RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 PSMB9P28065 219 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 GRK3P35626 688 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 INPP5AQ14642 412 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 LRRC26Q2I0M4 334 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 C6orf141Q5SZD1 244 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 STRIP1Q5VSL9 837 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 RIOX2Q8IUF8 465 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 CHDHQ8NE62 594 aaPredicted RBP10.62□□□□□ -0.71
CAPN3-203ENST00000349748 SLC7A14Q8TBB6 771 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 LGALS12Q96DT0 336 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 ZHX1-C8orf76Q96EF9 292 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 SLC45A3Q96JT2 553 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 STRA6Q9BX79 667 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 ZBTB20Q9HC78 741 aaPredicted RBP10.62□□□□□ -0.71
CAPN3-203ENST00000349748 HPS4Q9NQG7 708 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 FAM105AQ9NUU6 356 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 EHD3Q9NZN3 535 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 E5RI56 91 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 SLC22A2O15244 555 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 INPP4BO15327 924 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 CAPN5O15484 640 aaPredicted RBP10.62□□□□□ -0.71
CAPN3-203ENST00000349748 TSC22D2O75157 780 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 C7P10643 843 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 TAL1P17542 331 aaPredicted RBP10.62□□□□□ -0.71
CAPN3-203ENST00000349748 ITGALP20701 1170 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 ALAS2P22557 587 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 IL12RB1P42701 662 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 NPY2RP49146 381 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 DEFA1P59665 94 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 DEFA3P59666 94 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 IRF9Q00978 393 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 CXCL9Q07325 125 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 GALEQ14376 348 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 CYP51A1Q16850 503 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 BTBD16Q32M84 506 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 RBM48Q5RL73 367 aaKnown RBP10.62□□□□□ -0.71
CAPN3-203ENST00000349748 TPRG1LQ5T0D9 272 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 XXYLT1Q8NBI6 393 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 OR7D4Q8NG98 312 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 VANGL1Q8TAA9 524 aaPredicted RBP10.62□□□□□ -0.71
CAPN3-203ENST00000349748 ZFAND1Q8TCF1 268 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 PCNPQ8WW12 178 aaKnown RBP10.62□□□□□ -0.71
CAPN3-203ENST00000349748 LRRC39Q96DD0 335 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 DNAI2Q9GZS0 605 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 NUAK2Q9H093 628 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 DHX35Q9H5Z1 703 aaKnown RBP10.62□□□□□ -0.71
CAPN3-203ENST00000349748 BRD7Q9NPI1 651 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 OSGIN1Q9UJX0 560 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 BTBD3Q9Y2F9 522 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 SNX8Q9Y5X2 465 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 MN1Q10571 1320 aaPredicted RBP10.62□□□□□ -0.71
CAPN3-203ENST00000349748 TANC1Q9C0D5 1861 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 IGKV6D-41A0A0C4DH26 115 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 MEIOCA2RUB1 952 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 ZBTB5O15062 677 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 CHADO15335 359 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 TRIM13O60858 407 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 RNGTTO60942 597 aaKnown RBP10.62□□□□□ -0.71
CAPN3-203ENST00000349748 PEX14O75381 377 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 SRP72O76094 671 aaKnown RBP10.62□□□□□ -0.71
CAPN3-203ENST00000349748 DNTTP04053 509 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 TCF3P15923 654 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 DNAJB2P25686 324 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 PTPN7P35236 360 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 CENPAP49450 140 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 SLC12A2P55011 1212 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 ROR1Q01973 937 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 SEMA3AQ14563 771 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 ZNF404Q494X3 552 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 GPAT3Q53EU6 434 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 GARNL3Q5VVW2 1013 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 LAIR2Q6ISS4 152 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 CASC4Q6P4E1 433 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 NECAB2Q7Z6G3 386 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 CCNYL1Q8N7R7 359 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 ZNF557Q8N988 423 aaPredicted RBP10.62□□□□□ -0.71
CAPN3-203ENST00000349748 MYRFLQ96LU7 910 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 WACQ9BTA9 647 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 ZNF556Q9HAH1 456 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 DDX4Q9NQI0 724 aaKnown RBP10.62□□□□□ -0.71
CAPN3-203ENST00000349748 ZNF224Q9NZL3 707 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 SLC9A2Q9UBY0 812 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 CYB5R1Q9UHQ9 305 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 KCNE2Q9Y6J6 123 aa10.62□□□□□ -0.71
CAPN3-203ENST00000349748 CLRN2A0PK11 232 aa10.61□□□□□ -0.71
CAPN3-203ENST00000349748 TRPC5OSA6NMA1 111 aa10.61□□□□□ -0.71
CAPN3-203ENST00000349748 PLA2G6O60733 806 aa10.61□□□□□ -0.71
CAPN3-203ENST00000349748 RFC2P35250 354 aa10.61□□□□□ -0.71
CAPN3-203ENST00000349748 CRKP46108 304 aa10.61□□□□□ -0.71
CAPN3-203ENST00000349748 PRELPP51888 382 aa10.61□□□□□ -0.71
CAPN3-203ENST00000349748 PGGT1BP53609 377 aa10.61□□□□□ -0.71
CAPN3-203ENST00000349748 GABPAQ06546 454 aa10.61□□□□□ -0.71
CAPN3-203ENST00000349748 FAPQ12884 760 aa10.61□□□□□ -0.71
CAPN3-203ENST00000349748 MFSD10Q14728 455 aa10.61□□□□□ -0.71
CAPN3-203ENST00000349748 PLA2G4EQ3MJ16 856 aa10.61□□□□□ -0.71
CAPN3-203ENST00000349748 GPATCH4Q5T3I0 446 aaKnown RBP10.61□□□□□ -0.71
CAPN3-203ENST00000349748 PNCKQ6P2M8 343 aa10.61□□□□□ -0.71
CAPN3-203ENST00000349748 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.61□□□□□ -0.71
CAPN3-203ENST00000349748 ANKS3Q6ZW76 656 aa10.61□□□□□ -0.71
CAPN3-203ENST00000349748 RBM23Q86U06 439 aaKnown RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms