RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 LYPLAL1Q5VWZ2 237 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 COLGALT2Q8IYK4 626 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 UTP4Q969X6 686 aaKnown RBP4.77□□□□□ -1.65
CSMD3-203ENST00000343508 CELF6Q96J87 481 aaKnown RBP4.77□□□□□ -1.65
CSMD3-203ENST00000343508 HACL1Q9UJ83 578 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 VPS28Q9UK41 221 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 COL1A1P02452 1464 aaPredicted RBP4.77□□□□□ -1.65
CSMD3-203ENST00000343508 IRGMA1A4Y4 181 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 STX11O75558 287 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 FABP3P05413 133 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 ENO2P09104 434 aaPredicted RBP4.77□□□□□ -1.65
CSMD3-203ENST00000343508 SULT2A1Q06520 285 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 PHKG1Q16816 387 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 INTS6LQ5JSJ4 861 aaKnown RBP4.77□□□□□ -1.65
CSMD3-203ENST00000343508 TFAP2DQ7Z6R9 452 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 SELENOMQ8WWX9 145 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 NELL1Q92832 810 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 MFSD3Q96ES6 412 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 AASDHPPTQ9NRN7 309 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 CFL2Q9Y281 166 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 BTRCQ9Y297 605 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 OR56A5P0C7T3 313 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 XRCC1P18887 633 aaPredicted RBP4.77□□□□□ -1.65
CSMD3-203ENST00000343508 GLDCP23378 1020 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 IRF9Q00978 393 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 IKBKEQ14164 716 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 GRM2Q14416 872 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 BRMS1LQ5PSV4 323 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 MFSD4BQ5TF39 518 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 ERICH5Q6P6B1 374 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 SPATA6LQ8N4H0 392 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 CDYL2Q8N8U2 506 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 STYXQ8WUJ0 223 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 NIFKQ9BYG3 293 aaKnown RBP4.77□□□□□ -1.65
CSMD3-203ENST00000343508 TBX1O43435 398 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 PIGRP01833 764 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 CES1P23141 567 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 HALP42357 657 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 GPR15P49685 360 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 BCAP31P51572 246 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 VEPH1Q14D04 833 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 PIGGQ5H8A4 983 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 CELF3Q5SZQ8 465 aaKnown RBP4.77□□□□□ -1.65
CSMD3-203ENST00000343508 AFTPHQ6ULP2 937 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 NECAB2Q7Z6G3 386 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 FAR1Q8WVX9 515 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 OR2B2Q9GZK3 357 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 ATXN3LQ9H3M9 355 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 ADAMTS7Q9UKP4 1686 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 TOGARAM1Q9Y4F4 1720 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 H0YAE9 185 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 SNAPC5O75971 98 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 SERPINA1P01009 418 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 DHRS4L1P0CG22 281 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 HNF4AP41235 474 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 ALDH3A2P51648 485 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 MSS51Q4VC12 460 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 ZBTB46Q86UZ6 589 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 CAMKK1Q8N5S9 505 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 RTL3Q8N8U3 475 aaKnown RBP4.77□□□□□ -1.65
CSMD3-203ENST00000343508 IRGQQ8WZA9 623 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 PTPRHQ9HD43 1115 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 MKLN1Q9UL63 735 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 COL1A2P08123 1366 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 WNT10BO00744 389 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 TFECO14948 347 aaPredicted RBP4.77□□□□□ -1.65
CSMD3-203ENST00000343508 ALDH1A1P00352 501 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 PPIBP23284 216 aaKnown RBP4.77□□□□□ -1.65
CSMD3-203ENST00000343508 L1CAMP32004 1257 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 ATP4BP51164 291 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 MVKQ03426 396 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 OGFOD2Q6N063 350 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 ERMP1Q7Z2K6 904 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 CYP2U1Q7Z449 544 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 HAPLN3Q96S86 360 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 SLC9A7Q96T83 725 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 TRIM8Q9BZR9 551 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 SPATC1LQ9H0A9 340 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 ZFP14Q9HCL3 533 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 SH3BP4Q9P0V3 963 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 PNMA8BQ9ULN7 279 aaPredicted RBP4.77□□□□□ -1.65
CSMD3-203ENST00000343508 CDH13P55290 713 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 DNAJB13P59910 316 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 CLCQ05315 142 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 C9orf57Q5W0N0 161 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 SH3BP5LQ7L8J4 393 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 WDR36Q8NI36 951 aaKnown RBP4.77□□□□□ -1.65
CSMD3-203ENST00000343508 ZNF516Q92618 1163 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 PCDHGA10Q9Y5H3 936 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 ADAMDEC1O15204 470 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 TNFRSF21O75509 655 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 ITGALP20701 1170 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 NMBRP28336 390 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 RPL38P63173 70 aaKnown RBP4.77□□□□□ -1.65
CSMD3-203ENST00000343508 ZNF33AQ06730 810 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 HECTD2Q5U5R9 776 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 UGT2A3Q6UWM9 527 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 CACTIN-AS1Q8N1I8 211 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 PARP8Q8N3A8 854 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 PDP1Q9P0J1 537 aaPredicted RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms