RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 TMEM168Q9H0V1 697 aa13.27□□□□□ -0.29
SIRPB3P-201ENST00000340424 FAM83DQ9H4H8 585 aa13.27□□□□□ -0.29
SIRPB3P-201ENST00000340424 RMI1Q9H9A7 625 aa13.27□□□□□ -0.29
SIRPB3P-201ENST00000340424 ZFYVE1Q9HBF4 777 aa13.27□□□□□ -0.29
SIRPB3P-201ENST00000340424 VPS18Q9P253 973 aa13.27□□□□□ -0.29
SIRPB3P-201ENST00000340424 NFKBIL1Q9UBC1 381 aaPredicted RBP13.27□□□□□ -0.29
SIRPB3P-201ENST00000340424 SAE1Q9UBE0 346 aaPredicted RBP13.27□□□□□ -0.29
SIRPB3P-201ENST00000340424 GULP1Q9UBP9 304 aa13.27□□□□□ -0.29
SIRPB3P-201ENST00000340424 FAM153AQ9UHL3 310 aa13.27□□□□□ -0.29
SIRPB3P-201ENST00000340424 CD84Q9UIB8 345 aa13.27□□□□□ -0.29
SIRPB3P-201ENST00000340424 APPL1Q9UKG1 709 aa13.27□□□□□ -0.29
SIRPB3P-201ENST00000340424 SUFUQ9UMX1 484 aa13.27□□□□□ -0.29
SIRPB3P-201ENST00000340424 CELSR3Q9NYQ7 3312 aa13.27□□□□□ -0.29
SIRPB3P-201ENST00000340424 MYLKQ15746 1914 aa13.27□□□□□ -0.29
SIRPB3P-201ENST00000340424 MIF4GDA9UHW6 222 aaKnown RBP13.26□□□□□ -0.29
SIRPB3P-201ENST00000340424 GPR89AB7ZAQ6 455 aa13.26□□□□□ -0.29
SIRPB3P-201ENST00000340424 TMX2-CTNND1H3BSU7 103 aa13.26□□□□□ -0.29
SIRPB3P-201ENST00000340424 MAP3K7O43318 606 aa13.26□□□□□ -0.29
SIRPB3P-201ENST00000340424 NUDT21O43809 227 aaKnown RBP13.26□□□□□ -0.29
SIRPB3P-201ENST00000340424 KRT37O76014 449 aa13.26□□□□□ -0.29
SIRPB3P-201ENST00000340424 NDST3O95803 873 aa13.26□□□□□ -0.29
SIRPB3P-201ENST00000340424 GPR89BP0CG08 455 aa13.26□□□□□ -0.29
SIRPB3P-201ENST00000340424 GNPDA1P46926 289 aa13.26□□□□□ -0.29
SIRPB3P-201ENST00000340424 GSDMDP57764 484 aa13.26□□□□□ -0.29
SIRPB3P-201ENST00000340424 WASHC5Q12768 1159 aa13.26□□□□□ -0.29
SIRPB3P-201ENST00000340424 SPIDRQ14159 915 aa13.26□□□□□ -0.29
SIRPB3P-201ENST00000340424 GALNT3Q14435 633 aa13.26□□□□□ -0.29
SIRPB3P-201ENST00000340424 PTPRRQ15256 657 aa13.26□□□□□ -0.29
SIRPB3P-201ENST00000340424 ISXQ2M1V0 245 aa13.26□□□□□ -0.29
SIRPB3P-201ENST00000340424 C14orf28Q4W4Y0 310 aa13.26□□□□□ -0.29
SIRPB3P-201ENST00000340424 PERM1Q5SV97 790 aa13.26□□□□□ -0.29
SIRPB3P-201ENST00000340424 CERCAMQ5T4B2 595 aa13.26□□□□□ -0.29
SIRPB3P-201ENST00000340424 HENMT1Q5T8I9 393 aaKnown RBP13.26□□□□□ -0.29
SIRPB3P-201ENST00000340424 KCTD16Q68DU8 428 aa13.26□□□□□ -0.29
SIRPB3P-201ENST00000340424 ZC3H18Q86VM9 953 aaKnown RBP13.26□□□□□ -0.29
SIRPB3P-201ENST00000340424 TMEM139Q8IV31 216 aa13.26□□□□□ -0.29
SIRPB3P-201ENST00000340424 LRRC57Q8N9N7 239 aa13.26□□□□□ -0.29
SIRPB3P-201ENST00000340424 ACRBPQ8NEB7 543 aa13.26□□□□□ -0.29
SIRPB3P-201ENST00000340424 SCAMP4Q969E2 229 aa13.26□□□□□ -0.29
SIRPB3P-201ENST00000340424 HAUS1Q96CS2 278 aa13.26□□□□□ -0.29
SIRPB3P-201ENST00000340424 PPP1R2P1Q96PQ5 205 aa13.26□□□□□ -0.29
SIRPB3P-201ENST00000340424 FCRL5Q96RD9 977 aa13.26□□□□□ -0.29
SIRPB3P-201ENST00000340424 ZSCAN5AQ9BUG6 496 aa13.26□□□□□ -0.29
SIRPB3P-201ENST00000340424 RIOK2Q9BVS4 552 aaKnown RBP13.26□□□□□ -0.29
SIRPB3P-201ENST00000340424 CEP41Q9BYV8 373 aa13.26□□□□□ -0.29
SIRPB3P-201ENST00000340424 LACRTQ9GZZ8 138 aa13.26□□□□□ -0.29
SIRPB3P-201ENST00000340424 DPEP2Q9H4A9 486 aa13.26□□□□□ -0.29
SIRPB3P-201ENST00000340424 TRABDQ9H4I3 376 aa13.26□□□□□ -0.29
SIRPB3P-201ENST00000340424 SIRPGQ9P1W8 387 aa13.26□□□□□ -0.29
SIRPB3P-201ENST00000340424 KLHL8Q9P2G9 620 aaPredicted RBP13.26□□□□□ -0.29
SIRPB3P-201ENST00000340424 DUSP10Q9Y6W6 482 aa13.26□□□□□ -0.29
SIRPB3P-201ENST00000340424 DSPP15924 2871 aaKnown RBP13.26□□□□□ -0.29
SIRPB3P-201ENST00000340424 PKD1L2Q7Z442 2459 aa13.25□□□□□ -0.29
SIRPB3P-201ENST00000340424 ACACAQ13085 2346 aa13.25□□□□□ -0.29
SIRPB3P-201ENST00000340424 NTN3O00634 580 aaPredicted RBP13.25□□□□□ -0.29
SIRPB3P-201ENST00000340424 DXOO77932 396 aaKnown RBP13.25□□□□□ -0.29
SIRPB3P-201ENST00000340424 TJP3O95049 919 aa13.25□□□□□ -0.29
SIRPB3P-201ENST00000340424 MT-CYBP00156 380 aaPredicted RBP13.25□□□□□ -0.29
SIRPB3P-201ENST00000340424 ACTN2P35609 894 aa13.25□□□□□ -0.29
SIRPB3P-201ENST00000340424 LSSP48449 732 aa13.25□□□□□ -0.29
SIRPB3P-201ENST00000340424 ADCY2Q08462 1091 aa13.25□□□□□ -0.29
SIRPB3P-201ENST00000340424 MPP3Q13368 585 aa13.25□□□□□ -0.29
SIRPB3P-201ENST00000340424 HLTFQ14527 1009 aaKnown RBP eCLIP13.25□□□□□ -0.29
SIRPB3P-201ENST00000340424 NOMO1Q15155 1222 aa13.25□□□□□ -0.29
SIRPB3P-201ENST00000340424 PCSK7Q16549 785 aa13.25□□□□□ -0.29
SIRPB3P-201ENST00000340424 ZDHHC20Q5W0Z9 365 aa13.25□□□□□ -0.29
SIRPB3P-201ENST00000340424 IGF2-ASQ6U949 168 aa13.25□□□□□ -0.29
SIRPB3P-201ENST00000340424 NYAP1Q6ZVC0 841 aa13.25□□□□□ -0.29
SIRPB3P-201ENST00000340424 LYSMD3Q7Z3D4 306 aa13.25□□□□□ -0.29
SIRPB3P-201ENST00000340424 GALNT13Q8IUC8 556 aa13.25□□□□□ -0.29
SIRPB3P-201ENST00000340424 CDKL3Q8IVW4 592 aaPredicted RBP13.25□□□□□ -0.29
SIRPB3P-201ENST00000340424 UBL4BQ8N7F7 174 aa13.25□□□□□ -0.29
SIRPB3P-201ENST00000340424 SPATA22Q8NHS9 363 aa13.25□□□□□ -0.29
SIRPB3P-201ENST00000340424 CCDC74AQ96AQ1 378 aa13.25□□□□□ -0.29
SIRPB3P-201ENST00000340424 SMIM14Q96QK8 99 aa13.25□□□□□ -0.29
SIRPB3P-201ENST00000340424 OR2M4Q96R27 311 aa13.25□□□□□ -0.29
SIRPB3P-201ENST00000340424 OSBPL8Q9BZF1 889 aa13.25□□□□□ -0.29
SIRPB3P-201ENST00000340424 POLR1BQ9H9Y6 1135 aa13.25□□□□□ -0.29
SIRPB3P-201ENST00000340424 AMFRQ9UKV5 643 aa13.25□□□□□ -0.29
SIRPB3P-201ENST00000340424 ZKSCAN5Q9Y2L8 839 aa13.25□□□□□ -0.29
SIRPB3P-201ENST00000340424 ZNF711Q9Y462 761 aa13.25□□□□□ -0.29
SIRPB3P-201ENST00000340424 APC2O95996 2303 aa13.24□□□□□ -0.29
SIRPB3P-201ENST00000340424 A0A087WV48 116 aa13.24□□□□□ -0.29
SIRPB3P-201ENST00000340424 LOC285095A0A1B0GVY8 99 aa13.24□□□□□ -0.29
SIRPB3P-201ENST00000340424 GRID2IPA4D2P6 1211 aa13.24□□□□□ -0.29
SIRPB3P-201ENST00000340424 B4DGG1 531 aa13.24□□□□□ -0.29
SIRPB3P-201ENST00000340424 NOBOXO60393 691 aa13.24□□□□□ -0.29
SIRPB3P-201ENST00000340424 BRINP1O60477 761 aa13.24□□□□□ -0.29
SIRPB3P-201ENST00000340424 USP12O75317 370 aa13.24□□□□□ -0.29
SIRPB3P-201ENST00000340424 PMPCBO75439 489 aa13.24□□□□□ -0.29
SIRPB3P-201ENST00000340424 STK10O94804 968 aaKnown RBP13.24□□□□□ -0.29
SIRPB3P-201ENST00000340424 NFKB1P19838 968 aa13.24□□□□□ -0.29
SIRPB3P-201ENST00000340424 HLA-DPA1P20036 260 aa13.24□□□□□ -0.29
SIRPB3P-201ENST00000340424 MSNP26038 577 aaKnown RBP13.24□□□□□ -0.29
SIRPB3P-201ENST00000340424 CD68P34810 354 aaPredicted RBP13.24□□□□□ -0.29
SIRPB3P-201ENST00000340424 ADCY8P40145 1251 aa13.24□□□□□ -0.29
SIRPB3P-201ENST00000340424 EIF3IQ13347 325 aaKnown RBP13.24□□□□□ -0.29
SIRPB3P-201ENST00000340424 TCEA2Q15560 299 aa13.24□□□□□ -0.29
SIRPB3P-201ENST00000340424 CLPPQ16740 277 aaPredicted RBP13.24□□□□□ -0.29
SIRPB3P-201ENST00000340424 ZNF569Q5MCW4 686 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms