RNA–Protein interactions for RNA: ENST00000334536.12

SPNS1-203, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 2,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-203ENST00000334536 TMEM30AQ9NV96 361 aa20.59■□□□□ 0.89
SPNS1-203ENST00000334536 PKD2L2Q9NZM6 624 aa20.59■□□□□ 0.89
SPNS1-203ENST00000334536 SNX13Q9Y5W8 968 aa20.59■□□□□ 0.89
SPNS1-203ENST00000334536 ST14Q9Y5Y6 855 aa20.59■□□□□ 0.89
SPNS1-203ENST00000334536 COL4A4P53420 1690 aaPredicted RBP20.58■□□□□ 0.89
SPNS1-203ENST00000334536 ANXA9O76027 345 aa20.58■□□□□ 0.89
SPNS1-203ENST00000334536 NR4A1P22736 598 aa20.58■□□□□ 0.89
SPNS1-203ENST00000334536 GRIK1P39086 918 aa20.58■□□□□ 0.89
SPNS1-203ENST00000334536 RPL14P50914 215 aaKnown RBP20.58■□□□□ 0.89
SPNS1-203ENST00000334536 PRKAA1Q13131 559 aa20.58■□□□□ 0.89
SPNS1-203ENST00000334536 SLC12A1Q13621 1099 aa20.58■□□□□ 0.89
SPNS1-203ENST00000334536 NFE2Q16621 373 aaPredicted RBP20.58■□□□□ 0.89
SPNS1-203ENST00000334536 TAC4Q86UU9 113 aa20.58■□□□□ 0.89
SPNS1-203ENST00000334536 EDEM1Q92611 657 aa20.58■□□□□ 0.89
SPNS1-203ENST00000334536 RCN3Q96D15 328 aa20.58■□□□□ 0.89
SPNS1-203ENST00000334536 BTN2A3PQ96KV6 586 aa20.58■□□□□ 0.89
SPNS1-203ENST00000334536 FCRL5Q96RD9 977 aa20.58■□□□□ 0.89
SPNS1-203ENST00000334536 CLSTN3Q9BQT9 956 aa20.58■□□□□ 0.89
SPNS1-203ENST00000334536 BEGAINQ9BUH8 593 aa20.58■□□□□ 0.89
SPNS1-203ENST00000334536 ZNF385DQ9H6B1 395 aa20.58■□□□□ 0.89
SPNS1-203ENST00000334536 TASP1Q9H6P5 420 aa20.58■□□□□ 0.89
SPNS1-203ENST00000334536 FAM105AQ9NUU6 356 aa20.58■□□□□ 0.89
SPNS1-203ENST00000334536 PACSIN3Q9UKS6 424 aa20.58■□□□□ 0.89
SPNS1-203ENST00000334536 SNX10Q9Y5X0 201 aa20.58■□□□□ 0.89
SPNS1-203ENST00000334536 TANC1Q9C0D5 1861 aa20.58■□□□□ 0.88
SPNS1-203ENST00000334536 M0QZ92 97 aa20.58■□□□□ 0.88
SPNS1-203ENST00000334536 DDHD2O94830 711 aa20.58■□□□□ 0.88
SPNS1-203ENST00000334536 ITIH1P19827 911 aa20.58■□□□□ 0.88
SPNS1-203ENST00000334536 S100A5P33763 92 aa20.58■□□□□ 0.88
SPNS1-203ENST00000334536 FKBP1BP68106 108 aa20.58■□□□□ 0.88
SPNS1-203ENST00000334536 MRPS6P82932 125 aaKnown RBP20.58■□□□□ 0.88
SPNS1-203ENST00000334536 MPP1Q00013 466 aa20.58■□□□□ 0.88
SPNS1-203ENST00000334536 USP10Q14694 798 aaKnown RBP20.58■□□□□ 0.88
SPNS1-203ENST00000334536 CDONQ4KMG0 1287 aa20.58■□□□□ 0.88
SPNS1-203ENST00000334536 ERMP1Q7Z2K6 904 aa20.58■□□□□ 0.88
SPNS1-203ENST00000334536 ZNF598Q86UK7 904 aaKnown RBP20.58■□□□□ 0.88
SPNS1-203ENST00000334536 TMEM151AQ8N4L1 468 aa20.58■□□□□ 0.88
SPNS1-203ENST00000334536 ASCC1Q8N9N2 400 aaKnown RBP20.58■□□□□ 0.88
SPNS1-203ENST00000334536 PIK3C3Q8NEB9 887 aa20.58■□□□□ 0.88
SPNS1-203ENST00000334536 MAPK15Q8TD08 544 aa20.58■□□□□ 0.88
SPNS1-203ENST00000334536 STYXQ8WUJ0 223 aa20.58■□□□□ 0.88
SPNS1-203ENST00000334536 GLT1D1Q96MS3 346 aa20.58■□□□□ 0.88
SPNS1-203ENST00000334536 GAD1Q99259 594 aa20.58■□□□□ 0.88
SPNS1-203ENST00000334536 TBL1YQ9BQ87 522 aa20.58■□□□□ 0.88
SPNS1-203ENST00000334536 ATP13A3Q9H7F0 1226 aa20.58■□□□□ 0.88
SPNS1-203ENST00000334536 ZNF408Q9H9D4 720 aa20.58■□□□□ 0.88
SPNS1-203ENST00000334536 MRM3Q9HC36 420 aaKnown RBP20.58■□□□□ 0.88
SPNS1-203ENST00000334536 CNOT6Q9ULM6 557 aaKnown RBP20.58■□□□□ 0.88
SPNS1-203ENST00000334536 FADS2P1A8MWK0 482 aa20.57■□□□□ 0.88
SPNS1-203ENST00000334536 MATN1P21941 496 aa20.57■□□□□ 0.88
SPNS1-203ENST00000334536 CLCNKBP51801 687 aa20.57■□□□□ 0.88
SPNS1-203ENST00000334536 ECT2LQ008S8 904 aa20.57■□□□□ 0.88
SPNS1-203ENST00000334536 PGS1Q32NB8 556 aa20.57■□□□□ 0.88
SPNS1-203ENST00000334536 CCNYL2Q5T2Q4 361 aa20.57■□□□□ 0.88
SPNS1-203ENST00000334536 SEL1L3Q68CR1 1132 aa20.57■□□□□ 0.88
SPNS1-203ENST00000334536 HMBOX1Q6NT76 420 aa20.57■□□□□ 0.88
SPNS1-203ENST00000334536 RNF34Q969K3 372 aa20.57■□□□□ 0.88
SPNS1-203ENST00000334536 CEP295NLQ96MC4 621 aa20.57■□□□□ 0.88
SPNS1-203ENST00000334536 APBA2Q99767 749 aa20.57■□□□□ 0.88
SPNS1-203ENST00000334536 MTG1Q9BT17 334 aaPredicted RBP20.57■□□□□ 0.88
SPNS1-203ENST00000334536 CLPBQ9H078 707 aa20.57■□□□□ 0.88
SPNS1-203ENST00000334536 TRIT1Q9H3H1 467 aaKnown RBP20.57■□□□□ 0.88
SPNS1-203ENST00000334536 TIMM13Q9Y5L4 95 aaPredicted RBP20.57■□□□□ 0.88
SPNS1-203ENST00000334536 TRPV2Q9Y5S1 764 aa20.57■□□□□ 0.88
SPNS1-203ENST00000334536 ENO3P13929 434 aaPredicted RBP20.56■□□□□ 0.88
SPNS1-203ENST00000334536 ABCG1P45844 678 aa20.56■□□□□ 0.88
SPNS1-203ENST00000334536 GTF2IRD2BQ6EKJ0 949 aa20.56■□□□□ 0.88
SPNS1-203ENST00000334536 FAM171BQ6P995 826 aa20.56■□□□□ 0.88
SPNS1-203ENST00000334536 GTF2IRD2Q86UP8 949 aa20.56■□□□□ 0.88
SPNS1-203ENST00000334536 ACVR1CQ8NER5 493 aa20.56■□□□□ 0.88
SPNS1-203ENST00000334536 MYLPFQ96A32 169 aa20.56■□□□□ 0.88
SPNS1-203ENST00000334536 OR52B2Q96RD2 323 aa20.56■□□□□ 0.88
SPNS1-203ENST00000334536 C9orf16Q9BUW7 83 aa20.56■□□□□ 0.88
SPNS1-203ENST00000334536 PCDH12Q9NPG4 1184 aa20.56■□□□□ 0.88
SPNS1-203ENST00000334536 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.56■□□□□ 0.88
SPNS1-203ENST00000334536 NPAP1Q9NZP6 1156 aa20.56■□□□□ 0.88
SPNS1-203ENST00000334536 MN1Q10571 1320 aaPredicted RBP20.56■□□□□ 0.88
SPNS1-203ENST00000334536 TRIP12Q14669 1992 aaPredicted RBP20.56■□□□□ 0.88
SPNS1-203ENST00000334536 B8ZZF3 427 aa20.56■□□□□ 0.88
SPNS1-203ENST00000334536 IGLV3-25P01717 112 aa20.56■□□□□ 0.88
SPNS1-203ENST00000334536 ODC1P11926 461 aa20.56■□□□□ 0.88
SPNS1-203ENST00000334536 SERPINB5P36952 375 aa20.56■□□□□ 0.88
SPNS1-203ENST00000334536 DPP6P42658 865 aa20.56■□□□□ 0.88
SPNS1-203ENST00000334536 GRIA4P48058 902 aa20.56■□□□□ 0.88
SPNS1-203ENST00000334536 TUFMP49411 452 aaKnown RBP20.56■□□□□ 0.88
SPNS1-203ENST00000334536 GEMP55040 296 aa20.56■□□□□ 0.88
SPNS1-203ENST00000334536 ILF2Q12905 390 aaKnown RBP20.56■□□□□ 0.88
SPNS1-203ENST00000334536 BRMS1LQ5PSV4 323 aa20.56■□□□□ 0.88
SPNS1-203ENST00000334536 OTOP3Q7RTS5 596 aa20.56■□□□□ 0.88
SPNS1-203ENST00000334536 METTL23Q86XA0 190 aa20.56■□□□□ 0.88
SPNS1-203ENST00000334536 GRPEL2Q8TAA5 225 aa20.56■□□□□ 0.88
SPNS1-203ENST00000334536 SLCO4A1Q96BD0 722 aa20.56■□□□□ 0.88
SPNS1-203ENST00000334536 CELF6Q96J87 481 aaKnown RBP20.56■□□□□ 0.88
SPNS1-203ENST00000334536 IL12RB2Q99665 862 aa20.56■□□□□ 0.88
SPNS1-203ENST00000334536 ACBD6Q9BR61 282 aa20.56■□□□□ 0.88
SPNS1-203ENST00000334536 GLOD4Q9HC38 313 aa20.56■□□□□ 0.88
SPNS1-203ENST00000334536 UBP1Q9NZI7 540 aa20.56■□□□□ 0.88
SPNS1-203ENST00000334536 FLRT1Q9NZU1 646 aa20.56■□□□□ 0.88
SPNS1-203ENST00000334536 RUVBL2Q9Y230 463 aaKnown RBP20.56■□□□□ 0.88
SPNS1-203ENST00000334536 TARM1B6A8C7 271 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms