RNA–Protein interactions for RNA: ENST00000314845.7

AMBRA1-201, Transcript of autophagy and beclin 1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AMBRA1, Length 5,023 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-201ENST00000314845 SMYD1Q8NB12 490 aa11.93□□□□□ -0.5
AMBRA1-201ENST00000314845 MCRS1Q96EZ8 462 aa11.93□□□□□ -0.5
AMBRA1-201ENST00000314845 C6orf62Q9GZU0 229 aaPredicted RBP11.93□□□□□ -0.5
AMBRA1-201ENST00000314845 DPEP3Q9H4B8 488 aa11.93□□□□□ -0.5
AMBRA1-201ENST00000314845 GMPPBQ9Y5P6 360 aa11.93□□□□□ -0.5
AMBRA1-201ENST00000314845 ASMTP46597 345 aa11.93□□□□□ -0.5
AMBRA1-201ENST00000314845 CSNK2BP67870 215 aa11.93□□□□□ -0.5
AMBRA1-201ENST00000314845 ILF3Q12906 894 aaKnown RBP eCLIP11.93□□□□□ -0.58e-7■■■□□ 17.4
AMBRA1-201ENST00000314845 SEMA5AQ13591 1074 aa11.93□□□□□ -0.5
AMBRA1-201ENST00000314845 NRF1Q16656 503 aa11.93□□□□□ -0.5
AMBRA1-201ENST00000314845 ATP13A5Q4VNC0 1218 aa11.93□□□□□ -0.5
AMBRA1-201ENST00000314845 ZNF618Q5T7W0 954 aa11.93□□□□□ -0.5
AMBRA1-201ENST00000314845 CPTPQ5TA50 214 aa11.93□□□□□ -0.5
AMBRA1-201ENST00000314845 TPGS2Q68CL5 300 aa11.93□□□□□ -0.5
AMBRA1-201ENST00000314845 MFSD5Q6N075 450 aa11.93□□□□□ -0.5
AMBRA1-201ENST00000314845 LINGO4Q6UY18 593 aa11.93□□□□□ -0.5
AMBRA1-201ENST00000314845 ANKS1BQ7Z6G8 1248 aa11.93□□□□□ -0.5
AMBRA1-201ENST00000314845 BRI3BPQ8WY22 251 aa11.93□□□□□ -0.5
AMBRA1-201ENST00000314845 REXO5Q96IC2 774 aaKnown RBP11.93□□□□□ -0.5
AMBRA1-201ENST00000314845 SPRTNQ9H040 489 aaPredicted RBP11.93□□□□□ -0.5
AMBRA1-201ENST00000314845 SGK2Q9HBY8 427 aa11.93□□□□□ -0.5
AMBRA1-201ENST00000314845 TRMT13Q9NUP7 481 aaKnown RBP11.93□□□□□ -0.5
AMBRA1-201ENST00000314845 CLN6Q9NWW5 311 aa11.93□□□□□ -0.5
AMBRA1-201ENST00000314845 LRRC72A6NJI9 287 aa11.93□□□□□ -0.5
AMBRA1-201ENST00000314845 FZD9O00144 591 aa11.93□□□□□ -0.5
AMBRA1-201ENST00000314845 PMM2O15305 246 aa11.93□□□□□ -0.5
AMBRA1-201ENST00000314845 PRAMEF1O95521 474 aa11.93□□□□□ -0.5
AMBRA1-201ENST00000314845 RPL4P36578 427 aaKnown RBP11.93□□□□□ -0.5
AMBRA1-201ENST00000314845 UGT2B15P54855 530 aa11.93□□□□□ -0.5
AMBRA1-201ENST00000314845 ELF3P78545 371 aaPredicted RBP11.93□□□□□ -0.5
AMBRA1-201ENST00000314845 COX10Q12887 443 aa11.93□□□□□ -0.5
AMBRA1-201ENST00000314845 TRAF3Q13114 568 aa11.93□□□□□ -0.5
AMBRA1-201ENST00000314845 DHDDSQ86SQ9 333 aa11.93□□□□□ -0.5
AMBRA1-201ENST00000314845 CACTIN-AS1Q8N1I8 211 aa11.93□□□□□ -0.5
AMBRA1-201ENST00000314845 OR14C36Q8NHC7 312 aa11.93□□□□□ -0.5
AMBRA1-201ENST00000314845 BTBD9Q96Q07 612 aa11.93□□□□□ -0.5
AMBRA1-201ENST00000314845 TEFMQ96QE5 360 aaKnown RBP11.93□□□□□ -0.5
AMBRA1-201ENST00000314845 TCF25Q9BQ70 676 aa11.93□□□□□ -0.5
AMBRA1-201ENST00000314845 FNDC11Q9BVV2 318 aa11.93□□□□□ -0.5
AMBRA1-201ENST00000314845 GPR88Q9GZN0 384 aa11.93□□□□□ -0.5
AMBRA1-201ENST00000314845 SLC45A1Q9Y2W3 748 aa11.93□□□□□ -0.5
AMBRA1-201ENST00000314845 Q9Y3F1 56 aa11.93□□□□□ -0.5
AMBRA1-201ENST00000314845 N6AMT1Q9Y5N5 214 aa11.93□□□□□ -0.5
AMBRA1-201ENST00000314845 ZFP37Q9Y6Q3 630 aaPredicted RBP11.93□□□□□ -0.5
AMBRA1-201ENST00000314845 DHRS12A0PJE2 317 aa11.93□□□□□ -0.5
AMBRA1-201ENST00000314845 SLC38A8A6NNN8 435 aa11.93□□□□□ -0.5
AMBRA1-201ENST00000314845 SNAP91O60641 907 aa11.93□□□□□ -0.5
AMBRA1-201ENST00000314845 LRATO95237 230 aa11.93□□□□□ -0.5
AMBRA1-201ENST00000314845 CCNA2P20248 432 aa11.93□□□□□ -0.5
AMBRA1-201ENST00000314845 TPP2P29144 1249 aaPredicted RBP11.93□□□□□ -0.5
AMBRA1-201ENST00000314845 USP4Q13107 963 aa11.93□□□□□ -0.5
AMBRA1-201ENST00000314845 GALNT13Q8IUC8 556 aa11.93□□□□□ -0.5
AMBRA1-201ENST00000314845 ZNF671Q8TAW3 534 aa11.93□□□□□ -0.5
AMBRA1-201ENST00000314845 GPR21Q99679 349 aa11.93□□□□□ -0.5
AMBRA1-201ENST00000314845 HOPXQ9BPY8 73 aaPredicted RBP11.93□□□□□ -0.5
AMBRA1-201ENST00000314845 APOBEC3GQ9HC16 384 aaKnown RBP11.93□□□□□ -0.5
AMBRA1-201ENST00000314845 MIOSQ9NXC5 875 aa11.93□□□□□ -0.5
AMBRA1-201ENST00000314845 NOCTQ9UK39 431 aaKnown RBP11.93□□□□□ -0.5
AMBRA1-201ENST00000314845 FBXW11Q9UKB1 542 aa11.93□□□□□ -0.5
AMBRA1-201ENST00000314845 SAMHD1Q9Y3Z3 626 aaKnown RBP11.93□□□□□ -0.5
AMBRA1-201ENST00000314845 PCDHGB3Q9Y5G1 929 aa11.93□□□□□ -0.5
AMBRA1-201ENST00000314845 COLEC10Q9Y6Z7 277 aa11.93□□□□□ -0.5
AMBRA1-201ENST00000314845 NPEPPSL1A6NEC2 478 aa11.92□□□□□ -0.5
AMBRA1-201ENST00000314845 EFCAB10A6NFE3 127 aa11.92□□□□□ -0.5
AMBRA1-201ENST00000314845 SUV39H1O43463 412 aa11.92□□□□□ -0.5
AMBRA1-201ENST00000314845 NRP2O60462 931 aa11.92□□□□□ -0.5
AMBRA1-201ENST00000314845 LYPLA1O75608 230 aaPredicted RBP11.92□□□□□ -0.5
AMBRA1-201ENST00000314845 ITPKAP23677 461 aa11.92□□□□□ -0.5
AMBRA1-201ENST00000314845 WASP42768 502 aa11.92□□□□□ -0.5
AMBRA1-201ENST00000314845 HADHBP55084 474 aaKnown RBP11.92□□□□□ -0.5
AMBRA1-201ENST00000314845 CRHR2Q13324 411 aa11.92□□□□□ -0.5
AMBRA1-201ENST00000314845 TTC27Q6P3X3 843 aa11.92□□□□□ -0.5
AMBRA1-201ENST00000314845 C11orf88Q6PI97 169 aa11.92□□□□□ -0.5
AMBRA1-201ENST00000314845 TMPRSS11BQ86T26 416 aa11.92□□□□□ -0.5
AMBRA1-201ENST00000314845 IFNL1Q8IU54 200 aa11.92□□□□□ -0.5
AMBRA1-201ENST00000314845 ZNF567Q8N184 647 aa11.92□□□□□ -0.5
AMBRA1-201ENST00000314845 MECRQ9BV79 373 aa11.92□□□□□ -0.5
AMBRA1-201ENST00000314845 ZNF180Q9UJW8 692 aa11.92□□□□□ -0.5
AMBRA1-201ENST00000314845 MRTO4Q9UKD2 239 aaKnown RBP11.92□□□□□ -0.5
AMBRA1-201ENST00000314845 POLR3HQ9Y535 204 aaPredicted RBP11.92□□□□□ -0.5
AMBRA1-201ENST00000314845 PCDHGC4Q9Y5F7 938 aa11.92□□□□□ -0.5
AMBRA1-201ENST00000314845 CCNYL3P0C7X3 344 aa11.92□□□□□ -0.5
AMBRA1-201ENST00000314845 LIMK2P53671 638 aa11.92□□□□□ -0.5
AMBRA1-201ENST00000314845 ECHDC2Q86YB7 292 aa11.92□□□□□ -0.5
AMBRA1-201ENST00000314845 C7orf61Q8IZ16 206 aa11.92□□□□□ -0.5
AMBRA1-201ENST00000314845 ST13P5Q8NFI4 369 aaPredicted RBP11.92□□□□□ -0.5
AMBRA1-201ENST00000314845 APOLD1Q96LR9 279 aa11.92□□□□□ -0.5
AMBRA1-201ENST00000314845 TSSK3Q96PN8 268 aa11.92□□□□□ -0.5
AMBRA1-201ENST00000314845 RACGAP1Q9H0H5 632 aa11.92□□□□□ -0.5
AMBRA1-201ENST00000314845 EXO5Q9H790 373 aa11.92□□□□□ -0.5
AMBRA1-201ENST00000314845 PNPOQ9NVS9 261 aa11.92□□□□□ -0.5
AMBRA1-201ENST00000314845 GULP1Q9UBP9 304 aa11.92□□□□□ -0.5
AMBRA1-201ENST00000314845 PIGRP01833 764 aa11.92□□□□□ -0.5
AMBRA1-201ENST00000314845 TRBC1P01850 177 aa11.92□□□□□ -0.5
AMBRA1-201ENST00000314845 FGFR3P22607 806 aa11.92□□□□□ -0.5
AMBRA1-201ENST00000314845 KIR3DL1P43629 444 aa11.92□□□□□ -0.5
AMBRA1-201ENST00000314845 SLC7A2P52569 658 aa11.92□□□□□ -0.5
AMBRA1-201ENST00000314845 C9orf64Q5T6V5 341 aa11.92□□□□□ -0.5
AMBRA1-201ENST00000314845 FAM220AQ7Z4H9 259 aa11.92□□□□□ -0.5
AMBRA1-201ENST00000314845 LRTM1Q9HBL6 345 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms