RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 KIAA0907Q7Z7F0 614 aaPredicted RBP21.17■□□□□ 0.98
ATG4D-201ENST00000309469 TREML1Q86YW5 311 aa21.17■□□□□ 0.98
ATG4D-201ENST00000309469 CELF5Q8N6W0 485 aaKnown RBP21.17■□□□□ 0.98
ATG4D-201ENST00000309469 SLC2A11Q9BYW1 496 aa21.17■□□□□ 0.98
ATG4D-201ENST00000309469 SUV39H2Q9H5I1 410 aa21.17■□□□□ 0.98
ATG4D-201ENST00000309469 CLDN7O95471 211 aa21.16■□□□□ 0.98
ATG4D-201ENST00000309469 POP4O95707 220 aaKnown RBP21.16■□□□□ 0.98
ATG4D-201ENST00000309469 CCNHP51946 323 aaPredicted RBP21.16■□□□□ 0.98
ATG4D-201ENST00000309469 SHHQ15465 462 aa21.16■□□□□ 0.98
ATG4D-201ENST00000309469 TBCCQ15814 346 aa21.16■□□□□ 0.98
ATG4D-201ENST00000309469 SNCBQ16143 134 aa21.16■□□□□ 0.98
ATG4D-201ENST00000309469 NAT16Q8N8M0 369 aa21.16■□□□□ 0.98
ATG4D-201ENST00000309469 MAPK15Q8TD08 544 aa21.16■□□□□ 0.98
ATG4D-201ENST00000309469 ECHDC3Q96DC8 303 aa21.16■□□□□ 0.98
ATG4D-201ENST00000309469 LRRC3BQ96PB8 259 aa21.16■□□□□ 0.98
ATG4D-201ENST00000309469 TFB2MQ9H5Q4 396 aaKnown RBP21.16■□□□□ 0.98
ATG4D-201ENST00000309469 CERS4Q9HA82 394 aa21.16■□□□□ 0.98
ATG4D-201ENST00000309469 STK38LQ9Y2H1 464 aa21.16■□□□□ 0.98
ATG4D-201ENST00000309469 OAS3Q9Y6K5 1087 aaKnown RBP21.16■□□□□ 0.98
ATG4D-201ENST00000309469 SLCO1B7G3V0H7 640 aa21.16■□□□□ 0.98
ATG4D-201ENST00000309469 HDAC3O15379 428 aa21.16■□□□□ 0.98
ATG4D-201ENST00000309469 PYGLP06737 847 aa21.16■□□□□ 0.98
ATG4D-201ENST00000309469 CD9P21926 228 aa21.16■□□□□ 0.98
ATG4D-201ENST00000309469 ADARP55265 1226 aaKnown RBP21.16■□□□□ 0.98
ATG4D-201ENST00000309469 UBAP2LQ14157 1087 aaKnown RBP21.16■□□□□ 0.98
ATG4D-201ENST00000309469 SLC9B1Q4ZJI4 515 aa21.16■□□□□ 0.98
ATG4D-201ENST00000309469 CTSL3PQ5NE16 218 aa21.16■□□□□ 0.98
ATG4D-201ENST00000309469 CERS6Q6ZMG9 384 aa21.16■□□□□ 0.98
ATG4D-201ENST00000309469 DPY19L3Q6ZPD9 716 aa21.16■□□□□ 0.98
ATG4D-201ENST00000309469 UTP4Q969X6 686 aaKnown RBP21.16■□□□□ 0.98
ATG4D-201ENST00000309469 TBRG4Q969Z0 631 aaKnown RBP eCLIP21.16■□□□□ 0.98
ATG4D-201ENST00000309469 PHF21BQ96EK2 531 aa21.16■□□□□ 0.98
ATG4D-201ENST00000309469 LYSMD1Q96S90 227 aa21.16■□□□□ 0.98
ATG4D-201ENST00000309469 GPR21Q99679 349 aa21.16■□□□□ 0.98
ATG4D-201ENST00000309469 TBC1D10AQ9BXI6 508 aa21.16■□□□□ 0.98
ATG4D-201ENST00000309469 SHCBP1LQ9BZQ2 653 aa21.16■□□□□ 0.98
ATG4D-201ENST00000309469 VTI1BQ9UEU0 232 aa21.16■□□□□ 0.98
ATG4D-201ENST00000309469 YBX2Q9Y2T7 364 aaKnown RBP21.16■□□□□ 0.98
ATG4D-201ENST00000309469 COMMD10Q9Y6G5 202 aa21.16■□□□□ 0.98
ATG4D-201ENST00000309469 H3BMM5 538 aa21.15■□□□□ 0.98
ATG4D-201ENST00000309469 GPR39O43194 453 aa21.15■□□□□ 0.98
ATG4D-201ENST00000309469 GRID2O43424 1007 aa21.15■□□□□ 0.98
ATG4D-201ENST00000309469 VPS26AO75436 327 aa21.15■□□□□ 0.98
ATG4D-201ENST00000309469 RAD51Q06609 339 aa21.15■□□□□ 0.98
ATG4D-201ENST00000309469 SEL1L3Q68CR1 1132 aa21.15■□□□□ 0.98
ATG4D-201ENST00000309469 TMEM215Q68D42 235 aa21.15■□□□□ 0.98
ATG4D-201ENST00000309469 FAM151BQ6UXP7 276 aa21.15■□□□□ 0.98
ATG4D-201ENST00000309469 TMC5Q6UXY8 1006 aa21.15■□□□□ 0.98
ATG4D-201ENST00000309469 AHI1Q8N157 1196 aa21.15■□□□□ 0.98
ATG4D-201ENST00000309469 STK40Q8N2I9 435 aa21.15■□□□□ 0.98
ATG4D-201ENST00000309469 RHEBL1Q8TAI7 183 aa21.15■□□□□ 0.98
ATG4D-201ENST00000309469 DERL2Q9GZP9 239 aa21.15■□□□□ 0.98
ATG4D-201ENST00000309469 ZDHHC6Q9H6R6 413 aa21.15■□□□□ 0.98
ATG4D-201ENST00000309469 GALPQ9UBC7 116 aa21.15■□□□□ 0.98
ATG4D-201ENST00000309469 PPIL1Q9Y3C6 166 aa21.15■□□□□ 0.98
ATG4D-201ENST00000309469 PRR5-ARHGAP8B1AHC4 643 aa21.14■□□□□ 0.98
ATG4D-201ENST00000309469 GAPDHSO14556 408 aaPredicted RBP21.14■□□□□ 0.98
ATG4D-201ENST00000309469 TRIM24O15164 1050 aa21.14■□□□□ 0.98
ATG4D-201ENST00000309469 SMIM24O75264 130 aa21.14■□□□□ 0.98
ATG4D-201ENST00000309469 ESR1P03372 595 aa21.14■□□□□ 0.98
ATG4D-201ENST00000309469 ENO1P06733 434 aaKnown RBP21.14■□□□□ 0.98
ATG4D-201ENST00000309469 TPBGLP0DKB5 382 aa21.14■□□□□ 0.98
ATG4D-201ENST00000309469 POLR2EP19388 210 aaKnown RBP21.14■□□□□ 0.98
ATG4D-201ENST00000309469 IMPDH1P20839 514 aa21.14■□□□□ 0.98
ATG4D-201ENST00000309469 ARHGAP8P85298 464 aa21.14■□□□□ 0.98
ATG4D-201ENST00000309469 DHCR24Q15392 516 aa21.14■□□□□ 0.98
ATG4D-201ENST00000309469 OR4D1Q15615 310 aa21.14■□□□□ 0.98
ATG4D-201ENST00000309469 SCRN2Q96FV2 425 aa21.14■□□□□ 0.98
ATG4D-201ENST00000309469 ZNF641Q96N77 438 aaPredicted RBP21.14■□□□□ 0.98
ATG4D-201ENST00000309469 BTBD10Q9BSF8 475 aa21.14■□□□□ 0.98
ATG4D-201ENST00000309469 P2RY12Q9H244 342 aa21.14■□□□□ 0.98
ATG4D-201ENST00000309469 IL26Q9NPH9 171 aa21.14■□□□□ 0.98
ATG4D-201ENST00000309469 APPL1Q9UKG1 709 aa21.14■□□□□ 0.98
ATG4D-201ENST00000309469 ERVW-1Q9UQF0 538 aa21.14■□□□□ 0.98
ATG4D-201ENST00000309469 NPIPB15A6NHN6 443 aaPredicted RBP21.14■□□□□ 0.97
ATG4D-201ENST00000309469 A8MX80 341 aa21.14■□□□□ 0.97
ATG4D-201ENST00000309469 NIPSNAP2O75323 286 aa21.14■□□□□ 0.97
ATG4D-201ENST00000309469 PRAMEF1O95521 474 aa21.14■□□□□ 0.97
ATG4D-201ENST00000309469 ATP6V1G2O95670 118 aa21.14■□□□□ 0.97
ATG4D-201ENST00000309469 WEE1P30291 646 aa21.14■□□□□ 0.97
ATG4D-201ENST00000309469 ATP6V0D1P61421 351 aa21.14■□□□□ 0.97
ATG4D-201ENST00000309469 NFKB2Q00653 900 aa21.14■□□□□ 0.97
ATG4D-201ENST00000309469 RIPK1Q13546 671 aa21.14■□□□□ 0.97
ATG4D-201ENST00000309469 DUSP6Q16828 381 aa21.14■□□□□ 0.97
ATG4D-201ENST00000309469 CRTC1Q6UUV9 634 aa21.14■□□□□ 0.97
ATG4D-201ENST00000309469 Q6ZVU0 165 aa21.14■□□□□ 0.97
ATG4D-201ENST00000309469 NKAPQ8N5F7 415 aaKnown RBP21.14■□□□□ 0.97
ATG4D-201ENST00000309469 KDM1BQ8NB78 822 aa21.14■□□□□ 0.97
ATG4D-201ENST00000309469 GRIN3AQ8TCU5 1115 aa21.14■□□□□ 0.97
ATG4D-201ENST00000309469 DUS2Q9NX74 493 aaKnown RBP21.14■□□□□ 0.97
ATG4D-201ENST00000309469 TAGLN3Q9UI15 199 aa21.14■□□□□ 0.97
ATG4D-201ENST00000309469 HNRNPLP14866 589 aaKnown RBP eCLIP21.13■□□□□ 0.97
ATG4D-201ENST00000309469 BPIP17213 487 aa21.13■□□□□ 0.97
ATG4D-201ENST00000309469 AOC1P19801 751 aa21.13■□□□□ 0.97
ATG4D-201ENST00000309469 NRIP1P48552 1158 aa21.13■□□□□ 0.97
ATG4D-201ENST00000309469 GEN1Q17RS7 908 aa21.13■□□□□ 0.97
ATG4D-201ENST00000309469 METTL21CQ5VZV1 264 aa21.13■□□□□ 0.97
ATG4D-201ENST00000309469 TPRG1Q6ZUI0 275 aa21.13■□□□□ 0.97
ATG4D-201ENST00000309469 USP45Q70EL2 814 aa21.13■□□□□ 0.97
ATG4D-201ENST00000309469 SNX20Q7Z614 316 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms