RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 PSMG2Q969U7 264 aa14.69□□□□□ -0.06
TCOF1-201ENST00000323668 C6orf62Q9GZU0 229 aaPredicted RBP14.69□□□□□ -0.06
TCOF1-201ENST00000323668 CACNA2D2Q9NY47 1150 aa14.69□□□□□ -0.06
TCOF1-201ENST00000323668 PAPPAQ13219 1627 aa14.69□□□□□ -0.06
TCOF1-201ENST00000323668 CAPN15O75808 1086 aa14.68□□□□□ -0.06
TCOF1-201ENST00000323668 THRBP10828 461 aa14.68□□□□□ -0.06
TCOF1-201ENST00000323668 CXCR3P49682 368 aa14.68□□□□□ -0.06
TCOF1-201ENST00000323668 CDH15P55291 814 aa14.68□□□□□ -0.06
TCOF1-201ENST00000323668 CEACAM7Q14002 265 aa14.68□□□□□ -0.06
TCOF1-201ENST00000323668 CCNYL2Q5T2Q4 361 aa14.68□□□□□ -0.06
TCOF1-201ENST00000323668 RBM20Q5T481 1227 aaKnown RBP14.68□□□□□ -0.06
TCOF1-201ENST00000323668 DLK2Q6UY11 383 aa14.68□□□□□ -0.06
TCOF1-201ENST00000323668 NECAB2Q7Z6G3 386 aa14.68□□□□□ -0.06
TCOF1-201ENST00000323668 GPR152Q8TDT2 470 aa14.68□□□□□ -0.06
TCOF1-201ENST00000323668 OR52E6Q96RD3 313 aa14.68□□□□□ -0.06
TCOF1-201ENST00000323668 ZNHIT2Q9UHR6 403 aa14.68□□□□□ -0.06
TCOF1-201ENST00000323668 POLR3HQ9Y535 204 aaPredicted RBP14.68□□□□□ -0.06
TCOF1-201ENST00000323668 GMPPBQ9Y5P6 360 aa14.68□□□□□ -0.06
TCOF1-201ENST00000323668 F8W810 466 aa14.68□□□□□ -0.06
TCOF1-201ENST00000323668 SLC28A1O00337 649 aa14.68□□□□□ -0.06
TCOF1-201ENST00000323668 GABRDO14764 452 aa14.68□□□□□ -0.06
TCOF1-201ENST00000323668 MED26O95402 600 aa14.68□□□□□ -0.06
TCOF1-201ENST00000323668 PGK1P00558 417 aa14.68□□□□□ -0.06
TCOF1-201ENST00000323668 ASLP04424 464 aa14.68□□□□□ -0.06
TCOF1-201ENST00000323668 ZNF33AQ06730 810 aa14.68□□□□□ -0.06
TCOF1-201ENST00000323668 OR52E8Q6IFG1 317 aa14.68□□□□□ -0.06
TCOF1-201ENST00000323668 KBTBD2Q8IY47 623 aa14.68□□□□□ -0.06
TCOF1-201ENST00000323668 PACRGLQ8N7B6 248 aa14.68□□□□□ -0.06
TCOF1-201ENST00000323668 MOCOSQ96EN8 888 aa14.68□□□□□ -0.06
TCOF1-201ENST00000323668 CHID1Q9BWS9 393 aa14.68□□□□□ -0.06
TCOF1-201ENST00000323668 DNMT3LQ9UJW3 386 aa14.68□□□□□ -0.06
TCOF1-201ENST00000323668 PDLIM1O00151 329 aa14.68□□□□□ -0.06
TCOF1-201ENST00000323668 PIRO00625 290 aa14.68□□□□□ -0.06
TCOF1-201ENST00000323668 EI24O14681 340 aa14.68□□□□□ -0.06
TCOF1-201ENST00000323668 SIX3O95343 332 aaPredicted RBP14.68□□□□□ -0.06
TCOF1-201ENST00000323668 IFNA14P01570 189 aa14.68□□□□□ -0.06
TCOF1-201ENST00000323668 MTHFRP42898 656 aa14.68□□□□□ -0.06
TCOF1-201ENST00000323668 TSNQ15631 228 aaKnown RBP14.68□□□□□ -0.06
TCOF1-201ENST00000323668 KBTBD6Q86V97 674 aa14.68□□□□□ -0.06
TCOF1-201ENST00000323668 BBS7Q8IWZ6 715 aa14.68□□□□□ -0.06
TCOF1-201ENST00000323668 TMEM130Q8N3G9 435 aa14.68□□□□□ -0.06
TCOF1-201ENST00000323668 SOCS4Q8WXH5 440 aa14.68□□□□□ -0.06
TCOF1-201ENST00000323668 ADPRHL2Q9NX46 363 aa14.68□□□□□ -0.06
TCOF1-201ENST00000323668 SLC27A5Q9Y2P5 690 aa14.68□□□□□ -0.06
TCOF1-201ENST00000323668 TCRBV5S1A1TA0A578 114 aa14.68□□□□□ -0.06
TCOF1-201ENST00000323668 FAM72CH0Y354 149 aa14.68□□□□□ -0.06
TCOF1-201ENST00000323668 EPN2O95208 641 aa14.68□□□□□ -0.06
TCOF1-201ENST00000323668 CDH3P22223 829 aa14.68□□□□□ -0.06
TCOF1-201ENST00000323668 TUFMP49411 452 aaKnown RBP14.68□□□□□ -0.06
TCOF1-201ENST00000323668 TRAF3Q13114 568 aa14.68□□□□□ -0.06
TCOF1-201ENST00000323668 BOP1Q14137 746 aaKnown RBP14.68□□□□□ -0.06
TCOF1-201ENST00000323668 IKBKEQ14164 716 aa14.68□□□□□ -0.06
TCOF1-201ENST00000323668 INTS11Q5TA45 600 aaKnown RBP14.68□□□□□ -0.06
TCOF1-201ENST00000323668 FAM72AQ5TYM5 149 aa14.68□□□□□ -0.06
TCOF1-201ENST00000323668 FAM72DQ6L9T8 149 aa14.68□□□□□ -0.06
TCOF1-201ENST00000323668 FAM72BQ86X60 149 aa14.68□□□□□ -0.06
TCOF1-201ENST00000323668 CFAP52Q8N1V2 620 aa14.68□□□□□ -0.06
TCOF1-201ENST00000323668 RAET1EQ8TD07 263 aa14.68□□□□□ -0.06
TCOF1-201ENST00000323668 POP5Q969H6 163 aaKnown RBP14.68□□□□□ -0.06
TCOF1-201ENST00000323668 OAZ3Q9UMX2 235 aa14.68□□□□□ -0.06
TCOF1-201ENST00000323668 FZD9O00144 591 aa14.67□□□□□ -0.06
TCOF1-201ENST00000323668 CYP2A7P20853 494 aa14.67□□□□□ -0.06
TCOF1-201ENST00000323668 JAK1P23458 1154 aa14.67□□□□□ -0.06
TCOF1-201ENST00000323668 ITGA7Q13683 1181 aa14.67□□□□□ -0.06
TCOF1-201ENST00000323668 TIGD5Q53EQ6 642 aa14.67□□□□□ -0.06
TCOF1-201ENST00000323668 SYT12Q8IV01 421 aa14.67□□□□□ -0.06
TCOF1-201ENST00000323668 TXNDC5Q8NBS9 432 aaKnown RBP14.67□□□□□ -0.06
TCOF1-201ENST00000323668 BRSK1Q8TDC3 778 aa14.67□□□□□ -0.06
TCOF1-201ENST00000323668 TMEM169Q96HH4 297 aa14.67□□□□□ -0.06
TCOF1-201ENST00000323668 GNPTGQ9UJJ9 305 aa14.67□□□□□ -0.06
TCOF1-201ENST00000323668 TMCC3Q9ULS5 477 aa14.67□□□□□ -0.06
TCOF1-201ENST00000323668 MYO18AQ92614 2054 aaKnown RBP14.67□□□□□ -0.06
TCOF1-201ENST00000323668 ARL5CA6NH57 179 aa14.67□□□□□ -0.06
TCOF1-201ENST00000323668 PRMT5O14744 637 aaPredicted RBP14.67□□□□□ -0.06
TCOF1-201ENST00000323668 HOXA2O43364 376 aa14.67□□□□□ -0.06
TCOF1-201ENST00000323668 ACSM2AQ08AH3 577 aa14.67□□□□□ -0.06
TCOF1-201ENST00000323668 RFTN1Q14699 578 aaPredicted RBP14.67□□□□□ -0.06
TCOF1-201ENST00000323668 CPSF6Q16630 551 aaKnown RBP eCLIP14.67□□□□□ -0.063e-9■□□□□ 9
TCOF1-201ENST00000323668 OGFRL1Q5TC84 451 aaPredicted RBP14.67□□□□□ -0.06
TCOF1-201ENST00000323668 ACSM2BQ68CK6 577 aa14.67□□□□□ -0.06
TCOF1-201ENST00000323668 TMEM214Q6NUQ4 689 aaKnown RBP14.67□□□□□ -0.06
TCOF1-201ENST00000323668 KCTD8Q6ZWB6 473 aa14.67□□□□□ -0.06
TCOF1-201ENST00000323668 CEP44Q9C0F1 390 aa14.67□□□□□ -0.06
TCOF1-201ENST00000323668 GMIPQ9P107 970 aa14.67□□□□□ -0.06
TCOF1-201ENST00000323668 PCDHB9Q9Y5E1 797 aa14.67□□□□□ -0.06
TCOF1-201ENST00000323668 U3KQV3 271 aa14.67□□□□□ -0.06
TCOF1-201ENST00000323668 OR51F1A6NGY5 319 aa14.67□□□□□ -0.06
TCOF1-201ENST00000323668 CES1P23141 567 aa14.67□□□□□ -0.06
TCOF1-201ENST00000323668 RRM2P31350 389 aa14.67□□□□□ -0.06
TCOF1-201ENST00000323668 BNIPLQ7Z465 357 aa14.67□□□□□ -0.06
TCOF1-201ENST00000323668 PNPT1Q8TCS8 783 aaKnown RBP14.67□□□□□ -0.06
TCOF1-201ENST00000323668 SMOQ99835 787 aa14.67□□□□□ -0.06
TCOF1-201ENST00000323668 CACNG4Q9UBN1 327 aa14.67□□□□□ -0.06
TCOF1-201ENST00000323668 BTBD19C9JJ37 291 aa14.67□□□□□ -0.06
TCOF1-201ENST00000323668 SDHDO14521 159 aa14.67□□□□□ -0.06
TCOF1-201ENST00000323668 DCLK1O15075 740 aa14.67□□□□□ -0.06
TCOF1-201ENST00000323668 OR56A5P0C7T3 313 aa14.67□□□□□ -0.06
TCOF1-201ENST00000323668 TAF10Q12962 218 aa14.67□□□□□ -0.06
TCOF1-201ENST00000323668 ZBED5Q49AG3 693 aa14.67□□□□□ -0.06
TCOF1-201ENST00000323668 SLC44A2Q8IWA5 706 aaPredicted RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms