RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 NT5DC3Q86UY8 548 aa17.66■□□□□ 0.42
TPM1-203ENST00000317516 PIM3Q86V86 326 aa17.66■□□□□ 0.42
TPM1-203ENST00000317516 GALNT13Q8IUC8 556 aa17.66■□□□□ 0.42
TPM1-203ENST00000317516 CNTD1Q8N815 330 aa17.66■□□□□ 0.42
TPM1-203ENST00000317516 CMKLR1Q99788 373 aa17.66■□□□□ 0.42
TPM1-203ENST00000317516 FAM83DQ9H4H8 585 aa17.66■□□□□ 0.42
TPM1-203ENST00000317516 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.66■□□□□ 0.42
TPM1-203ENST00000317516 ATRXP46100 2492 aa17.66■□□□□ 0.42
TPM1-203ENST00000317516 RP1P56715 2156 aa17.65■□□□□ 0.42
TPM1-203ENST00000317516 INPP4BO15327 924 aa17.65■□□□□ 0.42
TPM1-203ENST00000317516 ECEL1O95672 775 aa17.65■□□□□ 0.42
TPM1-203ENST00000317516 MMP2P08253 660 aa17.65■□□□□ 0.42
TPM1-203ENST00000317516 COMTP21964 271 aa17.65■□□□□ 0.42
TPM1-203ENST00000317516 ALDH4A1P30038 563 aa17.65■□□□□ 0.42
TPM1-203ENST00000317516 UGT1A5P35504 534 aa17.65■□□□□ 0.42
TPM1-203ENST00000317516 ACTR1BP42025 376 aa17.65■□□□□ 0.42
TPM1-203ENST00000317516 MAGEA1P43355 309 aa17.65■□□□□ 0.42
TPM1-203ENST00000317516 GPR3P46089 330 aa17.65■□□□□ 0.42
TPM1-203ENST00000317516 SPINT3P49223 89 aa17.65■□□□□ 0.42
TPM1-203ENST00000317516 MAZP56270 477 aaKnown RBP17.65■□□□□ 0.42
TPM1-203ENST00000317516 ACTR1AP61163 376 aa17.65■□□□□ 0.42
TPM1-203ENST00000317516 B4GALNT1Q00973 533 aa17.65■□□□□ 0.42
TPM1-203ENST00000317516 ZFP36L1Q07352 338 aaKnown RBP17.65■□□□□ 0.42
TPM1-203ENST00000317516 ZBTB17Q13105 803 aa17.65■□□□□ 0.42
TPM1-203ENST00000317516 PYCR3Q53H96 274 aa17.65■□□□□ 0.42
TPM1-203ENST00000317516 SARM1Q6SZW1 724 aa17.65■□□□□ 0.42
TPM1-203ENST00000317516 MARK2Q7KZI7 788 aaKnown RBP17.65■□□□□ 0.42
TPM1-203ENST00000317516 SFTPA2Q8IWL1 248 aa17.65■□□□□ 0.42
TPM1-203ENST00000317516 LSM14AQ8ND56 463 aaKnown RBP17.65■□□□□ 0.42
TPM1-203ENST00000317516 COX14Q96I36 57 aa17.65■□□□□ 0.42
TPM1-203ENST00000317516 AGAP3Q96P47 875 aa17.65■□□□□ 0.42
TPM1-203ENST00000317516 LUC7LQ9NQ29 371 aaKnown RBP17.65■□□□□ 0.42
TPM1-203ENST00000317516 RAD18Q9NS91 495 aa17.65■□□□□ 0.42
TPM1-203ENST00000317516 SEPT10Q9P0V9 454 aa17.65■□□□□ 0.42
TPM1-203ENST00000317516 VPS18Q9P253 973 aa17.65■□□□□ 0.42
TPM1-203ENST00000317516 ATXN7L1Q9ULK2 861 aaPredicted RBP17.65■□□□□ 0.42
TPM1-203ENST00000317516 PCDHGA7Q9Y5G6 932 aa17.65■□□□□ 0.42
TPM1-203ENST00000317516 LRRK1Q38SD2 2015 aa17.64■□□□□ 0.41
TPM1-203ENST00000317516 TK2O00142 265 aa17.64■□□□□ 0.41
TPM1-203ENST00000317516 CPNE6O95741 557 aa17.64■□□□□ 0.41
TPM1-203ENST00000317516 DYNLT1P63172 113 aa17.64■□□□□ 0.41
TPM1-203ENST00000317516 SPA17Q15506 151 aa17.64■□□□□ 0.41
TPM1-203ENST00000317516 AMZ1Q400G9 498 aa17.64■□□□□ 0.41
TPM1-203ENST00000317516 MAP9Q49MG5 647 aa17.64■□□□□ 0.41
TPM1-203ENST00000317516 ZNF438Q7Z4V0 828 aa17.64■□□□□ 0.41
TPM1-203ENST00000317516 PTCD2Q8WV60 388 aaKnown RBP17.64■□□□□ 0.41
TPM1-203ENST00000317516 IMP4Q96G21 291 aaKnown RBP17.64■□□□□ 0.41
TPM1-203ENST00000317516 OLFM3Q96PB7 478 aa17.64■□□□□ 0.41
TPM1-203ENST00000317516 SRPK1Q96SB4 655 aaKnown RBP17.64■□□□□ 0.41
TPM1-203ENST00000317516 AGAP2Q99490 1192 aa17.64■□□□□ 0.41
TPM1-203ENST00000317516 SLC25A51Q9H1U9 297 aa17.64■□□□□ 0.41
TPM1-203ENST00000317516 RMI1Q9H9A7 625 aa17.64■□□□□ 0.41
TPM1-203ENST00000317516 ZFYVE1Q9HBF4 777 aa17.64■□□□□ 0.41
TPM1-203ENST00000317516 ZNHIT2Q9UHR6 403 aa17.64■□□□□ 0.41
TPM1-203ENST00000317516 LOXL2Q9Y4K0 774 aa17.64■□□□□ 0.41
TPM1-203ENST00000317516 MTSS1O43312 755 aa17.63■□□□□ 0.41
TPM1-203ENST00000317516 B4GAT1O43505 415 aa17.63■□□□□ 0.41
TPM1-203ENST00000317516 PSTPIP1O43586 416 aa17.63■□□□□ 0.41
TPM1-203ENST00000317516 HADHBP55084 474 aaKnown RBP17.63■□□□□ 0.41
TPM1-203ENST00000317516 OR1D5P58170 312 aa17.63■□□□□ 0.41
TPM1-203ENST00000317516 CDK18Q07002 472 aa17.63■□□□□ 0.41
TPM1-203ENST00000317516 COL9A2Q14055 689 aaPredicted RBP17.63■□□□□ 0.41
TPM1-203ENST00000317516 NR1D2Q14995 579 aa17.63■□□□□ 0.41
TPM1-203ENST00000317516 SLC14A2Q15849 920 aa17.63■□□□□ 0.41
TPM1-203ENST00000317516 TEX44Q53QW1 395 aa17.63■□□□□ 0.41
TPM1-203ENST00000317516 PHF19Q5T6S3 580 aa17.63■□□□□ 0.41
TPM1-203ENST00000317516 HENMT1Q5T8I9 393 aaKnown RBP17.63■□□□□ 0.41
TPM1-203ENST00000317516 MFSD7Q6UXD7 560 aa17.63■□□□□ 0.41
TPM1-203ENST00000317516 NPNTQ6UXI9 565 aa17.63■□□□□ 0.41
TPM1-203ENST00000317516 TRIM74Q86UV6 250 aa17.63■□□□□ 0.41
TPM1-203ENST00000317516 JAMLQ86YT9 394 aa17.63■□□□□ 0.41
TPM1-203ENST00000317516 CCDC170Q8IYT3 715 aa17.63■□□□□ 0.41
TPM1-203ENST00000317516 NAGSQ8N159 534 aa17.63■□□□□ 0.41
TPM1-203ENST00000317516 BBC3Q96PG8 261 aaPredicted RBP17.63■□□□□ 0.41
TPM1-203ENST00000317516 MAGEE1Q9HCI5 957 aa17.63■□□□□ 0.41
TPM1-203ENST00000317516 PISDQ9UG56 409 aa17.63■□□□□ 0.41
TPM1-203ENST00000317516 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.63■□□□□ 0.41
TPM1-203ENST00000317516 HYOU1Q9Y4L1 999 aa17.63■□□□□ 0.41
TPM1-203ENST00000317516 ALG6Q9Y672 507 aa17.63■□□□□ 0.41
TPM1-203ENST00000317516 NBEAQ8NFP9 2946 aa17.63■□□□□ 0.41
TPM1-203ENST00000317516 ANKRD36A6QL64 1941 aa17.62■□□□□ 0.41
TPM1-203ENST00000317516 PMS2P1A4D2B8 440 aa17.62■□□□□ 0.41
TPM1-203ENST00000317516 ATXN7O15265 892 aaPredicted RBP17.62■□□□□ 0.41
TPM1-203ENST00000317516 NVLO15381 856 aaKnown RBP17.62■□□□□ 0.41
TPM1-203ENST00000317516 ZRANB2O95218 330 aaKnown RBP eCLIP17.62■□□□□ 0.41
TPM1-203ENST00000317516 SLC5A2P31639 672 aa17.62■□□□□ 0.41
TPM1-203ENST00000317516 CDKN2BP42772 138 aa17.62■□□□□ 0.41
TPM1-203ENST00000317516 TNNT3P45378 269 aaPredicted RBP17.62■□□□□ 0.41
TPM1-203ENST00000317516 VAC14Q08AM6 782 aa17.62■□□□□ 0.41
TPM1-203ENST00000317516 GALNT3Q14435 633 aa17.62■□□□□ 0.41
TPM1-203ENST00000317516 USP53Q70EK8 1073 aa17.62■□□□□ 0.41
TPM1-203ENST00000317516 KDELC2Q7Z4H8 507 aa17.62■□□□□ 0.41
TPM1-203ENST00000317516 RCOR2Q8IZ40 523 aa17.62■□□□□ 0.41
TPM1-203ENST00000317516 TFB1MQ8WVM0 346 aaKnown RBP17.62■□□□□ 0.41
TPM1-203ENST00000317516 DPYSL5Q9BPU6 564 aa17.62■□□□□ 0.41
TPM1-203ENST00000317516 CEP41Q9BYV8 373 aa17.62■□□□□ 0.41
TPM1-203ENST00000317516 GLOD4Q9HC38 313 aa17.62■□□□□ 0.41
TPM1-203ENST00000317516 A0A0A6YYK5 440 aaPredicted RBP17.61■□□□□ 0.41
TPM1-203ENST00000317516 CST8O60676 142 aa17.61■□□□□ 0.41
TPM1-203ENST00000317516 ATP1A1P05023 1023 aaKnown RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms