RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 DMTF1Q9Y222 760 aa17.42■□□□□ 0.38
CHGA-202ENST00000334654 CA5BQ9Y2D0 317 aa17.42■□□□□ 0.38
CHGA-202ENST00000334654 R4GN57 208 aa17.42■□□□□ 0.38
CHGA-202ENST00000334654 CCDC162PA2VCL2 907 aa17.41■□□□□ 0.38
CHGA-202ENST00000334654 POM121BA6NF01 834 aa17.41■□□□□ 0.38
CHGA-202ENST00000334654 OR51F1A6NGY5 319 aa17.41■□□□□ 0.38
CHGA-202ENST00000334654 AGAP14A8MT82 685 aa17.41■□□□□ 0.38
CHGA-202ENST00000334654 FADS2P1A8MWK0 482 aa17.41■□□□□ 0.38
CHGA-202ENST00000334654 GPR39O43194 453 aa17.41■□□□□ 0.38
CHGA-202ENST00000334654 POLBP06746 335 aa17.41■□□□□ 0.38
CHGA-202ENST00000334654 TRIM23P36406 574 aa17.41■□□□□ 0.38
CHGA-202ENST00000334654 NUDT1P36639 197 aa17.41■□□□□ 0.38
CHGA-202ENST00000334654 CRYMQ14894 314 aa17.41■□□□□ 0.38
CHGA-202ENST00000334654 CHRNA6Q15825 494 aa17.41■□□□□ 0.38
CHGA-202ENST00000334654 ZDHHC20Q5W0Z9 365 aa17.41■□□□□ 0.38
CHGA-202ENST00000334654 KIAA0930Q6ICG6 404 aaPredicted RBP17.41■□□□□ 0.38
CHGA-202ENST00000334654 PNCKQ6P2M8 343 aa17.41■□□□□ 0.38
CHGA-202ENST00000334654 FAM151BQ6UXP7 276 aa17.41■□□□□ 0.38
CHGA-202ENST00000334654 UNC5BQ8IZJ1 945 aa17.41■□□□□ 0.38
CHGA-202ENST00000334654 PYROXD1Q8WU10 500 aa17.41■□□□□ 0.38
CHGA-202ENST00000334654 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.41■□□□□ 0.38
CHGA-202ENST00000334654 FUBP1Q96AE4 644 aaKnown RBP17.41■□□□□ 0.38
CHGA-202ENST00000334654 SGSM3Q96HU1 749 aa17.41■□□□□ 0.38
CHGA-202ENST00000334654 MYOCQ99972 504 aa17.41■□□□□ 0.38
CHGA-202ENST00000334654 TSPYL1Q9H0U9 437 aa17.41■□□□□ 0.38
CHGA-202ENST00000334654 CNOT6Q9ULM6 557 aaKnown RBP17.41■□□□□ 0.38
CHGA-202ENST00000334654 PI4KAP42356 2102 aa17.41■□□□□ 0.38
CHGA-202ENST00000334654 USP34Q70CQ2 3546 aa17.41■□□□□ 0.38
CHGA-202ENST00000334654 GLYATL1P3A0A0U1RQE8 302 aa17.4■□□□□ 0.38
CHGA-202ENST00000334654 PRAMEF26H0Y7S4 382 aa17.4■□□□□ 0.38
CHGA-202ENST00000334654 H0Y8X5 98 aa17.4■□□□□ 0.38
CHGA-202ENST00000334654 UGT1A9O60656 530 aa17.4■□□□□ 0.38
CHGA-202ENST00000334654 SRP72O76094 671 aaKnown RBP17.4■□□□□ 0.38
CHGA-202ENST00000334654 VAPBO95292 243 aa17.4■□□□□ 0.38
CHGA-202ENST00000334654 TTC4O95801 387 aa17.4■□□□□ 0.38
CHGA-202ENST00000334654 GOT2P00505 430 aaKnown RBP17.4■□□□□ 0.38
CHGA-202ENST00000334654 PRSS56P0CW18 603 aa17.4■□□□□ 0.38
CHGA-202ENST00000334654 UGT1A6P19224 532 aa17.4■□□□□ 0.38
CHGA-202ENST00000334654 UGT1A1P22309 533 aa17.4■□□□□ 0.38
CHGA-202ENST00000334654 UGT1A4P22310 534 aa17.4■□□□□ 0.38
CHGA-202ENST00000334654 FOXN2P32314 431 aa17.4■□□□□ 0.38
CHGA-202ENST00000334654 UGT1A3P35503 534 aa17.4■□□□□ 0.38
CHGA-202ENST00000334654 UGT1A5P35504 534 aa17.4■□□□□ 0.38
CHGA-202ENST00000334654 CDKN1CP49918 316 aaPredicted RBP17.4■□□□□ 0.38
CHGA-202ENST00000334654 CLDN2P57739 230 aa17.4■□□□□ 0.38
CHGA-202ENST00000334654 SIM2Q14190 667 aaPredicted RBP17.4■□□□□ 0.38
CHGA-202ENST00000334654 ATP13A5Q4VNC0 1218 aa17.4■□□□□ 0.38
CHGA-202ENST00000334654 GCNT7Q6ZNI0 430 aa17.4■□□□□ 0.38
CHGA-202ENST00000334654 CEP68Q76N32 757 aa17.4■□□□□ 0.38
CHGA-202ENST00000334654 ARMCX6Q7L4S7 300 aa17.4■□□□□ 0.38
CHGA-202ENST00000334654 TRAM1L1Q8N609 369 aa17.4■□□□□ 0.38
CHGA-202ENST00000334654 PRRX2Q99811 253 aa17.4■□□□□ 0.38
CHGA-202ENST00000334654 UGT1A7Q9HAW7 530 aa17.4■□□□□ 0.38
CHGA-202ENST00000334654 UGT1A10Q9HAW8 530 aa17.4■□□□□ 0.38
CHGA-202ENST00000334654 UGT1A8Q9HAW9 530 aa17.4■□□□□ 0.38
CHGA-202ENST00000334654 LRRC4CQ9HCJ2 640 aa17.4■□□□□ 0.38
CHGA-202ENST00000334654 IL1RAPL1Q9NZN1 696 aa17.4■□□□□ 0.38
CHGA-202ENST00000334654 APPL1Q9UKG1 709 aa17.4■□□□□ 0.38
CHGA-202ENST00000334654 FNDC3AQ9Y2H6 1198 aaKnown RBP17.4■□□□□ 0.38
CHGA-202ENST00000334654 HS3ST3A1Q9Y663 406 aa17.4■□□□□ 0.38
CHGA-202ENST00000334654 GPR179Q6PRD1 2367 aa17.4■□□□□ 0.38
CHGA-202ENST00000334654 TRBV5-4A0A0C4DH59 114 aa17.39■□□□□ 0.37
CHGA-202ENST00000334654 MEI4A8MW99 385 aa17.39■□□□□ 0.37
CHGA-202ENST00000334654 PCCBP05166 539 aa17.39■□□□□ 0.37
CHGA-202ENST00000334654 ITPKAP23677 461 aa17.39■□□□□ 0.37
CHGA-202ENST00000334654 TEAD1P28347 426 aa17.39■□□□□ 0.37
CHGA-202ENST00000334654 SSTR1P30872 391 aa17.39■□□□□ 0.37
CHGA-202ENST00000334654 AKT2P31751 481 aa17.39■□□□□ 0.37
CHGA-202ENST00000334654 MC4RP32245 332 aa17.39■□□□□ 0.37
CHGA-202ENST00000334654 INPP5AQ14642 412 aa17.39■□□□□ 0.37
CHGA-202ENST00000334654 KYNUQ16719 465 aa17.39■□□□□ 0.37
CHGA-202ENST00000334654 SPANXN3Q5MJ09 141 aa17.39■□□□□ 0.37
CHGA-202ENST00000334654 TRMT10BQ6PF06 316 aaKnown RBP17.39■□□□□ 0.37
CHGA-202ENST00000334654 ABI3BPQ7Z7G0 1075 aa17.39■□□□□ 0.37
CHGA-202ENST00000334654 PIANPQ8IYJ0 282 aa17.39■□□□□ 0.37
CHGA-202ENST00000334654 PNPLA1Q8N8W4 532 aa17.39■□□□□ 0.37
CHGA-202ENST00000334654 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.39■□□□□ 0.37
CHGA-202ENST00000334654 ZNF398Q8TD17 642 aa17.39■□□□□ 0.37
CHGA-202ENST00000334654 SNX19Q92543 992 aa17.39■□□□□ 0.37
CHGA-202ENST00000334654 CFAP36Q96G28 342 aa17.39■□□□□ 0.37
CHGA-202ENST00000334654 SERAC1Q96JX3 654 aa17.39■□□□□ 0.37
CHGA-202ENST00000334654 ZSCAN5AQ9BUG6 496 aa17.39■□□□□ 0.37
CHGA-202ENST00000334654 SPATA16Q9BXB7 569 aa17.39■□□□□ 0.37
CHGA-202ENST00000334654 C1QTNF7Q9BXJ2 289 aa17.39■□□□□ 0.37
CHGA-202ENST00000334654 CDC42EP4Q9H3Q1 356 aaKnown RBP17.39■□□□□ 0.37
CHGA-202ENST00000334654 SEMA4AQ9H3S1 761 aa17.39■□□□□ 0.37
CHGA-202ENST00000334654 MOCS1Q9NZB8 636 aa17.39■□□□□ 0.37
CHGA-202ENST00000334654 NINJ2Q9NZG7 142 aa17.39■□□□□ 0.37
CHGA-202ENST00000334654 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.39■□□□□ 0.37
CHGA-202ENST00000334654 CACNA1EQ15878 2313 aa17.39■□□□□ 0.37
CHGA-202ENST00000334654 DMDP11532 3685 aa17.39■□□□□ 0.37
CHGA-202ENST00000334654 A0A1W2PR77 199 aa17.38■□□□□ 0.37
CHGA-202ENST00000334654 PRAMEF1O95521 474 aa17.38■□□□□ 0.37
CHGA-202ENST00000334654 C1QAP02745 245 aa17.38■□□□□ 0.37
CHGA-202ENST00000334654 TUBBP07437 444 aa17.38■□□□□ 0.37
CHGA-202ENST00000334654 TSHRP16473 764 aa17.38■□□□□ 0.37
CHGA-202ENST00000334654 DHPSP49366 369 aaPredicted RBP17.38■□□□□ 0.37
CHGA-202ENST00000334654 PFN3P60673 137 aa17.38■□□□□ 0.37
CHGA-202ENST00000334654 NFATC2Q13469 925 aa17.38■□□□□ 0.37
CHGA-202ENST00000334654 FRG1Q14331 258 aaKnown RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms