RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 PAPPAQ13219 1627 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 STX16O14662 325 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 VEGFDO43915 354 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 GSTT2P0CG29 244 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 CAMK2DQ13557 499 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 STARD3Q14849 445 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 PTGR1Q14914 329 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 PROX2Q3B8N5 592 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 PGAP1Q75T13 922 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 HEATR4Q86WZ0 1026 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 TAS1R2Q8TE23 839 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 ACSBG1Q96GR2 724 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 LRFN5Q96NI6 719 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 SLC6A7Q99884 636 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 TMEM117Q9H0C3 514 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 KLHL25Q9H0H3 589 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 SLC25A51Q9H1U9 297 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 RNF24Q9Y225 148 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 TMEM5Q9Y2B1 443 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 GNG14A0A1W2PPG7 69 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 AKAP3O75969 853 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 ABL1P00519 1130 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 VARSP26640 1264 aaKnown RBP4.01□□□□□ -1.77
USH2A-201ENST00000307340 GRK5P34947 590 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 BUD31P41223 144 aaPredicted RBP4.01□□□□□ -1.77
USH2A-201ENST00000307340 IL1RL1Q01638 556 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 SPOCD1Q6ZMY3 1216 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 CHST9Q7L1S5 443 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 TMC7Q7Z402 723 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 B3GALNT2Q8NCR0 500 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 ZNF669Q96BR6 464 aaPredicted RBP4.01□□□□□ -1.77
USH2A-201ENST00000307340 SLC7A5P2Q9GIP4 190 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 SPATC1LQ9H0A9 340 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 OR12D3Q9UGF7 316 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 TCP10L2B9ZVM9 353 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 PSEN2P49810 448 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 NDST1P52848 882 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 KCNA1Q09470 495 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 RAB7BQ96AH8 199 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 MBOAT7Q96N66 472 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 CLCC1Q96S66 551 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 MIPEPQ99797 713 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 MMP27Q9H306 513 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 TRIM38O00635 465 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 TOR1BO14657 336 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 FSCN2O14926 492 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 ARL4DP49703 201 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 DPYSL2Q16555 572 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 TBCELQ5QJ74 424 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 SLC25A25Q6KCM7 469 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 QSOX2Q6ZRP7 698 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 TAS2R42Q7RTR8 314 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 C11orf74Q86VG3 221 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 FAM71DQ8N9W8 422 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 ISOC1Q96CN7 298 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 TBL1YQ9BQ87 522 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 CCM2Q9BSQ5 444 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 SPON1Q9HCB6 807 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 B3GNT3Q9Y2A9 372 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 A0A1B0GVC2 190 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 FAM155AB1AL88 458 aaPredicted RBP4.01□□□□□ -1.77
USH2A-201ENST00000307340 AIM2O14862 343 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 ATP9BO43861 1147 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 SLITRK3O94933 977 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 CTDNEP1O95476 244 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 PDHA1P08559 390 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 CHRM3P20309 590 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 ADARP55265 1226 aaKnown RBP4.01□□□□□ -1.77
USH2A-201ENST00000307340 TRAF2Q12933 501 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 OIT3Q8WWZ8 545 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 PHYHIPQ92561 330 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 PNMA5Q96PV4 448 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 MNTQ99583 582 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 BBS2Q9BXC9 721 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 ALG2Q9H553 416 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 GDAP2Q9NXN4 497 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 FADS3Q9Y5Q0 445 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 CACNB4O00305 520 aaPredicted RBP4.01□□□□□ -1.77
USH2A-201ENST00000307340 NBNO60934 754 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 ERVK-10P10266 1014 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 FGFR3P22607 806 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 PBX1P40424 430 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 FBXW4P57775 412 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 ZNF311Q5JNZ3 666 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 RAET1EQ8TD07 263 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 SLC45A3Q96JT2 553 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 RNF157Q96PX1 679 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 TMPRSS11EQ9UL52 423 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 NHSQ6T4R5 1651 aa4□□□□□ -1.77
USH2A-201ENST00000307340 BTAF1O14981 1849 aa4□□□□□ -1.77
USH2A-201ENST00000307340 TRIM64A6NGJ6 449 aa4□□□□□ -1.77
USH2A-201ENST00000307340 GABRDO14764 452 aa4□□□□□ -1.77
USH2A-201ENST00000307340 SLC30A4O14863 429 aa4□□□□□ -1.77
USH2A-201ENST00000307340 SUV39H1O43463 412 aa4□□□□□ -1.77
USH2A-201ENST00000307340 NOS1APO75052 506 aaPredicted RBP4□□□□□ -1.77
USH2A-201ENST00000307340 B3GALNT1O75752 331 aa4□□□□□ -1.77
USH2A-201ENST00000307340 CLDN9O95484 217 aa4□□□□□ -1.77
USH2A-201ENST00000307340 FDPSP14324 419 aaKnown RBP4□□□□□ -1.77
USH2A-201ENST00000307340 BCL2L1Q07817 233 aa4□□□□□ -1.77
USH2A-201ENST00000307340 TMEM63BQ5T3F8 832 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms