RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 RBM22Q9NW64 420 aaKnown RBP eCLIP8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 DUS2Q9NX74 493 aaKnown RBP8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 CNOT11Q9UKZ1 510 aaKnown RBP8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 SPEF1Q9Y4P9 236 aa8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 SHROOM3Q8TF72 1996 aa8.23□□□□□ -1.09
CDC42SE1-201ENST00000357235 OR51F1A6NGY5 319 aa8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 LRRC14BA6NHZ5 514 aa8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 TARM1B6A8C7 271 aa8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 CCRL2O00421 344 aa8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 TNPO2O14787 897 aaKnown RBP8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 MTSS1O43312 755 aa8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 B4GAT1O43505 415 aa8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 CRCPO75575 148 aa8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 CLPXO76031 633 aa8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 STAU1O95793 577 aaKnown RBP8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 PRKCAP17252 672 aa8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 PAMP19021 973 aa8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 CCNA2P20248 432 aa8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 FASP25445 335 aa8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 KPNA2P52292 529 aaKnown RBP8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 PRKAA2P54646 552 aa8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 LILRA4P59901 499 aa8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 ARHGAP1Q07960 439 aa8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 MERTKQ12866 999 aa8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 NFATC3Q12968 1075 aa8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 PMS2P3Q13401 168 aa8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 DCAF4L1Q3SXM0 396 aa8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 CDONQ4KMG0 1287 aa8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 NHSL2Q5HYW2 709 aa8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 LDLRAP1Q5SW96 308 aa8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 RETREG3Q86VR2 466 aa8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 CAMK1DQ8IU85 385 aa8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 GALNT13Q8IUC8 556 aa8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 ZC3H7AQ8IWR0 971 aaKnown RBP8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 ANKRD49Q8WVL7 239 aa8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 ZNF347Q96SE7 839 aa8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 KIFC1Q9BW19 673 aa8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 ANKRD60Q9BZ19 345 aa8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 DNAI2Q9GZS0 605 aa8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 MUC3BQ9H195 1237 aa8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 ZMAT5Q9UDW3 170 aaKnown RBP8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 GTF2IRD1Q9UHL9 959 aa8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 AAR2Q9Y312 384 aaKnown RBP8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 PCDHGA8Q9Y5G5 932 aa8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 MYBPHLA2RUH7 354 aa8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 H3BMM5 538 aa8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 NME4O00746 187 aa8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 TRIM24O15164 1050 aa8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 NPHS1O60500 1241 aa8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 ALX3O95076 343 aa8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 KRT6AP02538 564 aa8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 KRT6BP04259 564 aa8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 ARNTP27540 789 aa8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 HPCAL1P37235 193 aa8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 HK2P52789 917 aa8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 FRG1Q14331 258 aaKnown RBP8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 INPP5AQ14642 412 aa8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 ZNF846Q147U1 533 aa8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 ATAD3BQ5T9A4 648 aa8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 SCIMPQ6UWF3 145 aa8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 PELI3Q8N2H9 469 aa8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 GABPB2Q8TAK5 448 aaPredicted RBP8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 TFAP2CQ92754 450 aa8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 VPS33AQ96AX1 596 aa8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 C19orf60Q96EN9 201 aa8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 KCNA7Q96RP8 456 aa8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 ADNPQ9H2P0 1102 aa8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 NOL6Q9H6R4 1146 aaKnown RBP8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 WDR6Q9NNW5 1121 aaKnown RBP8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 MID1IP1Q9NPA3 183 aa8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 PTBP2Q9UKA9 531 aaKnown RBP8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 FBXW11Q9UKB1 542 aa8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 FNDC3AQ9Y2H6 1198 aaKnown RBP8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 MCM3APO60318 1980 aa8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 ANK1P16157 1881 aa8.22□□□□□ -1.09
CDC42SE1-201ENST00000357235 TCRBV3S1A0A5B6 114 aa8.21□□□□□ -1.09
CDC42SE1-201ENST00000357235 FAM172BPA6NC97 362 aa8.21□□□□□ -1.09
CDC42SE1-201ENST00000357235 CLDN25C9JDP6 229 aa8.21□□□□□ -1.09
CDC42SE1-201ENST00000357235 H0YJX3 145 aa8.21□□□□□ -1.09
CDC42SE1-201ENST00000357235 UBFD1O14562 309 aaKnown RBP8.21□□□□□ -1.09
CDC42SE1-201ENST00000357235 NUAK1O60285 661 aa8.21□□□□□ -1.09
CDC42SE1-201ENST00000357235 CD4P01730 458 aa8.21□□□□□ -1.09
CDC42SE1-201ENST00000357235 LINC00032P0C843 101 aa8.21□□□□□ -1.09
CDC42SE1-201ENST00000357235 HSPA1AP0DMV8 641 aaKnown RBP8.21□□□□□ -1.09
CDC42SE1-201ENST00000357235 HSPA1BP0DMV9 641 aaKnown RBP8.21□□□□□ -1.09
CDC42SE1-201ENST00000357235 S100A5P33763 92 aa8.21□□□□□ -1.09
CDC42SE1-201ENST00000357235 P2RX3P56373 397 aa8.21□□□□□ -1.09
CDC42SE1-201ENST00000357235 OCA2Q04671 838 aa8.21□□□□□ -1.09
CDC42SE1-201ENST00000357235 CACNB2Q08289 660 aaPredicted RBP8.21□□□□□ -1.09
CDC42SE1-201ENST00000357235 DNASE1L3Q13609 305 aa8.21□□□□□ -1.09
CDC42SE1-201ENST00000357235 SMU1Q2TAY7 513 aa8.21□□□□□ -1.09
CDC42SE1-201ENST00000357235 PPP4R4Q6NUP7 873 aa8.21□□□□□ -1.09
CDC42SE1-201ENST00000357235 MAMDC4Q6UXC1 1216 aa8.21□□□□□ -1.09
CDC42SE1-201ENST00000357235 ERMP1Q7Z2K6 904 aa8.21□□□□□ -1.09
CDC42SE1-201ENST00000357235 ERO1BQ86YB8 467 aa8.21□□□□□ -1.09
CDC42SE1-201ENST00000357235 ELMOD2Q8IZ81 293 aa8.21□□□□□ -1.09
CDC42SE1-201ENST00000357235 DCBLD1Q8N8Z6 715 aa8.21□□□□□ -1.09
CDC42SE1-201ENST00000357235 DCPSQ96C86 337 aaKnown RBP8.21□□□□□ -1.09
CDC42SE1-201ENST00000357235 RMND5AQ9H871 391 aa8.21□□□□□ -1.09
CDC42SE1-201ENST00000357235 AKTIPQ9H8T0 292 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms