RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 CAPN15O75808 1086 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 PRAMEF1O95521 474 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 NTRK1P04629 796 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 PEPDP12955 493 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 TUBP50607 506 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 MAB21L1Q13394 359 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 STXBP5Q5T5C0 1151 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 GJD3Q8N144 294 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 ZNF781Q8N8C0 355 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 CHST13Q8NET6 341 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 CLHC1Q8NHS4 586 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 NKD2Q969F2 451 aaPredicted RBP8.75□□□□□ -1.01
COL6A6-201ENST00000358511 UBE2E3Q969T4 207 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 S100A13Q99584 98 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 VPS28Q9UK41 221 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 ENTPD4Q9Y227 616 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 TMEM131LA2VDJ0 1609 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 OR6C70A6NIJ9 312 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 ZW10O43264 779 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 OGNP20774 298 aaKnown RBP8.74□□□□□ -1.01
COL6A6-201ENST00000358511 TAS2R40P59535 323 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 DEFA5Q01523 94 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 NFIAQ12857 509 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 TOMM20Q15388 145 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 EIF2S3LQ2VIR3 472 aaKnown RBP8.74□□□□□ -1.01
COL6A6-201ENST00000358511 ANKRD23Q86SG2 305 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 ASCC1Q8N9N2 400 aaKnown RBP8.74□□□□□ -1.01
COL6A6-201ENST00000358511 ATL1Q8WXF7 558 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 COPS4Q9BT78 406 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 DNAJC11Q9NVH1 559 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 ZNF232Q9UNY5 417 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 UBR1Q8IWV7 1749 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 COLEC12Q5KU26 742 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 SLITRK4Q8IW52 837 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 RFKQ969G6 155 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 FEM1AQ9BSK4 669 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 POLR1EQ9GZS1 481 aaKnown RBP8.74□□□□□ -1.01
COL6A6-201ENST00000358511 OR56A5P0C7T3 313 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 AOC1P19801 751 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 SLC26A2P50443 739 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 CYP4V2Q6ZWL3 525 aaPredicted RBP8.74□□□□□ -1.01
COL6A6-201ENST00000358511 ADGRA1Q86SQ6 560 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 FNDC11Q9BVV2 318 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 FFAR3O14843 346 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 GPR42O15529 346 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 DYRK3O43781 588 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 YBX3P16989 372 aaKnown RBP eCLIP8.74□□□□□ -1.01
COL6A6-201ENST00000358511 EIF2B5Q13144 721 aaKnown RBP8.74□□□□□ -1.01
COL6A6-201ENST00000358511 BOP1Q14137 746 aaKnown RBP8.74□□□□□ -1.01
COL6A6-201ENST00000358511 MGAT5BQ3V5L5 792 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 VPS26BQ4G0F5 336 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 ELMOD2Q8IZ81 293 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 ELMO1Q92556 727 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 MTFMTQ96DP5 389 aaKnown RBP8.74□□□□□ -1.01
COL6A6-201ENST00000358511 DCSTAMPQ9H295 470 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 FBXO44Q9H4M3 255 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 ERVK-11Q9UQG0 969 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 SLC2A2P11168 524 aaPredicted RBP8.74□□□□□ -1.01
COL6A6-201ENST00000358511 ERP29P30040 261 aaKnown RBP8.74□□□□□ -1.01
COL6A6-201ENST00000358511 USF2Q15853 346 aaPredicted RBP8.74□□□□□ -1.01
COL6A6-201ENST00000358511 ARL13AQ5H913 290 aaPredicted RBP8.74□□□□□ -1.01
COL6A6-201ENST00000358511 PIK3R6Q5UE93 754 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 HMBOX1Q6NT76 420 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 GPR180Q86V85 440 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 SERPINB11Q96P15 392 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 TUBA1CQ9BQE3 449 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 KCNMB3Q9NPA1 279 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 CBX4O00257 560 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 ZBTB14O43829 449 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 MMP10P09238 476 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 F8A1P23610 371 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 PTGIRP43119 386 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 EFEMP1Q12805 493 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 MTAPQ13126 283 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 NIPA1Q7RTP0 329 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 TFAP2DQ7Z6R9 452 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 CKLFQ9UBR5 152 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 MST1RQ04912 1400 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 FAM155BO75949 473 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 CD36P16671 472 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 S100A2P29034 98 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 PITPNAQ00169 270 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 GRSF1Q12849 480 aaKnown RBP eCLIP8.74□□□□□ -1.01
COL6A6-201ENST00000358511 ZNF484Q5JVG2 852 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 GLB1LQ6UWU2 654 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 TXNRD3Q86VQ6 643 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 INO80EQ8NBZ0 244 aaPredicted RBP8.74□□□□□ -1.01
COL6A6-201ENST00000358511 OR52K2Q8NGK3 314 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 USP7Q93009 1102 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 OR12D3Q9UGF7 316 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 FADS2P1A8MWK0 482 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 H7C2Y5 167 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 RAP2AP10114 183 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 ITGB6P18564 788 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 TMBIM6P55061 237 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 RHOAP61586 193 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 PEX6Q13608 980 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 ZNF181Q2M3W8 571 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 AFTPHQ6ULP2 937 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 SLC30A2Q9BRI3 323 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms