RNA–Protein interactions for RNA: ENST00000327628.9

TRAK1-201, Transcript of trafficking kinesin protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAK1, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-201ENST00000327628 TRABD2AQ86V40 505 aa13.28□□□□□ -0.28
TRAK1-201ENST00000327628 TDRPQ86YL5 185 aa13.28□□□□□ -0.28
TRAK1-201ENST00000327628 METTL21AQ8WXB1 218 aa13.28□□□□□ -0.28
TRAK1-201ENST00000327628 KCTD13Q8WZ19 329 aa13.28□□□□□ -0.28
TRAK1-201ENST00000327628 FUBP3Q96I24 572 aaKnown RBP eCLIP13.28□□□□□ -0.28
TRAK1-201ENST00000327628 FANCFQ9NPI8 374 aa13.28□□□□□ -0.28
TRAK1-201ENST00000327628 RAB26Q9ULW5 256 aa13.28□□□□□ -0.28
TRAK1-201ENST00000327628 MROH1Q8NDA8 1641 aa13.28□□□□□ -0.28
TRAK1-201ENST00000327628 PRORSD1PA6NEY8 169 aa13.28□□□□□ -0.28
TRAK1-201ENST00000327628 PTGES3LE9PB15 166 aa13.28□□□□□ -0.28
TRAK1-201ENST00000327628 PAGE1O75459 146 aa13.28□□□□□ -0.28
TRAK1-201ENST00000327628 POP4O95707 220 aaKnown RBP13.28□□□□□ -0.28
TRAK1-201ENST00000327628 MT-CO1P00395 513 aa13.28□□□□□ -0.28
TRAK1-201ENST00000327628 FAM153BP0C7A2 387 aa13.28□□□□□ -0.28
TRAK1-201ENST00000327628 FAM153CQ494X1 144 aa13.28□□□□□ -0.28
TRAK1-201ENST00000327628 LDLRAP1Q5SW96 308 aa13.28□□□□□ -0.28
TRAK1-201ENST00000327628 CXCL17Q6UXB2 119 aa13.28□□□□□ -0.28
TRAK1-201ENST00000327628 POU5F2Q8N7G0 328 aa13.28□□□□□ -0.28
TRAK1-201ENST00000327628 OR2T12Q8NG77 320 aa13.28□□□□□ -0.28
TRAK1-201ENST00000327628 SNRNP27Q8WVK2 155 aaKnown RBP13.28□□□□□ -0.28
TRAK1-201ENST00000327628 GAS2L1Q99501 681 aaPredicted RBP13.28□□□□□ -0.28
TRAK1-201ENST00000327628 LRTM1Q9HBL6 345 aa13.28□□□□□ -0.28
TRAK1-201ENST00000327628 ADAMDEC1O15204 470 aa13.28□□□□□ -0.28
TRAK1-201ENST00000327628 TLL1O43897 1013 aa13.28□□□□□ -0.28
TRAK1-201ENST00000327628 EDF1O60869 148 aaKnown RBP13.28□□□□□ -0.28
TRAK1-201ENST00000327628 SNAPC5O75971 98 aa13.28□□□□□ -0.28
TRAK1-201ENST00000327628 MMP8P22894 467 aa13.28□□□□□ -0.28
TRAK1-201ENST00000327628 CBX5P45973 191 aa13.28□□□□□ -0.28
TRAK1-201ENST00000327628 TOMM20Q15388 145 aa13.28□□□□□ -0.28
TRAK1-201ENST00000327628 ESRP1Q6NXG1 681 aaKnown RBP13.28□□□□□ -0.28
TRAK1-201ENST00000327628 CPSF7Q8N684 471 aaKnown RBP13.28□□□□□ -0.28
TRAK1-201ENST00000327628 NR4A3Q92570 626 aa13.28□□□□□ -0.28
TRAK1-201ENST00000327628 MCRS1Q96EZ8 462 aa13.28□□□□□ -0.28
TRAK1-201ENST00000327628 IGFLR1Q9H665 355 aa13.28□□□□□ -0.28
TRAK1-201ENST00000327628 TMPRSS4Q9NRS4 437 aa13.28□□□□□ -0.28
TRAK1-201ENST00000327628 CLIC5Q9NZA1 410 aa13.28□□□□□ -0.28
TRAK1-201ENST00000327628 TEX46H3BTG2 121 aa13.28□□□□□ -0.28
TRAK1-201ENST00000327628 NPHS1O60500 1241 aa13.28□□□□□ -0.28
TRAK1-201ENST00000327628 ENTPD5O75356 428 aa13.28□□□□□ -0.28
TRAK1-201ENST00000327628 AGR2O95994 175 aa13.28□□□□□ -0.28
TRAK1-201ENST00000327628 NR2C1P13056 603 aa13.28□□□□□ -0.28
TRAK1-201ENST00000327628 ALDH4A1P30038 563 aa13.28□□□□□ -0.28
TRAK1-201ENST00000327628 SDC2P34741 201 aa13.28□□□□□ -0.28
TRAK1-201ENST00000327628 MANFP55145 182 aaKnown RBP13.28□□□□□ -0.28
TRAK1-201ENST00000327628 SPESP1Q6UW49 350 aa13.28□□□□□ -0.28
TRAK1-201ENST00000327628 ZYG11AQ6WRX3 759 aa13.28□□□□□ -0.28
TRAK1-201ENST00000327628 HNRNPABQ99729 332 aaKnown RBP13.28□□□□□ -0.28
TRAK1-201ENST00000327628 RHBGQ9H310 441 aa13.28□□□□□ -0.28
TRAK1-201ENST00000327628 PSMD13Q9UNM6 376 aa13.28□□□□□ -0.28
TRAK1-201ENST00000327628 PLIN4Q96Q06 1357 aa13.28□□□□□ -0.28
TRAK1-201ENST00000327628 NRP2O60462 931 aa13.27□□□□□ -0.28
TRAK1-201ENST00000327628 KHDRBS3O75525 346 aaKnown RBP13.27□□□□□ -0.28
TRAK1-201ENST00000327628 CLDN9O95484 217 aa13.27□□□□□ -0.28
TRAK1-201ENST00000327628 AP2A1O95782 977 aa13.27□□□□□ -0.28
TRAK1-201ENST00000327628 KIR3DL1P43629 444 aa13.27□□□□□ -0.28
TRAK1-201ENST00000327628 EIF2B2P49770 351 aaKnown RBP13.27□□□□□ -0.28
TRAK1-201ENST00000327628 BLKP51451 505 aa13.27□□□□□ -0.28
TRAK1-201ENST00000327628 IL10RBQ08334 325 aa13.27□□□□□ -0.28
TRAK1-201ENST00000327628 ZSWIM7Q19AV6 140 aa13.27□□□□□ -0.28
TRAK1-201ENST00000327628 ZCCHC23Q6ZST2 131 aa13.27□□□□□ -0.28
TRAK1-201ENST00000327628 CDYL2Q8N8U2 506 aa13.27□□□□□ -0.28
TRAK1-201ENST00000327628 GPR20Q99678 358 aa13.27□□□□□ -0.28
TRAK1-201ENST00000327628 SGK2Q9HBY8 427 aa13.27□□□□□ -0.28
TRAK1-201ENST00000327628 PCDH12Q9NPG4 1184 aa13.27□□□□□ -0.28
TRAK1-201ENST00000327628 PTPRJQ12913 1337 aa13.27□□□□□ -0.28
TRAK1-201ENST00000327628 TSC22D2O75157 780 aa13.27□□□□□ -0.28
TRAK1-201ENST00000327628 LCA5LO95447 670 aa13.27□□□□□ -0.28
TRAK1-201ENST00000327628 DHFRP00374 187 aa13.27□□□□□ -0.28
TRAK1-201ENST00000327628 TRBC1P01850 177 aa13.27□□□□□ -0.28
TRAK1-201ENST00000327628 SNHG28P0DPA3 235 aa13.27□□□□□ -0.28
TRAK1-201ENST00000327628 UROSP10746 265 aa13.27□□□□□ -0.28
TRAK1-201ENST00000327628 PRKAR2AP13861 404 aaKnown RBP13.27□□□□□ -0.28
TRAK1-201ENST00000327628 ATP5A1P25705 553 aaKnown RBP13.27□□□□□ -0.28
TRAK1-201ENST00000327628 PIK3CBP42338 1070 aa13.27□□□□□ -0.28
TRAK1-201ENST00000327628 MYBPC1Q00872 1141 aa13.27□□□□□ -0.28
TRAK1-201ENST00000327628 GAD2Q05329 585 aa13.27□□□□□ -0.28
TRAK1-201ENST00000327628 RALGDSQ12967 914 aa13.27□□□□□ -0.28
TRAK1-201ENST00000327628 EARS2Q5JPH6 523 aaKnown RBP13.27□□□□□ -0.28
TRAK1-201ENST00000327628 PRR23BQ6ZRT6 265 aa13.27□□□□□ -0.28
TRAK1-201ENST00000327628 RNF44Q7L0R7 432 aa13.27□□□□□ -0.28
TRAK1-201ENST00000327628 ILDR1Q86SU0 546 aaPredicted RBP13.27□□□□□ -0.28
TRAK1-201ENST00000327628 PCDH20Q8N6Y1 951 aaKnown RBP13.27□□□□□ -0.28
TRAK1-201ENST00000327628 UBASH3BQ8TF42 649 aa13.27□□□□□ -0.28
TRAK1-201ENST00000327628 P2RY11Q96G91 374 aa13.27□□□□□ -0.28
TRAK1-201ENST00000327628 ZNF354BQ96LW1 612 aa13.27□□□□□ -0.28
TRAK1-201ENST00000327628 CSPG4P5Q96PW8 444 aa13.27□□□□□ -0.28
TRAK1-201ENST00000327628 USP20Q9Y2K6 914 aa13.27□□□□□ -0.28
TRAK1-201ENST00000327628 XKRYO14609 159 aa13.27□□□□□ -0.29
TRAK1-201ENST00000327628 AHCYL1O43865 530 aa13.27□□□□□ -0.29
TRAK1-201ENST00000327628 CBX6O95503 412 aa13.27□□□□□ -0.29
TRAK1-201ENST00000327628 PDX1P52945 283 aa13.27□□□□□ -0.29
TRAK1-201ENST00000327628 PRKAG1P54619 331 aa13.27□□□□□ -0.29
TRAK1-201ENST00000327628 KLHL26Q53HC5 615 aa13.27□□□□□ -0.29
TRAK1-201ENST00000327628 TNFAIP8L3Q5GJ75 292 aa13.27□□□□□ -0.29
TRAK1-201ENST00000327628 ZNF697Q5TEC3 545 aa13.27□□□□□ -0.29
TRAK1-201ENST00000327628 MED27Q6P2C8 311 aa13.27□□□□□ -0.29
TRAK1-201ENST00000327628 KCNK18Q7Z418 384 aa13.27□□□□□ -0.29
TRAK1-201ENST00000327628 RANBP3LQ86VV4 465 aaPredicted RBP13.27□□□□□ -0.29
TRAK1-201ENST00000327628 ATCAYQ86WG3 371 aa13.27□□□□□ -0.29
TRAK1-201ENST00000327628 MCEMP1Q8IX19 187 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms