RNA–Protein interactions for RNA: ENST00000334352.8

USP16-201, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP16, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-201ENST00000334352 SPTBN4Q9H254 2564 aa6.34□□□□□ -1.39
USP16-201ENST00000334352 ANKRD66B4E2M5 251 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 PPP1R12AO14974 1030 aaPredicted RBP6.33□□□□□ -1.4
USP16-201ENST00000334352 KMOO15229 486 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 FFAR2O15552 330 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 SDC3O75056 442 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 JCHAINP01591 159 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 FUCA1P04066 466 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 AMPD1P23109 780 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 ITPKBP27987 946 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 PDE1BQ01064 536 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 MPP3Q13368 585 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 ARHGEF7Q14155 803 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 TFDP2Q14188 446 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 C2CD6Q53TS8 623 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 KDELC1Q6UW63 502 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 KDM7AQ6ZMT4 941 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 ARHGAP36Q6ZRI8 547 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 VSTM4Q8IW00 320 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 APLFQ8IW19 511 aaPredicted RBP6.33□□□□□ -1.4
USP16-201ENST00000334352 DDHD1Q8NEL9 900 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 KLK6Q92876 244 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 PDXPQ96GD0 296 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 LGMNQ99538 433 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.33□□□□□ -1.4
USP16-201ENST00000334352 SPATS2LQ9NUQ6 558 aaKnown RBP6.33□□□□□ -1.4
USP16-201ENST00000334352 C17orf113A0A1B0GUU1 675 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 STMND1H3BQB6 276 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 H7C0S8 307 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 MATN2O00339 956 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 DUX1O43812 170 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 NDST3O95803 873 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 PCCBP05166 539 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 CD63P08962 238 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 HOXB3P14651 431 aaPredicted RBP6.33□□□□□ -1.4
USP16-201ENST00000334352 CD151P48509 253 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 CSRP3P50461 194 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 DNA2P51530 1060 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 NIPAL4Q0D2K0 466 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 ACOX1Q15067 660 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 TBR1Q16650 682 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 LDLRAP1Q5SW96 308 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 CCDC81Q6ZN84 652 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 PIM3Q86V86 326 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 HEATR4Q86WZ0 1026 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 HID1Q8IV36 788 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 TTC30BQ8N4P2 665 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 PLD5Q8N7P1 536 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 UBXN4Q92575 508 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 PCMTD1Q96MG8 357 aaPredicted RBP6.33□□□□□ -1.4
USP16-201ENST00000334352 WRAP53Q9BUR4 548 aaKnown RBP6.33□□□□□ -1.4
USP16-201ENST00000334352 THAP2Q9H0W7 228 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 STN1Q9H668 368 aaKnown RBP6.33□□□□□ -1.4
USP16-201ENST00000334352 ETNK2Q9NVF9 386 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 DTLQ9NZJ0 730 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 KLK4Q9Y5K2 254 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 IGLV3-16A0A075B6K0 115 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 A0A087X0T9 212 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 GOLGA8CPA6NN73 597 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 C21orf140B9A014 251 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 J3QKU1 62 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 PJA2O43164 708 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 PSMD3O43242 534 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 MFSD11O43934 449 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 FAM228BP0C875 321 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 F3P13726 295 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 HLA-DPA1P20036 260 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 CTBSQ01459 385 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 IHHQ14623 411 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 ZNF569Q5MCW4 686 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 TMEM164Q5U3C3 297 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 ZNF517Q6ZMY9 492 aaPredicted RBP6.33□□□□□ -1.4
USP16-201ENST00000334352 TAF8Q7Z7C8 310 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 RCOR2Q8IZ40 523 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 OR10G6Q8NH81 332 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 PEX13Q92968 403 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 NKD1Q969G9 470 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 TSACCQ96A04 125 aaPredicted RBP6.33□□□□□ -1.4
USP16-201ENST00000334352 ULK4Q96C45 1275 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 TEKT5Q96M29 485 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 QKIQ96PU8 341 aaKnown RBP eCLIP6.33□□□□□ -1.43e-8■■■□□ 15.2
USP16-201ENST00000334352 CCM2Q9BSQ5 444 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 ANP32EQ9BTT0 268 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 LGR4Q9BXB1 951 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 TMEM168Q9H0V1 697 aa6.33□□□□□ -1.4
USP16-201ENST00000334352 WDR87Q6ZQQ6 2873 aa6.32□□□□□ -1.4
USP16-201ENST00000334352 DFFAO00273 331 aa6.32□□□□□ -1.4
USP16-201ENST00000334352 SUV39H1O43463 412 aa6.32□□□□□ -1.4
USP16-201ENST00000334352 CEACAM4O75871 244 aa6.32□□□□□ -1.4
USP16-201ENST00000334352 HLA-DQB2P05538 268 aa6.32□□□□□ -1.4
USP16-201ENST00000334352 CELA2BP08218 269 aaPredicted RBP6.32□□□□□ -1.4
USP16-201ENST00000334352 HMGCLP35914 325 aa6.32□□□□□ -1.4
USP16-201ENST00000334352 UBASH3AP57075 661 aa6.32□□□□□ -1.4
USP16-201ENST00000334352 MSLNQ13421 630 aaPredicted RBP6.32□□□□□ -1.4
USP16-201ENST00000334352 KRT81Q14533 505 aa6.32□□□□□ -1.4
USP16-201ENST00000334352 LRRC66Q68CR7 880 aa6.32□□□□□ -1.4
USP16-201ENST00000334352 ZNF662Q6ZS27 426 aa6.32□□□□□ -1.4
USP16-201ENST00000334352 GALNT13Q8IUC8 556 aa6.32□□□□□ -1.4
USP16-201ENST00000334352 RHOT1Q8IXI2 618 aa6.32□□□□□ -1.4
USP16-201ENST00000334352 CCHCR1Q8TD31 782 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms