3 252 aa20.29■□□□□ 0.84
CBWD3-201ENST00000360171 ARCN1P48444 511 aaKnown RBP20.29■□□□□ 0.84
CBWD3-201ENST00000360171 CDH4P55283 916 aa20.29■□□□□ 0.84
CBWD3-201ENST00000360171 MYBPC1Q00872 1141 aa20.29■□□□□ 0.84
CBWD3-201ENST00000360171 PTK2BQ14289 1009 aa20.29■□□□□ 0.84
CBWD3-201ENST00000360171 PARP15Q460N3 678 aa20.29■□□□□ 0.84
CBWD3-201ENST00000360171 RTL10Q7L3V2 364 aa20.29■□□□□ 0.84
CBWD3-201ENST00000360171 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.29■□□□□ 0.84
CBWD3-201ENST00000360171 TTC16Q8NEE8 873 aa20.29■□□□□ 0.84
CBWD3-201ENST00000360171 TBL1YQ9BQ87 522 aa20.29■□□□□ 0.84
CBWD3-201ENST00000360171 MRPL1Q9BYD6 325 aaKnown RBP20.29■□□□□ 0.84
CBWD3-201ENST00000360171 SMG9Q9H0W8 520 aaKnown RBP20.29■□□□□ 0.84
CBWD3-201ENST00000360171 G3BP2Q9UN86 482 aaKnown RBP20.29■□□□□ 0.84
CBWD3-201ENST00000360171 MYLKQ15746 1914 aa20.29■□□□□ 0.84
CBWD3-201ENST00000360171 MIA3Q5JRA6 1907 aa20.29■□□□□ 0.84
CBWD3-201ENST00000360171 TRAV19A0A0A6YYK7 116 aa20.28■□□□□ 0.84
CBWD3-201ENST00000360171 LATS1O95835 1130 aa20.28■□□□□ 0.84
CBWD3-201ENST00000360171 C1RP00736 705 aa20.28■□□□□ 0.84
CBWD3-201ENST00000360171 ATP5F1P24539 256 aaPredicted RBP20.28■□□□□ 0.84
CBWD3-201ENST00000360171 HOXA9P31269 272 aa20.28■□□□□ 0.84
CBWD3-201ENST00000360171 NTHL1P78549 312 aa20.28■□□□□ 0.84
CBWD3-201ENST00000360171 STX5Q13190 355 aa20.28■□□□□ 0.84
CBWD3-201ENST00000360171 PDE12Q6L8Q7 609 aaKnown RBP20.28■□□□□ 0.84
CBWD3-201ENST00000360171 B3GNT6Q6ZMB0 384 aa20.28■□□□□ 0.84
CBWD3-201ENST00000360171 USP13Q92995 863 aaPredicted RBP20.28■□□□□ 0.84
CBWD3-201ENST00000360171 NXNL1Q96CM4 212 aa20.28■□□□□ 0.84
CBWD3-201ENST00000360171 CCDC126Q96EE4 140 aa20.28■□□□□ 0.84
CBWD3-201ENST00000360171 KLHL32Q96NJ5 620 aa20.28■□□□□ 0.84
CBWD3-201ENST00000360171 SP110Q9HB58 689 aa20.28■□□□□ 0.84
CBWD3-201ENST00000360171 TMCO1Q9UM00 188 aa20.28■□□□□ 0.84
CBWD3-201ENST00000360171 DMTF1Q9Y222 760 aa20.28■□□□□ 0.84
CBWD3-201ENST00000360171 C2orf16Q68DN1 1984 aa20.28■□□□□ 0.84
CBWD3-201ENST00000360171 A0A0D9SEW6 157 aa20.28■□□□□ 0.84
CBWD3-201ENST00000360171 RHOP08100 348 aa20.28■□□□□ 0.84
CBWD3-201ENST00000360171 PTPN2P17706 415 aa20.28■□□□□ 0.84
CBWD3-201ENST00000360171 SAT1P21673 171 aa20.28■□□□□ 0.84
CBWD3-201ENST00000360171 YBEYP58557 167 aaPredicted RBP20.28■□□□□ 0.84
CBWD3-201ENST00000360171 SERINC3Q13530 473 aa20.28■□□□□ 0.84
CBWD3-201ENST00000360171 TMEM259Q4ZIN3 620 aa20.28■□□□□ 0.84
CBWD3-201ENST00000360171 ZNF354CQ86Y25 554 aa20.28■□□□□ 0.84
CBWD3-201ENST00000360171 PPHLN1Q8NEY8 458 aaKnown RBP20.28■□□□□ 0.84
CBWD3-201ENST00000360171 RIN3Q8TB24 985 aa20.28■□□□□ 0.84
CBWD3-201ENST00000360171 DUS3LQ96G46 650 aaKnown RBP20.28■□□□□ 0.84
CBWD3-201ENST00000360171 HIC2Q96JB3 615 aa20.28■□□□□ 0.84
CBWD3-201ENST00000360171 RBM22Q9NW64 420 aaKnown RBP eCLIP20.28■□□□□ 0.84
CBWD3-201ENST00000360171 UBP1Q9NZI7 540 aa20.28■□□□□ 0.84
CBWD3-201ENST00000360171 CFAP97Q9P2B7 532 aa20.28■□□□□ 0.84
CBWD3-201ENST00000360171 ATXN10Q9UBB4 475 aa20.28■□□□□ 0.84
CBWD3-201ENST00000360171 GFRA2O00451 464 aa20.27■□□□□ 0.84
CBWD3-201ENST00000360171 AVPR1AP37288 418 aa20.27■□□□□ 0.84
CBWD3-201ENST00000360171 POU4F1Q01851 419 aa20.27■□□□□ 0.84
CBWD3-201ENST00000360171 TRAP1Q12931 704 aaKnown RBP20.27■□□□□ 0.84
CBWD3-201ENST00000360171 TRIM25Q14258 630 aaKnown RBP20.27■□□□□ 0.84
CBWD3-201ENST00000360171 TEAD2Q15562 447 aa20.27■□□□□ 0.84
CBWD3-201ENST00000360171 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.27■□□□□ 0.84
CBWD3-201ENST00000360171 NADK2Q4G0N4 442 aa20.27■□□□□ 0.84
CBWD3-201ENST00000360171 GPR158Q5T848 1215 aa20.27■□□□□ 0.84
CBWD3-201ENST00000360171 IRAK1BP1Q5VVH5 260 aa20.27■□□□□ 0.84
CBWD3-201ENST00000360171 RBM44Q6ZP01 1051 aaKnown RBP20.27■□□□□ 0.84
CBWD3-201ENST00000360171 CEP97Q8IW35 865 aa20.27■□□□□ 0.84
CBWD3-201ENST00000360171 AFAP1L2Q8N4X5 818 aa20.27■□□□□ 0.84
CBWD3-201ENST00000360171 C2CD4AQ8NCU7 369 aaPredicted RBP20.27■□□□□ 0.84
CBWD3-201ENST00000360171 OR7D4Q8NG98 312 aa20.27■□□□□ 0.84
CBWD3-201ENST00000360171 FATE1Q969F0 183 aa20.27■□□□□ 0.84
CBWD3-201ENST00000360171 GDF15Q99988 308 aa20.27■□□□□ 0.84
CBWD3-201ENST00000360171 GLOD4Q9HC38 313 aa20.27■□□□□ 0.84
CBWD3-201ENST00000360171 A0A1B0GVG6 124 aa20.27■□□□□ 0.83
CBWD3-201ENST00000360171 A0A1B0GVM2 712 aa20.27■□□□□ 0.83
CBWD3-201ENST00000360171 EPOPA6NHQ4 379 aa20.27■□□□□ 0.83
CBWD3-201ENST00000360171 CLDN11O75508 207 aa20.27■□□□□ 0.83
CBWD3-201ENST00000360171 ASLP04424 464 aa20.27■□□□□ 0.83
CBWD3-201ENST00000360171 PAMP19021 973 aa20.27■□□□□ 0.83
CBWD3-201ENST00000360171 ARNTP27540 789 aa20.27■□□□□ 0.83
CBWD3-201ENST00000360171 SLC10A7Q0GE19 358 aa20.27■□□□□ 0.83
CBWD3-201ENST00000360171 GALNT1Q10472 559 aaPredicted RBP20.27■□□□□ 0.83
CBWD3-201ENST00000360171 DENND5AQ6IQ26 1287 aa20.27■□□□□ 0.83
CBWD3-201ENST00000360171 KIAA0408Q6ZU52 694 aa20.27■□□□□ 0.83
CBWD3-201ENST00000360171 CHST9Q7L1S5 443 aa20.27■□□□□ 0.83
CBWD3-201ENST00000360171 MFSD6LQ8IWD5 586 aa20.27■□□□□ 0.83
CBWD3-201ENST00000360171 FAM217AQ8IXS0 508 aa20.27■□□□□ 0.83
CBWD3-201ENST00000360171 METTL25Q8N6Q8 603 aa20.27■□□□□ 0.83
CBWD3-201ENST00000360171 SPATA22Q8NHS9 363 aa20.27■□□□□ 0.83
CBWD3-201ENST00000360171 PABPC5Q96DU9 382 aaKnown RBP20.27■□□□□ 0.83
CBWD3-201ENST00000360171 CNBD2Q96M20 576 aa20.27■□□□□ 0.83
CBWD3-201ENST00000360171 ACSS2Q9NR19 701 aa20.27■□□□□ 0.83
CBWD3-201ENST00000360171 TCAF1Q9Y4C2 921 aa20.27■□□□□ 0.83
CBWD3-201ENST00000360171 PCDHGA7Q9Y5G6 932 aa20.27■□□□□ 0.83
CBWD3-201ENST00000360171 ARHGAP10A1A4S6 786 aa20.26■□□□□ 0.83
CBWD3-201ENST00000360171 HNRNPA1P09651 372 aaKnown RBP eCLIP20.26■□□□□ 0.83
CBWD3-201ENST00000360171 ZNF26P17031 533 aaPredicted RBP20.26■□□□□ 0.83
CBWD3-201ENST00000360171 HOXD9P28356 352 aaPredicted RBP20.26■□□□□ 0.83
CBWD3-201ENST00000360171 CD151P48509 253 aa20.26■□□□□ 0.83
CBWD3-201ENST00000360171 NR1H2P55055 460 aa20.26■□□□□ 0.83
CBWD3-201ENST00000360171 PSME3P61289 254 aa20.26■□□□□ 0.83
CBWD3-201ENST00000360171 GNA12Q03113 381 aa20.26■□□□□ 0.83
CBWD3-201ENST00000360171 SQLEQ14534 574 aa20.26■□□□□ 0.83
CBWD3-201ENST00000360171 KIAA0930Q6ICG6 404 aaPredicted RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms