RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 GPR135Q8IZ08 494 aa13.18□□□□□ -0.3
SCN8A-202ENST00000355133 UPF1Q92900 1129 aaKnown RBP eCLIP13.18□□□□□ -0.3
SCN8A-202ENST00000355133 KCTD5Q9NXV2 234 aa13.18□□□□□ -0.3
SCN8A-202ENST00000355133 TBC1D14Q9P2M4 693 aa13.18□□□□□ -0.3
SCN8A-202ENST00000355133 MAP2K7O14733 419 aa13.18□□□□□ -0.3
SCN8A-202ENST00000355133 NUDT17P0C025 328 aa13.18□□□□□ -0.3
SCN8A-202ENST00000355133 HNMTP50135 292 aa13.18□□□□□ -0.3
SCN8A-202ENST00000355133 SLC7A2P52569 658 aa13.18□□□□□ -0.3
SCN8A-202ENST00000355133 GBE1Q04446 702 aa13.18□□□□□ -0.3
SCN8A-202ENST00000355133 PDK3Q15120 406 aa13.18□□□□□ -0.3
SCN8A-202ENST00000355133 KLHL35Q6PF15 583 aa13.18□□□□□ -0.3
SCN8A-202ENST00000355133 RTL3Q8N8U3 475 aaKnown RBP13.18□□□□□ -0.3
SCN8A-202ENST00000355133 HEXDCQ8WVB3 486 aa13.18□□□□□ -0.3
SCN8A-202ENST00000355133 MCRS1Q96EZ8 462 aa13.18□□□□□ -0.3
SCN8A-202ENST00000355133 WDR55Q9H6Y2 383 aaPredicted RBP13.18□□□□□ -0.3
SCN8A-202ENST00000355133 R3HDM2Q9Y2K5 976 aaKnown RBP13.18□□□□□ -0.3
SCN8A-202ENST00000355133 RPTORQ8N122 1335 aa13.18□□□□□ -0.3
SCN8A-202ENST00000355133 PRMT5O14744 637 aaPredicted RBP13.18□□□□□ -0.3
SCN8A-202ENST00000355133 TFPIP10646 304 aa13.18□□□□□ -0.3
SCN8A-202ENST00000355133 PKMP14618 531 aaKnown RBP13.18□□□□□ -0.3
SCN8A-202ENST00000355133 CCNYL2Q5T2Q4 361 aa13.18□□□□□ -0.3
SCN8A-202ENST00000355133 C12orf56Q8IXR9 622 aa13.18□□□□□ -0.3
SCN8A-202ENST00000355133 BEND7Q8N7W2 519 aaPredicted RBP13.18□□□□□ -0.3
SCN8A-202ENST00000355133 SLC9A7Q96T83 725 aa13.18□□□□□ -0.3
SCN8A-202ENST00000355133 GAS2L1Q99501 681 aaPredicted RBP13.18□□□□□ -0.3
SCN8A-202ENST00000355133 AIF1LQ9BQI0 150 aa13.18□□□□□ -0.3
SCN8A-202ENST00000355133 HMG20AQ9NP66 347 aa13.18□□□□□ -0.3
SCN8A-202ENST00000355133 CHRAC1Q9NRG0 131 aa13.18□□□□□ -0.3
SCN8A-202ENST00000355133 SH3GLB1Q9Y371 365 aa13.18□□□□□ -0.3
SCN8A-202ENST00000355133 SCAMP1O15126 338 aa13.18□□□□□ -0.3
SCN8A-202ENST00000355133 IDH3BO43837 385 aa13.18□□□□□ -0.3
SCN8A-202ENST00000355133 ECDO95905 644 aaPredicted RBP13.18□□□□□ -0.3
SCN8A-202ENST00000355133 ALAS2P22557 587 aa13.18□□□□□ -0.3
SCN8A-202ENST00000355133 MMP8P22894 467 aa13.18□□□□□ -0.3
SCN8A-202ENST00000355133 MSX2P35548 267 aaPredicted RBP13.18□□□□□ -0.3
SCN8A-202ENST00000355133 PTDSS1P48651 473 aaKnown RBP13.18□□□□□ -0.3
SCN8A-202ENST00000355133 PEX6Q13608 980 aa13.18□□□□□ -0.3
SCN8A-202ENST00000355133 KRT74Q7RTS7 529 aa13.18□□□□□ -0.3
SCN8A-202ENST00000355133 C4orf32Q8N8J7 132 aa13.18□□□□□ -0.3
SCN8A-202ENST00000355133 NEK6Q9HC98 313 aa13.18□□□□□ -0.3
SCN8A-202ENST00000355133 LRRC4CQ9HCJ2 640 aa13.18□□□□□ -0.3
SCN8A-202ENST00000355133 OR2AG2A6NM03 316 aa13.17□□□□□ -0.3
SCN8A-202ENST00000355133 CCL22O00626 93 aa13.17□□□□□ -0.3
SCN8A-202ENST00000355133 SNUPNO95149 360 aaKnown RBP13.17□□□□□ -0.3
SCN8A-202ENST00000355133 SPAM1P38567 509 aa13.17□□□□□ -0.3
SCN8A-202ENST00000355133 NR1D2Q14995 579 aa13.17□□□□□ -0.3
SCN8A-202ENST00000355133 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.17□□□□□ -0.3
SCN8A-202ENST00000355133 COQ7Q99807 217 aa13.17□□□□□ -0.3
SCN8A-202ENST00000355133 PRRG4Q9BZD6 226 aa13.17□□□□□ -0.3
SCN8A-202ENST00000355133 SNX10Q9Y5X0 201 aa13.17□□□□□ -0.3
SCN8A-202ENST00000355133 A0A0J9YYE9 177 aa13.17□□□□□ -0.3
SCN8A-202ENST00000355133 H3BNH8 94 aa13.17□□□□□ -0.3
SCN8A-202ENST00000355133 VIPP01282 170 aa13.17□□□□□ -0.3
SCN8A-202ENST00000355133 DRD4P21917 467 aa13.17□□□□□ -0.3
SCN8A-202ENST00000355133 PYDC2Q56P42 97 aa13.17□□□□□ -0.3
SCN8A-202ENST00000355133 FBXO48Q5FWF7 155 aa13.17□□□□□ -0.3
SCN8A-202ENST00000355133 ZDHHC20Q5W0Z9 365 aa13.17□□□□□ -0.3
SCN8A-202ENST00000355133 MREGQ8N565 214 aa13.17□□□□□ -0.3
SCN8A-202ENST00000355133 C1orf127Q8N9H9 656 aa13.17□□□□□ -0.3
SCN8A-202ENST00000355133 DQX1Q8TE96 717 aaKnown RBP13.17□□□□□ -0.3
SCN8A-202ENST00000355133 RHOBTB2Q9BYZ6 727 aa13.17□□□□□ -0.3
SCN8A-202ENST00000355133 ROBO3Q96MS0 1386 aa13.17□□□□□ -0.3
SCN8A-202ENST00000355133 FSBPO95073 299 aa13.17□□□□□ -0.3
SCN8A-202ENST00000355133 NFATC1O95644 943 aa13.17□□□□□ -0.3
SCN8A-202ENST00000355133 PTPN9P43378 593 aa13.17□□□□□ -0.3
SCN8A-202ENST00000355133 NEK5Q6P3R8 708 aa13.17□□□□□ -0.3
SCN8A-202ENST00000355133 CCDC185Q8N715 623 aa13.17□□□□□ -0.3
SCN8A-202ENST00000355133 GPR21Q99679 349 aa13.17□□□□□ -0.3
SCN8A-202ENST00000355133 DNAJC11Q9NVH1 559 aa13.17□□□□□ -0.3
SCN8A-202ENST00000355133 U3KQV3 271 aa13.17□□□□□ -0.3
SCN8A-202ENST00000355133 ARL5CA6NH57 179 aa13.17□□□□□ -0.3
SCN8A-202ENST00000355133 PGM3O95394 542 aa13.17□□□□□ -0.3
SCN8A-202ENST00000355133 C2P06681 752 aa13.17□□□□□ -0.3
SCN8A-202ENST00000355133 BPGMP07738 259 aa13.17□□□□□ -0.3
SCN8A-202ENST00000355133 ZNF132P52740 706 aa13.17□□□□□ -0.3
SCN8A-202ENST00000355133 RFX4Q33E94 735 aa13.17□□□□□ -0.3
SCN8A-202ENST00000355133 FUT10Q6P4F1 479 aa13.17□□□□□ -0.3
SCN8A-202ENST00000355133 PTCHD4Q6ZW05 846 aa13.17□□□□□ -0.3
SCN8A-202ENST00000355133 TRABD2AQ86V40 505 aa13.17□□□□□ -0.3
SCN8A-202ENST00000355133 FAM129CQ86XR2 697 aa13.17□□□□□ -0.3
SCN8A-202ENST00000355133 C7orf61Q8IZ16 206 aa13.17□□□□□ -0.3
SCN8A-202ENST00000355133 NXNL1Q96CM4 212 aa13.17□□□□□ -0.3
SCN8A-202ENST00000355133 MCCC1Q96RQ3 725 aaPredicted RBP13.17□□□□□ -0.3
SCN8A-202ENST00000355133 NDRG2Q9UN36 371 aaKnown RBP13.17□□□□□ -0.3
SCN8A-202ENST00000355133 FCF1Q9Y324 198 aaKnown RBP13.17□□□□□ -0.3
SCN8A-202ENST00000355133 DDX3YO15523 660 aaKnown RBP13.17□□□□□ -0.3
SCN8A-202ENST00000355133 ZBTB11O95625 1053 aaPredicted RBP13.17□□□□□ -0.3
SCN8A-202ENST00000355133 SMPD1P17405 629 aa13.17□□□□□ -0.3
SCN8A-202ENST00000355133 NELFEP18615 380 aaKnown RBP13.17□□□□□ -0.3
SCN8A-202ENST00000355133 STAT5AP42229 794 aa13.17□□□□□ -0.3
SCN8A-202ENST00000355133 NAIF1Q69YI7 327 aaPredicted RBP13.17□□□□□ -0.3
SCN8A-202ENST00000355133 MZT2BQ6NZ67 158 aa13.17□□□□□ -0.3
SCN8A-202ENST00000355133 LBX2Q6XYB7 198 aa13.17□□□□□ -0.3
SCN8A-202ENST00000355133 PYROXD2Q8N2H3 581 aa13.17□□□□□ -0.3
SCN8A-202ENST00000355133 NARS2Q96I59 477 aaKnown RBP13.17□□□□□ -0.3
SCN8A-202ENST00000355133 ATG10Q9H0Y0 220 aa13.17□□□□□ -0.3
SCN8A-202ENST00000355133 INTS7Q9NVH2 962 aaKnown RBP13.17□□□□□ -0.3
SCN8A-202ENST00000355133 DUS2Q9NX74 493 aaKnown RBP13.17□□□□□ -0.3
SCN8A-202ENST00000355133 ADGRE2Q9UHX3 823 aa13.17□□□□□ -0.3
SCN8A-202ENST00000355133 CNOT6Q9ULM6 557 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms