RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 IRS2Q9Y4H2 1338 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 MANSC4A6NHS7 340 aaPredicted RBP8.8□□□□□ -1
COL6A5-202ENST00000312481 MGAT1P26572 445 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 PSMB9P28065 219 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 NAGLUP54802 743 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 BTG3Q14201 252 aaPredicted RBP8.8□□□□□ -1
COL6A5-202ENST00000312481 ACOT1Q86TX2 421 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 MCFD2Q8NI22 146 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 CYP2W1Q8TAV3 490 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 HPS1Q92902 700 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 MMP27Q9H306 513 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 POMKQ9H5K3 350 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 ALG13Q9NP73 1137 aaKnown RBP8.8□□□□□ -1
COL6A5-202ENST00000312481 ITM2CQ9NQX7 267 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.8□□□□□ -1
COL6A5-202ENST00000312481 SIRPGQ9P1W8 387 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 FBXO5Q9UKT4 447 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 DIDO1Q9BTC0 2240 aaKnown RBP8.8□□□□□ -1
COL6A5-202ENST00000312481 FADS2P1A8MWK0 482 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 SNAP23O00161 211 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 SLC30A4O14863 429 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 PLSCR1O15162 318 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 BCAS2O75934 225 aaPredicted RBP8.8□□□□□ -1
COL6A5-202ENST00000312481 ATF6P18850 670 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 PRKCHP24723 683 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 ATP5C1P36542 298 aaKnown RBP8.8□□□□□ -1
COL6A5-202ENST00000312481 RPS9P46781 194 aaKnown RBP8.8□□□□□ -1
COL6A5-202ENST00000312481 FCGRTP55899 365 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 HERVK_113P63132 956 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 ERVK-8P63133 956 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 TRIM32Q13049 653 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 SZRD1Q7Z422 152 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 ECHDC2Q86YB7 292 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 UBR7Q8N806 425 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 FEM1CQ96JP0 617 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 ERVK-6Q9BXR3 956 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 GRHL1Q9NZI5 618 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 ANKRD65E5RJM6 399 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 E7ESA3 106 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 M0R2N6 131 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 IFNA7P01567 189 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 HSD3B1P14060 373 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 HSD3B2P26439 372 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 OVGP1Q12889 678 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 SKIV2LQ15477 1246 aaKnown RBP8.8□□□□□ -1
COL6A5-202ENST00000312481 RBM44Q6ZP01 1051 aaKnown RBP8.8□□□□□ -1
COL6A5-202ENST00000312481 RHEBL1Q8TAI7 183 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 OSBPL2Q9H1P3 480 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 FKBP14Q9NWM8 211 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 ZNF112Q9UJU3 913 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 G3BP2Q9UN86 482 aaKnown RBP8.8□□□□□ -1
COL6A5-202ENST00000312481 SCAF8Q9UPN6 1271 aaKnown RBP8.8□□□□□ -1
COL6A5-202ENST00000312481 ALDH4A1P30038 563 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 TAS2R43P59537 309 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 GPR33Q49SQ1 333 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 ARMC6Q6NXE6 501 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 MARCH10Q8NA82 808 aaPredicted RBP8.8□□□□□ -1
COL6A5-202ENST00000312481 IL31RAQ8NI17 732 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 SLC35B2Q8TB61 432 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 RHBDF1Q96CC6 855 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 NODALQ96S42 347 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 AGPSO00116 658 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 HS6ST1O60243 411 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 RHOQP17081 205 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 SUOXP51687 545 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 CRYBB1P53674 252 aaPredicted RBP8.8□□□□□ -1
COL6A5-202ENST00000312481 ZFP69Q49AA0 526 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 OR2T12Q8NG77 320 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 ATXN7L3BQ96GX2 97 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 ZNF696Q9H7X3 374 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 RPS6KB2Q9UBS0 482 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 F5P12259 2224 aa8.8□□□□□ -1
COL6A5-202ENST00000312481 ELOVL7A1L3X0 281 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 BCKDKO14874 412 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 CDH1P12830 882 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 CTPS1P17812 591 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 GRIK4Q16099 956 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 SPIN4Q56A73 249 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 POC5Q8NA72 575 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 SPPL2BQ8TCT7 592 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 PSKH2Q96QS6 385 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 MIOSQ9NXC5 875 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 TBC1D14Q9P2M4 693 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 DNAJB9Q9UBS3 223 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 COL5A3P25940 1745 aaPredicted RBP8.79□□□□□ -1
COL6A5-202ENST00000312481 H3BNH8 94 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 STX16-NPEPL1H3BU86 382 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 STX16O14662 325 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 DHX15O43143 795 aaKnown RBP8.79□□□□□ -1
COL6A5-202ENST00000312481 TGFB1I1O43294 461 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 TRIM3O75382 744 aaPredicted RBP8.79□□□□□ -1
COL6A5-202ENST00000312481 NDST3O95803 873 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 ADI1Q9BV57 179 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 FICDQ9BVA6 458 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 PDE10AQ9Y233 779 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 PGRMC2O15173 223 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 KIR3DL1P43629 444 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 CSHL1Q14406 222 aa8.79□□□□□ -1
COL6A5-202ENST00000312481 ZNHIT3Q15649 155 aaPredicted RBP8.79□□□□□ -1
COL6A5-202ENST00000312481 HKDC1Q2TB90 917 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms