RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 DSC2Q02487 901 aa14.16□□□□□ -0.14
PABPC1-201ENST00000318607 CREB5Q02930 508 aa14.16□□□□□ -0.14
PABPC1-201ENST00000318607 STXBP5Q5T5C0 1151 aa14.16□□□□□ -0.14
PABPC1-201ENST00000318607 CCDC103Q8IW40 242 aa14.16□□□□□ -0.14
PABPC1-201ENST00000318607 UBE2J2Q8N2K1 259 aa14.16□□□□□ -0.14
PABPC1-201ENST00000318607 FAM86B1Q8N7N1 296 aa14.16□□□□□ -0.14
PABPC1-201ENST00000318607 AGBL3Q8NEM8 1001 aa14.16□□□□□ -0.14
PABPC1-201ENST00000318607 ITFG1Q8TB96 612 aa14.16□□□□□ -0.14
PABPC1-201ENST00000318607 DNAJB3Q8WWF6 145 aa14.16□□□□□ -0.14
PABPC1-201ENST00000318607 TMBIM1Q969X1 311 aa14.16□□□□□ -0.14
PABPC1-201ENST00000318607 CCDC68Q9H2F9 335 aa14.16□□□□□ -0.14
PABPC1-201ENST00000318607 BPIFA1Q9NP55 256 aa14.16□□□□□ -0.14
PABPC1-201ENST00000318607 PALMDQ9NP74 551 aa14.16□□□□□ -0.14
PABPC1-201ENST00000318607 MRPL40Q9NQ50 206 aaKnown RBP14.16□□□□□ -0.14
PABPC1-201ENST00000318607 CASS4Q9NQ75 786 aa14.16□□□□□ -0.14
PABPC1-201ENST00000318607 KLQ9UEF7 1012 aa14.16□□□□□ -0.14
PABPC1-201ENST00000318607 GPC6Q9Y625 555 aaPredicted RBP14.16□□□□□ -0.14
PABPC1-201ENST00000318607 DBTP11182 482 aaKnown RBP14.16□□□□□ -0.14
PABPC1-201ENST00000318607 SLC6A2P23975 617 aa14.16□□□□□ -0.14
PABPC1-201ENST00000318607 CCNA1P78396 465 aa14.16□□□□□ -0.14
PABPC1-201ENST00000318607 PTPRRQ15256 657 aa14.16□□□□□ -0.14
PABPC1-201ENST00000318607 SF3B4Q15427 424 aaKnown RBP eCLIP14.16□□□□□ -0.143e-16■■■■■ 30.3
PABPC1-201ENST00000318607 NOL9Q5SY16 702 aaKnown RBP14.16□□□□□ -0.14
PABPC1-201ENST00000318607 IQSEC1Q6DN90 963 aa14.16□□□□□ -0.14
PABPC1-201ENST00000318607 NEK10Q6ZWH5 1172 aa14.16□□□□□ -0.14
PABPC1-201ENST00000318607 SLC22A16Q86VW1 577 aa14.16□□□□□ -0.14
PABPC1-201ENST00000318607 ANKRD46Q86W74 232 aa14.16□□□□□ -0.14
PABPC1-201ENST00000318607 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.16□□□□□ -0.14
PABPC1-201ENST00000318607 FRS2Q8WU20 508 aa14.16□□□□□ -0.14
PABPC1-201ENST00000318607 RPL3LQ92901 407 aaKnown RBP14.16□□□□□ -0.14
PABPC1-201ENST00000318607 DMRTB1Q96MA1 342 aa14.16□□□□□ -0.14
PABPC1-201ENST00000318607 SPON2Q9BUD6 331 aa14.16□□□□□ -0.14
PABPC1-201ENST00000318607 RABL2AQ9UBK7 228 aaPredicted RBP14.16□□□□□ -0.14
PABPC1-201ENST00000318607 KIAA1257Q9ULG3 409 aa14.16□□□□□ -0.14
PABPC1-201ENST00000318607 UPK3BL1B0FP48 263 aa14.15□□□□□ -0.14
PABPC1-201ENST00000318607 UPK3BL2E5RIL1 263 aa14.15□□□□□ -0.14
PABPC1-201ENST00000318607 GPR39O43194 453 aa14.15□□□□□ -0.14
PABPC1-201ENST00000318607 H2AFYO75367 372 aaKnown RBP14.15□□□□□ -0.14
PABPC1-201ENST00000318607 NPR3P17342 541 aa14.15□□□□□ -0.14
PABPC1-201ENST00000318607 NPY2RP49146 381 aa14.15□□□□□ -0.14
PABPC1-201ENST00000318607 PLA2G16P53816 162 aa14.15□□□□□ -0.14
PABPC1-201ENST00000318607 NCS1P62166 190 aa14.15□□□□□ -0.14
PABPC1-201ENST00000318607 ADAM17P78536 824 aa14.15□□□□□ -0.14
PABPC1-201ENST00000318607 IRF5Q13568 498 aa14.15□□□□□ -0.14
PABPC1-201ENST00000318607 ATP6AP1LQ52LC2 224 aa14.15□□□□□ -0.14
PABPC1-201ENST00000318607 ZNF362Q5T0B9 420 aaPredicted RBP14.15□□□□□ -0.14
PABPC1-201ENST00000318607 ABHD11Q8NFV4 315 aa14.15□□□□□ -0.14
PABPC1-201ENST00000318607 OR7A2PQ8NGA2 310 aa14.15□□□□□ -0.14
PABPC1-201ENST00000318607 HM13Q8TCT9 377 aa14.15□□□□□ -0.14
PABPC1-201ENST00000318607 TRPM4Q8TD43 1214 aa14.15□□□□□ -0.14
PABPC1-201ENST00000318607 BIRC7Q96CA5 298 aa14.15□□□□□ -0.14
PABPC1-201ENST00000318607 TNIP3Q96KP6 325 aa14.15□□□□□ -0.14
PABPC1-201ENST00000318607 FUNDC2Q9BWH2 189 aa14.15□□□□□ -0.14
PABPC1-201ENST00000318607 GALPQ9UBC7 116 aa14.15□□□□□ -0.14
PABPC1-201ENST00000318607 AFF4Q9UHB7 1163 aaKnown RBP14.15□□□□□ -0.14
PABPC1-201ENST00000318607 RNF112Q9ULX5 631 aa14.15□□□□□ -0.14
PABPC1-201ENST00000318607 PCDHB3Q9Y5E6 796 aa14.15□□□□□ -0.14
PABPC1-201ENST00000318607 ACTL7AQ9Y615 435 aa14.15□□□□□ -0.14
PABPC1-201ENST00000318607 KIAA1217Q5T5P2 1943 aa14.15□□□□□ -0.14
PABPC1-201ENST00000318607 A8MX80 341 aa14.15□□□□□ -0.14
PABPC1-201ENST00000318607 ARVCFO00192 962 aa14.15□□□□□ -0.14
PABPC1-201ENST00000318607 CYP7B1O75881 506 aa14.15□□□□□ -0.14
PABPC1-201ENST00000318607 C22orf31O95567 290 aa14.15□□□□□ -0.14
PABPC1-201ENST00000318607 ZNF682O95780 498 aa14.15□□□□□ -0.14
PABPC1-201ENST00000318607 HLA-DQB2P05538 268 aa14.15□□□□□ -0.14
PABPC1-201ENST00000318607 GLUD2P49448 558 aa14.15□□□□□ -0.14
PABPC1-201ENST00000318607 EPS8Q12929 822 aa14.15□□□□□ -0.14
PABPC1-201ENST00000318607 TTLL4Q14679 1199 aa14.15□□□□□ -0.14
PABPC1-201ENST00000318607 GCNT7Q6ZNI0 430 aa14.15□□□□□ -0.14
PABPC1-201ENST00000318607 FAM126BQ8IXS8 530 aa14.15□□□□□ -0.14
PABPC1-201ENST00000318607 POC5Q8NA72 575 aa14.15□□□□□ -0.14
PABPC1-201ENST00000318607 GPR78Q96P69 363 aa14.15□□□□□ -0.14
PABPC1-201ENST00000318607 TOR3AQ9H497 397 aa14.15□□□□□ -0.14
PABPC1-201ENST00000318607 TCAF1Q9Y4C2 921 aa14.15□□□□□ -0.14
PABPC1-201ENST00000318607 KNL1Q8NG31 2342 aa14.15□□□□□ -0.14
PABPC1-201ENST00000318607 SMIM28A0A1B0GU29 152 aa14.14□□□□□ -0.15
PABPC1-201ENST00000318607 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.14□□□□□ -0.15
PABPC1-201ENST00000318607 AZIN1O14977 448 aa14.14□□□□□ -0.15
PABPC1-201ENST00000318607 DYNC1LI2O43237 492 aaPredicted RBP14.14□□□□□ -0.15
PABPC1-201ENST00000318607 RHOBTB1O94844 696 aa14.14□□□□□ -0.15
PABPC1-201ENST00000318607 GJA8P48165 433 aa14.14□□□□□ -0.15
PABPC1-201ENST00000318607 GHRHRQ02643 423 aa14.14□□□□□ -0.15
PABPC1-201ENST00000318607 VAC14Q08AM6 782 aa14.14□□□□□ -0.15
PABPC1-201ENST00000318607 INCA1Q0VD86 236 aa14.14□□□□□ -0.15
PABPC1-201ENST00000318607 PDCD4Q53EL6 469 aaKnown RBP14.14□□□□□ -0.15
PABPC1-201ENST00000318607 ZDHHC13Q8IUH4 622 aa14.14□□□□□ -0.15
PABPC1-201ENST00000318607 OR13C4Q8NGS5 318 aa14.14□□□□□ -0.15
PABPC1-201ENST00000318607 NDNFQ8TB73 568 aa14.14□□□□□ -0.15
PABPC1-201ENST00000318607 FAM162AQ96A26 154 aa14.14□□□□□ -0.15
PABPC1-201ENST00000318607 PTERQ96BW5 349 aa14.14□□□□□ -0.15
PABPC1-201ENST00000318607 RMDN1Q96DB5 314 aa14.14□□□□□ -0.15
PABPC1-201ENST00000318607 CCM2LQ9NUG4 571 aaPredicted RBP14.14□□□□□ -0.15
PABPC1-201ENST00000318607 SNX8Q9Y5X2 465 aa14.14□□□□□ -0.15
PABPC1-201ENST00000318607 ARL5AQ9Y689 179 aa14.14□□□□□ -0.15
PABPC1-201ENST00000318607 AXIN1O15169 862 aa14.14□□□□□ -0.15
PABPC1-201ENST00000318607 MITFO75030 526 aaPredicted RBP14.14□□□□□ -0.15
PABPC1-201ENST00000318607 CNOT3O75175 753 aaKnown RBP14.14□□□□□ -0.15
PABPC1-201ENST00000318607 PROZP22891 400 aa14.14□□□□□ -0.15
PABPC1-201ENST00000318607 TRPC1P48995 793 aa14.14□□□□□ -0.15
PABPC1-201ENST00000318607 TAF6P49848 677 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms