RNA–Protein interactions for RNA: ENST00000321545.4

ZNF543-201, Transcript of zinc finger protein 543, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF543, Length 3,659 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF543-201ENST00000321545 SIX3O95343 332 aaPredicted RBP11.3□□□□□ -0.6
ZNF543-201ENST00000321545 ZNF7P17097 686 aaPredicted RBP11.3□□□□□ -0.6
ZNF543-201ENST00000321545 GRIA4P48058 902 aa11.3□□□□□ -0.6
ZNF543-201ENST00000321545 PSAPL1Q6NUJ1 521 aa11.3□□□□□ -0.6
ZNF543-201ENST00000321545 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.3□□□□□ -0.6
ZNF543-201ENST00000321545 SERPINA9Q86WD7 417 aa11.3□□□□□ -0.6
ZNF543-201ENST00000321545 SCML4Q8N228 414 aa11.3□□□□□ -0.6
ZNF543-201ENST00000321545 PTGR2Q8N8N7 351 aaPredicted RBP11.3□□□□□ -0.6
ZNF543-201ENST00000321545 LINGO1Q96FE5 620 aa11.3□□□□□ -0.6
ZNF543-201ENST00000321545 TRMT2BQ96GJ1 504 aaKnown RBP11.3□□□□□ -0.6
ZNF543-201ENST00000321545 TMEM109Q9BVC6 243 aa11.3□□□□□ -0.6
ZNF543-201ENST00000321545 WDR55Q9H6Y2 383 aaPredicted RBP11.3□□□□□ -0.6
ZNF543-201ENST00000321545 WWOXQ9NZC7 414 aa11.3□□□□□ -0.6
ZNF543-201ENST00000321545 ZNF236Q9UL36 1845 aa11.3□□□□□ -0.6
ZNF543-201ENST00000321545 TRBV23OR9-2A0A075B6M9 112 aa11.3□□□□□ -0.6
ZNF543-201ENST00000321545 SNX3O60493 162 aa11.3□□□□□ -0.6
ZNF543-201ENST00000321545 CCNT2O60583 730 aaKnown RBP11.3□□□□□ -0.6
ZNF543-201ENST00000321545 ATP6V1G1O75348 118 aa11.3□□□□□ -0.6
ZNF543-201ENST00000321545 RFPL1O75677 317 aa11.3□□□□□ -0.6
ZNF543-201ENST00000321545 ASGR2P07307 311 aa11.3□□□□□ -0.6
ZNF543-201ENST00000321545 CHRNGP07510 517 aa11.3□□□□□ -0.6
ZNF543-201ENST00000321545 SRCP12931 536 aa11.3□□□□□ -0.6
ZNF543-201ENST00000321545 CNTFP26441 200 aa11.3□□□□□ -0.6
ZNF543-201ENST00000321545 CHRNA6Q15825 494 aa11.3□□□□□ -0.6
ZNF543-201ENST00000321545 PDK4Q16654 411 aa11.3□□□□□ -0.6
ZNF543-201ENST00000321545 MAP7D1Q3KQU3 841 aa11.3□□□□□ -0.6
ZNF543-201ENST00000321545 ERAP2Q6P179 960 aa11.3□□□□□ -0.6
ZNF543-201ENST00000321545 PAQR3Q6TCH7 311 aa11.3□□□□□ -0.6
ZNF543-201ENST00000321545 ALYREFQ86V81 257 aaKnown RBP11.3□□□□□ -0.6
ZNF543-201ENST00000321545 CEP97Q8IW35 865 aa11.3□□□□□ -0.6
ZNF543-201ENST00000321545 SMARCD2Q92925 531 aa11.3□□□□□ -0.6
ZNF543-201ENST00000321545 MTFMTQ96DP5 389 aaKnown RBP11.3□□□□□ -0.6
ZNF543-201ENST00000321545 FEM1CQ96JP0 617 aa11.3□□□□□ -0.6
ZNF543-201ENST00000321545 HEPHQ9BQS7 1158 aa11.3□□□□□ -0.6
ZNF543-201ENST00000321545 TRMT61BQ9BVS5 477 aaKnown RBP11.3□□□□□ -0.6
ZNF543-201ENST00000321545 B4GALT6Q9UBX8 382 aa11.3□□□□□ -0.6
ZNF543-201ENST00000321545 ARHGAP26Q9UNA1 814 aa11.3□□□□□ -0.6
ZNF543-201ENST00000321545 NPEPPSL1A6NEC2 478 aa11.29□□□□□ -0.6
ZNF543-201ENST00000321545 C9JVG2 144 aa11.29□□□□□ -0.6
ZNF543-201ENST00000321545 CFAP99D6REC4 459 aa11.29□□□□□ -0.6
ZNF543-201ENST00000321545 MGRN1O60291 552 aa11.29□□□□□ -0.6
ZNF543-201ENST00000321545 POP4O95707 220 aaKnown RBP11.29□□□□□ -0.6
ZNF543-201ENST00000321545 RB1P06400 928 aa11.29□□□□□ -0.6
ZNF543-201ENST00000321545 LINGO3P0C6S8 592 aa11.29□□□□□ -0.6
ZNF543-201ENST00000321545 TCN1P20061 433 aaPredicted RBP11.29□□□□□ -0.6
ZNF543-201ENST00000321545 MSH3P20585 1137 aa11.29□□□□□ -0.6
ZNF543-201ENST00000321545 PRKCHP24723 683 aa11.29□□□□□ -0.6
ZNF543-201ENST00000321545 EPHA3P29320 983 aa11.29□□□□□ -0.6
ZNF543-201ENST00000321545 NCALDP61601 193 aa11.29□□□□□ -0.6
ZNF543-201ENST00000321545 POLR2LP62875 67 aaKnown RBP11.29□□□□□ -0.6
ZNF543-201ENST00000321545 ABRQ12979 859 aa11.29□□□□□ -0.6
ZNF543-201ENST00000321545 MYLK3Q32MK0 819 aa11.29□□□□□ -0.6
ZNF543-201ENST00000321545 CARD16Q5EG05 197 aa11.29□□□□□ -0.6
ZNF543-201ENST00000321545 SPDYAQ5MJ70 313 aa11.29□□□□□ -0.6
ZNF543-201ENST00000321545 AFTPHQ6ULP2 937 aa11.29□□□□□ -0.6
ZNF543-201ENST00000321545 YTHDF3Q7Z739 585 aaKnown RBP11.29□□□□□ -0.6
ZNF543-201ENST00000321545 TRPC4APQ8TEL6 797 aa11.29□□□□□ -0.6
ZNF543-201ENST00000321545 STYXQ8WUJ0 223 aa11.29□□□□□ -0.6
ZNF543-201ENST00000321545 TDRD1Q9BXT4 1180 aaKnown RBP11.29□□□□□ -0.6
ZNF543-201ENST00000321545 OSBPL6Q9BZF3 934 aa11.29□□□□□ -0.6
ZNF543-201ENST00000321545 ZNF576Q9H609 170 aa11.29□□□□□ -0.6
ZNF543-201ENST00000321545 RXFP1Q9HBX9 757 aa11.29□□□□□ -0.6
ZNF543-201ENST00000321545 LIMD1Q9UGP4 676 aa11.29□□□□□ -0.6
ZNF543-201ENST00000321545 ITM2AO43736 263 aa11.29□□□□□ -0.6
ZNF543-201ENST00000321545 RNASEH1O60930 286 aaKnown RBP11.29□□□□□ -0.6
ZNF543-201ENST00000321545 MPSTP25325 297 aa11.29□□□□□ -0.6
ZNF543-201ENST00000321545 HNF1BP35680 557 aa11.29□□□□□ -0.6
ZNF543-201ENST00000321545 RGS4P49798 205 aa11.29□□□□□ -0.6
ZNF543-201ENST00000321545 HTRA4P83105 476 aaPredicted RBP11.29□□□□□ -0.6
ZNF543-201ENST00000321545 POU4F1Q01851 419 aa11.29□□□□□ -0.6
ZNF543-201ENST00000321545 STARD3Q14849 445 aa11.29□□□□□ -0.6
ZNF543-201ENST00000321545 TSNQ15631 228 aaKnown RBP11.29□□□□□ -0.6
ZNF543-201ENST00000321545 FUT11Q495W5 492 aa11.29□□□□□ -0.6
ZNF543-201ENST00000321545 GALNTL6Q49A17 601 aa11.29□□□□□ -0.6
ZNF543-201ENST00000321545 ACBD5Q5T8D3 534 aaPredicted RBP11.29□□□□□ -0.6
ZNF543-201ENST00000321545 ADCK2Q7Z695 626 aa11.29□□□□□ -0.6
ZNF543-201ENST00000321545 TMEM135Q86UB9 458 aa11.29□□□□□ -0.6
ZNF543-201ENST00000321545 LCA5Q86VQ0 697 aa11.29□□□□□ -0.6
ZNF543-201ENST00000321545 NPAS3Q8IXF0 933 aa11.29□□□□□ -0.6
ZNF543-201ENST00000321545 OR14C36Q8NHC7 312 aa11.29□□□□□ -0.6
ZNF543-201ENST00000321545 SH3KBP1Q96B97 665 aa11.29□□□□□ -0.6
ZNF543-201ENST00000321545 RPP25Q9BUL9 199 aaKnown RBP11.29□□□□□ -0.6
ZNF543-201ENST00000321545 ILKAPQ9H0C8 392 aaPredicted RBP11.29□□□□□ -0.6
ZNF543-201ENST00000321545 ELOVL2Q9NXB9 296 aa11.29□□□□□ -0.6
ZNF543-201ENST00000321545 MOCS1Q9NZB8 636 aa11.29□□□□□ -0.6
ZNF543-201ENST00000321545 LNPEPQ9UIQ6 1025 aa11.29□□□□□ -0.6
ZNF543-201ENST00000321545 INTS6Q9UL03 887 aaKnown RBP11.29□□□□□ -0.6
ZNF543-201ENST00000321545 TBC1D3DA0A087WVF3 549 aa11.29□□□□□ -0.6
ZNF543-201ENST00000321545 TBC1D3IA0A087WXS9 549 aa11.29□□□□□ -0.6
ZNF543-201ENST00000321545 TBC1D3EA0A087X179 549 aa11.29□□□□□ -0.6
ZNF543-201ENST00000321545 TBC1D3KA0A087X1G2 549 aa11.29□□□□□ -0.6
ZNF543-201ENST00000321545 KLHL33A6NCF5 533 aa11.29□□□□□ -0.6
ZNF543-201ENST00000321545 TBC1D3FA6NER0 549 aaPredicted RBP11.29□□□□□ -0.6
ZNF543-201ENST00000321545 TBC1D3LB9A6J9 549 aa11.29□□□□□ -0.6
ZNF543-201ENST00000321545 FFAR3O14843 346 aa11.29□□□□□ -0.6
ZNF543-201ENST00000321545 AIM2O14862 343 aa11.29□□□□□ -0.6
ZNF543-201ENST00000321545 GPR42O15529 346 aa11.29□□□□□ -0.6
ZNF543-201ENST00000321545 PLIN3O60664 434 aa11.29□□□□□ -0.6
ZNF543-201ENST00000321545 SMNDC1O75940 238 aaKnown RBP eCLIP11.29□□□□□ -0.6
ZNF543-201ENST00000321545 SERPIND1P05546 499 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms