RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 ARTNQ5T4W7 220 aa4.94□□□□□ -1.62
CAST-201ENST00000309190 TTC39BQ5VTQ0 682 aaPredicted RBP4.94□□□□□ -1.62
CAST-201ENST00000309190 SYDE1Q6ZW31 735 aaPredicted RBP4.94□□□□□ -1.62
CAST-201ENST00000309190 RASSF3Q86WH2 238 aa4.94□□□□□ -1.62
CAST-201ENST00000309190 TICAM1Q8IUC6 712 aa4.94□□□□□ -1.62
CAST-201ENST00000309190 ZDHHC17Q8IUH5 632 aa4.94□□□□□ -1.62
CAST-201ENST00000309190 ZCCHC9Q8N567 271 aaKnown RBP4.94□□□□□ -1.62
CAST-201ENST00000309190 DOK4Q8TEW6 326 aa4.94□□□□□ -1.62
CAST-201ENST00000309190 MTFMTQ96DP5 389 aaKnown RBP4.94□□□□□ -1.62
CAST-201ENST00000309190 ELMO2Q96JJ3 720 aa4.94□□□□□ -1.62
CAST-201ENST00000309190 SLC2A13Q96QE2 648 aa4.94□□□□□ -1.62
CAST-201ENST00000309190 SLX1AQ9BQ83 275 aa4.94□□□□□ -1.62
CAST-201ENST00000309190 BOCQ9BWV1 1114 aa4.94□□□□□ -1.62
CAST-201ENST00000309190 TRIM55Q9BYV6 548 aa4.94□□□□□ -1.62
CAST-201ENST00000309190 POLR1EQ9GZS1 481 aaKnown RBP4.94□□□□□ -1.62
CAST-201ENST00000309190 DENND2DQ9H6A0 471 aaPredicted RBP4.94□□□□□ -1.62
CAST-201ENST00000309190 RDH14Q9HBH5 336 aa4.94□□□□□ -1.62
CAST-201ENST00000309190 OLA1Q9NTK5 396 aaKnown RBP4.94□□□□□ -1.62
CAST-201ENST00000309190 FGFR1OP2Q9NVK5 253 aa4.94□□□□□ -1.62
CAST-201ENST00000309190 SPATA6Q9NWH7 488 aaPredicted RBP4.94□□□□□ -1.62
CAST-201ENST00000309190 CLIC5Q9NZA1 410 aa4.94□□□□□ -1.62
CAST-201ENST00000309190 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.94□□□□□ -1.621e-6■■■■■ 32.4
CAST-201ENST00000309190 SPO11Q9Y5K1 396 aa4.94□□□□□ -1.62
CAST-201ENST00000309190 SLC30A1Q9Y6M5 507 aa4.94□□□□□ -1.62
CAST-201ENST00000309190 NYNRINQ9P2P1 1898 aaKnown RBP4.93□□□□□ -1.62
CAST-201ENST00000309190 DIDO1Q9BTC0 2240 aaKnown RBP4.93□□□□□ -1.62
CAST-201ENST00000309190 PRAMEF33A0A0G2JMD5 474 aa4.93□□□□□ -1.62
CAST-201ENST00000309190 C9JVG2 144 aa4.93□□□□□ -1.62
CAST-201ENST00000309190 TMEM189-UBE2V1I3L0A0 370 aa4.93□□□□□ -1.62
CAST-201ENST00000309190 ZNF195O14628 629 aa4.93□□□□□ -1.62
CAST-201ENST00000309190 RASGRF2O14827 1237 aa4.93□□□□□ -1.62
CAST-201ENST00000309190 LILRB3O75022 631 aa4.93□□□□□ -1.62
CAST-201ENST00000309190 KATNA1O75449 491 aa4.93□□□□□ -1.62
CAST-201ENST00000309190 SLC25A14O95258 325 aaPredicted RBP4.93□□□□□ -1.62
CAST-201ENST00000309190 PRKCHP24723 683 aa4.93□□□□□ -1.62
CAST-201ENST00000309190 MAGEA11P43364 429 aa4.93□□□□□ -1.62
CAST-201ENST00000309190 GABRB2P47870 512 aa4.93□□□□□ -1.62
CAST-201ENST00000309190 CDH13P55290 713 aa4.93□□□□□ -1.62
CAST-201ENST00000309190 CLDN6P56747 220 aa4.93□□□□□ -1.62
CAST-201ENST00000309190 TRAF2Q12933 501 aa4.93□□□□□ -1.62
CAST-201ENST00000309190 ADAM15Q13444 863 aa4.93□□□□□ -1.62
CAST-201ENST00000309190 CSHL1Q14406 222 aa4.93□□□□□ -1.62
CAST-201ENST00000309190 USP10Q14694 798 aaKnown RBP4.93□□□□□ -1.62
CAST-201ENST00000309190 FASTKD1Q53R41 847 aaKnown RBP4.93□□□□□ -1.62
CAST-201ENST00000309190 RNASEH2BQ5TBB1 312 aaKnown RBP4.93□□□□□ -1.62
CAST-201ENST00000309190 STRA8Q7Z7C7 330 aa4.93□□□□□ -1.62
CAST-201ENST00000309190 HID1Q8IV36 788 aa4.93□□□□□ -1.62
CAST-201ENST00000309190 ARHGAP12Q8IWW6 846 aa4.93□□□□□ -1.62
CAST-201ENST00000309190 PELI3Q8N2H9 469 aa4.93□□□□□ -1.62
CAST-201ENST00000309190 GALNT15Q8N3T1 639 aa4.93□□□□□ -1.62
CAST-201ENST00000309190 PIP4K2CQ8TBX8 421 aa4.93□□□□□ -1.62
CAST-201ENST00000309190 DCAKDQ8WVC6 231 aa4.93□□□□□ -1.62
CAST-201ENST00000309190 TSACCQ96A04 125 aaPredicted RBP4.93□□□□□ -1.62
CAST-201ENST00000309190 NSMCE3Q96MG7 304 aa4.93□□□□□ -1.62
CAST-201ENST00000309190 LENG8Q96PV6 779 aaPredicted RBP4.93□□□□□ -1.62
CAST-201ENST00000309190 GLOD4Q9HC38 313 aa4.93□□□□□ -1.62
CAST-201ENST00000309190 TM7SF3Q9NS93 570 aa4.93□□□□□ -1.62
CAST-201ENST00000309190 EIF2B4Q9UI10 523 aaKnown RBP4.93□□□□□ -1.62
CAST-201ENST00000309190 KCNK6Q9Y257 313 aa4.93□□□□□ -1.62
CAST-201ENST00000309190 KLHL20Q9Y2M5 609 aa4.93□□□□□ -1.62
CAST-201ENST00000309190 GPSM3Q9Y4H4 160 aa4.93□□□□□ -1.62
CAST-201ENST00000309190 SLCO1B1Q9Y6L6 691 aa4.93□□□□□ -1.62
CAST-201ENST00000309190 A0A0A0MRY4 1105 aa4.93□□□□□ -1.62
CAST-201ENST00000309190 TRIM64A6NGJ6 449 aa4.93□□□□□ -1.62
CAST-201ENST00000309190 TRIM49D1C9J1S8 452 aa4.93□□□□□ -1.62
CAST-201ENST00000309190 NFATC1O95644 943 aa4.93□□□□□ -1.62
CAST-201ENST00000309190 APODP05090 189 aa4.93□□□□□ -1.62
CAST-201ENST00000309190 FAM163BP0C2L3 166 aa4.93□□□□□ -1.62
CAST-201ENST00000309190 RHOQP17081 205 aa4.93□□□□□ -1.62
CAST-201ENST00000309190 CTHP32929 405 aa4.93□□□□□ -1.62
CAST-201ENST00000309190 GRIA3P42263 894 aa4.93□□□□□ -1.62
CAST-201ENST00000309190 MAGEA6P43360 314 aa4.93□□□□□ -1.62
CAST-201ENST00000309190 NKX3-2P78367 333 aa4.93□□□□□ -1.62
CAST-201ENST00000309190 PDGFRLQ15198 375 aa4.93□□□□□ -1.62
CAST-201ENST00000309190 TRMT11Q7Z4G4 463 aaKnown RBP4.93□□□□□ -1.62
CAST-201ENST00000309190 APLFQ8IW19 511 aaPredicted RBP4.93□□□□□ -1.62
CAST-201ENST00000309190 KIRREL3Q8IZU9 778 aa4.93□□□□□ -1.62
CAST-201ENST00000309190 NIPA2Q8N8Q9 360 aa4.93□□□□□ -1.62
CAST-201ENST00000309190 GBP7Q8N8V2 638 aaPredicted RBP4.93□□□□□ -1.62
CAST-201ENST00000309190 GRK7Q8WTQ7 553 aa4.93□□□□□ -1.62
CAST-201ENST00000309190 PIGKQ92643 395 aa4.93□□□□□ -1.62
CAST-201ENST00000309190 SPATA13Q96N96 652 aa4.93□□□□□ -1.62
CAST-201ENST00000309190 MLPHQ9BV36 600 aaPredicted RBP4.93□□□□□ -1.62
CAST-201ENST00000309190 CADM1Q9BY67 442 aaKnown RBP4.93□□□□□ -1.62
CAST-201ENST00000309190 EPB41L1Q9H4G0 881 aa4.93□□□□□ -1.62
CAST-201ENST00000309190 USP29Q9HBJ7 922 aa4.93□□□□□ -1.62
CAST-201ENST00000309190 HPS4Q9NQG7 708 aa4.93□□□□□ -1.62
CAST-201ENST00000309190 DPP7Q9UHL4 492 aa4.93□□□□□ -1.62
CAST-201ENST00000309190 PLAGL1Q9UM63 463 aa4.93□□□□□ -1.62
CAST-201ENST00000309190 DOLKQ9UPQ8 538 aa4.93□□□□□ -1.62
CAST-201ENST00000309190 ARL2BPQ9Y2Y0 163 aa4.93□□□□□ -1.62
CAST-201ENST00000309190 RWDD3Q9Y3V2 267 aa4.93□□□□□ -1.62
CAST-201ENST00000309190 CACNA1CQ13936 2221 aa4.93□□□□□ -1.62
CAST-201ENST00000309190 ZNF318Q5VUA4 2279 aa4.93□□□□□ -1.62
CAST-201ENST00000309190 TMEM265A0A087WTH1 108 aa4.93□□□□□ -1.62
CAST-201ENST00000309190 CFAP69A5D8W1 941 aa4.93□□□□□ -1.62
CAST-201ENST00000309190 SPECC1L-ADORA2AF8WAN1 911 aa4.93□□□□□ -1.62
CAST-201ENST00000309190 ICMTO60725 284 aa4.93□□□□□ -1.62
CAST-201ENST00000309190 NDUFS3O75489 264 aa4.93□□□□□ -1.62
CAST-201ENST00000309190 ELFN1P0C7U0 828 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms