RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 SLC22A16Q86VW1 577 aa18.02■□□□□ 0.48
SMC4-201ENST00000344722 TTC29Q8NA56 475 aaPredicted RBP18.02■□□□□ 0.48
SMC4-201ENST00000344722 OR5K1Q8NHB7 308 aa18.02■□□□□ 0.48
SMC4-201ENST00000344722 ELMO1Q92556 727 aa18.02■□□□□ 0.48
SMC4-201ENST00000344722 GLT1D1Q96MS3 346 aa18.02■□□□□ 0.48
SMC4-201ENST00000344722 SPATA5L1Q9BVQ7 753 aa18.02■□□□□ 0.48
SMC4-201ENST00000344722 TIMM13Q9Y5L4 95 aaPredicted RBP18.02■□□□□ 0.48
SMC4-201ENST00000344722 SGTAO43765 313 aa18.02■□□□□ 0.47
SMC4-201ENST00000344722 KHDRBS3O75525 346 aaKnown RBP18.02■□□□□ 0.47
SMC4-201ENST00000344722 VSIG10LQ86VR7 867 aa18.02■□□□□ 0.47
SMC4-201ENST00000344722 ZNF614Q8N883 585 aa18.02■□□□□ 0.47
SMC4-201ENST00000344722 PIGUQ9H490 435 aa18.02■□□□□ 0.47
SMC4-201ENST00000344722 CHRAC1Q9NRG0 131 aa18.02■□□□□ 0.47
SMC4-201ENST00000344722 EXD2Q9NVH0 621 aa18.02■□□□□ 0.47
SMC4-201ENST00000344722 MKL2Q9ULH7 1088 aa18.02■□□□□ 0.47
SMC4-201ENST00000344722 GSAPA4D1B5 854 aa18.01■□□□□ 0.47
SMC4-201ENST00000344722 ARHGEF33A8MVX0 844 aa18.01■□□□□ 0.47
SMC4-201ENST00000344722 PGRMC2O15173 223 aa18.01■□□□□ 0.47
SMC4-201ENST00000344722 MAFO75444 373 aaPredicted RBP18.01■□□□□ 0.47
SMC4-201ENST00000344722 PGLSO95336 258 aa18.01■□□□□ 0.47
SMC4-201ENST00000344722 RBM20Q5T481 1227 aaKnown RBP18.01■□□□□ 0.47
SMC4-201ENST00000344722 RIOX2Q8IUF8 465 aa18.01■□□□□ 0.47
SMC4-201ENST00000344722 SMG8Q8ND04 991 aaKnown RBP18.01■□□□□ 0.47
SMC4-201ENST00000344722 KCTD15Q96SI1 283 aaPredicted RBP18.01■□□□□ 0.47
SMC4-201ENST00000344722 OSMRQ99650 979 aa18.01■□□□□ 0.47
SMC4-201ENST00000344722 SH3PXD2BA1X283 911 aa18.01■□□□□ 0.47
SMC4-201ENST00000344722 ZW10O43264 779 aa18.01■□□□□ 0.47
SMC4-201ENST00000344722 PORP16435 677 aaPredicted RBP18.01■□□□□ 0.47
SMC4-201ENST00000344722 APOBEC3HQ6NTF7 200 aaKnown RBP18.01■□□□□ 0.47
SMC4-201ENST00000344722 RETSATQ6NUM9 610 aa18.01■□□□□ 0.47
SMC4-201ENST00000344722 PRR23CQ6ZRP0 262 aa18.01■□□□□ 0.47
SMC4-201ENST00000344722 GBA3Q9H227 469 aa18.01■□□□□ 0.47
SMC4-201ENST00000344722 LYVE1Q9Y5Y7 322 aa18.01■□□□□ 0.47
SMC4-201ENST00000344722 CCRL2O00421 344 aa18.01■□□□□ 0.47
SMC4-201ENST00000344722 DLDP09622 509 aaKnown RBP18.01■□□□□ 0.47
SMC4-201ENST00000344722 GPX6P59796 221 aa18.01■□□□□ 0.47
SMC4-201ENST00000344722 MRPS5P82675 430 aaKnown RBP18.01■□□□□ 0.47
SMC4-201ENST00000344722 EVX2Q03828 476 aa18.01■□□□□ 0.47
SMC4-201ENST00000344722 CCNIQ14094 377 aa18.01■□□□□ 0.47
SMC4-201ENST00000344722 TMEM53Q6P2H8 277 aa18.01■□□□□ 0.47
SMC4-201ENST00000344722 TRIM40Q6P9F5 258 aa18.01■□□□□ 0.47
SMC4-201ENST00000344722 FSTL5Q8N475 847 aaPredicted RBP18.01■□□□□ 0.47
SMC4-201ENST00000344722 IRF2BPLQ9H1B7 796 aa18.01■□□□□ 0.47
SMC4-201ENST00000344722 SLC9A8Q9Y2E8 581 aa18.01■□□□□ 0.47
SMC4-201ENST00000344722 MFSD11O43934 449 aa18.01■□□□□ 0.47
SMC4-201ENST00000344722 SNHG28P0DPA3 235 aa18.01■□□□□ 0.47
SMC4-201ENST00000344722 TRMT10BQ6PF06 316 aaKnown RBP18.01■□□□□ 0.47
SMC4-201ENST00000344722 LCLAT1Q6UWP7 414 aa18.01■□□□□ 0.47
SMC4-201ENST00000344722 NIPA2Q8N8Q9 360 aa18.01■□□□□ 0.47
SMC4-201ENST00000344722 OR52L1Q8NGH7 329 aa18.01■□□□□ 0.47
SMC4-201ENST00000344722 SLC22A4Q9H015 551 aa18.01■□□□□ 0.47
SMC4-201ENST00000344722 CDT1Q9H211 546 aa18.01■□□□□ 0.47
SMC4-201ENST00000344722 GLOD4Q9HC38 313 aa18.01■□□□□ 0.47
SMC4-201ENST00000344722 GPN1Q9HCN4 374 aaPredicted RBP18.01■□□□□ 0.47
SMC4-201ENST00000344722 SLC15A5A6NIM6 579 aa18■□□□□ 0.47
SMC4-201ENST00000344722 BUD23O43709 281 aaKnown RBP18■□□□□ 0.47
SMC4-201ENST00000344722 MAPKAPK2P49137 400 aa18■□□□□ 0.47
SMC4-201ENST00000344722 PTPN5P54829 565 aa18■□□□□ 0.47
SMC4-201ENST00000344722 MEIOBQ8N635 442 aa18■□□□□ 0.47
SMC4-201ENST00000344722 LINGO1Q96FE5 620 aa18■□□□□ 0.47
SMC4-201ENST00000344722 COLEC11Q9BWP8 271 aa18■□□□□ 0.47
SMC4-201ENST00000344722 ABCB9Q9NP78 766 aa18■□□□□ 0.47
SMC4-201ENST00000344722 OXSMQ9NWU1 459 aa18■□□□□ 0.47
SMC4-201ENST00000344722 OAZ3Q9UMX2 235 aa18■□□□□ 0.47
SMC4-201ENST00000344722 CDH1P12830 882 aa18■□□□□ 0.47
SMC4-201ENST00000344722 AZGP1P25311 298 aaKnown RBP18■□□□□ 0.47
SMC4-201ENST00000344722 RPS12P25398 132 aaKnown RBP18■□□□□ 0.47
SMC4-201ENST00000344722 RHDQ02161 417 aa18■□□□□ 0.47
SMC4-201ENST00000344722 LCP2Q13094 533 aa18■□□□□ 0.47
SMC4-201ENST00000344722 SNAPC2Q13487 334 aa18■□□□□ 0.47
SMC4-201ENST00000344722 SEMA5AQ13591 1074 aa18■□□□□ 0.47
SMC4-201ENST00000344722 COLEC12Q5KU26 742 aa18■□□□□ 0.47
SMC4-201ENST00000344722 PPP1R26Q5T8A7 1209 aaPredicted RBP18■□□□□ 0.47
SMC4-201ENST00000344722 XKR5Q6UX68 686 aa18■□□□□ 0.47
SMC4-201ENST00000344722 CANT1Q8WVQ1 401 aa18■□□□□ 0.47
SMC4-201ENST00000344722 PSIP1O75475 530 aaKnown RBP18■□□□□ 0.47
SMC4-201ENST00000344722 CTXN3Q4LDR2 81 aa18■□□□□ 0.47
SMC4-201ENST00000344722 C2orf69Q8N8R5 385 aa18■□□□□ 0.47
SMC4-201ENST00000344722 MFHAS1Q9Y4C4 1052 aa18■□□□□ 0.47
SMC4-201ENST00000344722 TYROBPO43914 113 aa18■□□□□ 0.47
SMC4-201ENST00000344722 CYP7B1O75881 506 aa18■□□□□ 0.47
SMC4-201ENST00000344722 MBL2P11226 248 aaPredicted RBP18■□□□□ 0.47
SMC4-201ENST00000344722 WNT3AP56704 352 aa18■□□□□ 0.47
SMC4-201ENST00000344722 GRIK4Q16099 956 aa18■□□□□ 0.47
SMC4-201ENST00000344722 UGCGQ16739 394 aa18■□□□□ 0.47
SMC4-201ENST00000344722 AP5B1Q2VPB7 878 aa18■□□□□ 0.47
SMC4-201ENST00000344722 PITRM1Q5JRX3 1037 aa18■□□□□ 0.47
SMC4-201ENST00000344722 C15orf52Q6ZUT6 534 aaKnown RBP18■□□□□ 0.47
SMC4-201ENST00000344722 TEX47Q8TBZ9 253 aa18■□□□□ 0.47
SMC4-201ENST00000344722 PHF24Q9UPV7 400 aa18■□□□□ 0.47
SMC4-201ENST00000344722 PPP1R11O60927 126 aaPredicted RBP17.99■□□□□ 0.47
SMC4-201ENST00000344722 UROSP10746 265 aa17.99■□□□□ 0.47
SMC4-201ENST00000344722 PRG2P13727 222 aa17.99■□□□□ 0.47
SMC4-201ENST00000344722 CD36P16671 472 aa17.99■□□□□ 0.47
SMC4-201ENST00000344722 ITGB5P18084 799 aa17.99■□□□□ 0.47
SMC4-201ENST00000344722 RFX3P48380 749 aa17.99■□□□□ 0.47
SMC4-201ENST00000344722 GALNT3Q14435 633 aa17.99■□□□□ 0.47
SMC4-201ENST00000344722 ARMC12Q5T9G4 340 aa17.99■□□□□ 0.47
SMC4-201ENST00000344722 EPGNQ6UW88 154 aa17.99■□□□□ 0.47
SMC4-201ENST00000344722 TRAPPC12Q8WVT3 735 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms