RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 C19orf48Q6RUI8 117 aa5.44□□□□□ -1.54
VPS50-202ENST00000305866 ZNF598Q86UK7 904 aaKnown RBP5.44□□□□□ -1.54
VPS50-202ENST00000305866 FAM35AQ86V20 835 aa5.44□□□□□ -1.54
VPS50-202ENST00000305866 CHDHQ8NE62 594 aaPredicted RBP5.44□□□□□ -1.54
VPS50-202ENST00000305866 NPLOC4Q8TAT6 608 aa5.44□□□□□ -1.54
VPS50-202ENST00000305866 DYNC2LI1Q8TCX1 351 aa5.44□□□□□ -1.54
VPS50-202ENST00000305866 TBC1D20Q96BZ9 403 aa5.44□□□□□ -1.54
VPS50-202ENST00000305866 RMND5BQ96G75 393 aaPredicted RBP5.44□□□□□ -1.54
VPS50-202ENST00000305866 TCF12Q99081 682 aa5.44□□□□□ -1.54
VPS50-202ENST00000305866 HEPHQ9BQS7 1158 aa5.44□□□□□ -1.54
VPS50-202ENST00000305866 TRMOQ9BU70 441 aa5.44□□□□□ -1.54
VPS50-202ENST00000305866 KATNAL1Q9BW62 490 aa5.44□□□□□ -1.54
VPS50-202ENST00000305866 COLEC11Q9BWP8 271 aa5.44□□□□□ -1.54
VPS50-202ENST00000305866 RHOBTB2Q9BYZ6 727 aa5.44□□□□□ -1.54
VPS50-202ENST00000305866 PRKD2Q9BZL6 878 aa5.44□□□□□ -1.54
VPS50-202ENST00000305866 SLIRPQ9GZT3 109 aaKnown RBP5.44□□□□□ -1.54
VPS50-202ENST00000305866 NXF3Q9H4D5 531 aaKnown RBP5.44□□□□□ -1.54
VPS50-202ENST00000305866 SPAG4Q9NPE6 437 aa5.44□□□□□ -1.54
VPS50-202ENST00000305866 TBC1D13Q9NVG8 400 aa5.44□□□□□ -1.54
VPS50-202ENST00000305866 FKBP14Q9NWM8 211 aa5.44□□□□□ -1.54
VPS50-202ENST00000305866 USE1Q9NZ43 259 aa5.44□□□□□ -1.54
VPS50-202ENST00000305866 AAR2Q9Y312 384 aaKnown RBP5.44□□□□□ -1.54
VPS50-202ENST00000305866 ASB1Q9Y576 335 aa5.44□□□□□ -1.54
VPS50-202ENST00000305866 COL4A3Q01955 1670 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.43□□□□□ -1.54
VPS50-202ENST00000305866 ARHGEF37A1IGU5 675 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 ARPC2O15144 300 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 CDK14O94921 469 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 GABARAPO95166 117 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 NDST3O95803 873 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 KRT19P08727 400 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 ATXN1LP0C7T5 689 aaKnown RBP5.43□□□□□ -1.54
VPS50-202ENST00000305866 ZNF182P17025 639 aaPredicted RBP5.43□□□□□ -1.54
VPS50-202ENST00000305866 IMPDH1P20839 514 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 FDXRP22570 491 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 ELK4P28324 431 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 TYK2P29597 1187 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 SERPINB6P35237 376 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 OPRL1P41146 370 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 ADCYAP1R1P41586 468 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 SCNN1GP51170 649 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 CRYBA2P53672 197 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 SESN2P58004 480 aaPredicted RBP5.43□□□□□ -1.54
VPS50-202ENST00000305866 COG7P83436 770 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 SP4Q02446 784 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 FOXM1Q08050 763 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 CDH17Q12864 832 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 BNIP3Q12983 259 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 SELPLGQ14242 412 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 MFSD10Q14728 455 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 ZRSR2Q15696 482 aaKnown RBP5.43□□□□□ -1.54
VPS50-202ENST00000305866 PHKG1Q16816 387 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 TRIM71Q2Q1W2 868 aaKnown RBP5.43□□□□□ -1.54
VPS50-202ENST00000305866 PRAMEF18Q5VWM3 479 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 TAF2Q6P1X5 1199 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 ZNF773Q6PK81 442 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 CTU1Q7Z7A3 348 aaKnown RBP5.43□□□□□ -1.54
VPS50-202ENST00000305866 ANKRD13BQ86YJ7 626 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 SLC22A15Q8IZD6 547 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 SPATA6LQ8N4H0 392 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 DPP10Q8N608 796 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 TRPV3Q8NET8 790 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 NLGN2Q8NFZ4 835 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 GIPC3Q8TF64 312 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 FAR1Q8WVX9 515 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 BRI3BPQ8WY22 251 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 BORCS5Q969J3 196 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 CCDC115Q96NT0 180 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 CTRCQ99895 268 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 TMEM79Q9BSE2 394 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 TRIM8Q9BZR9 551 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 ATP13A3Q9H7F0 1226 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 SP110Q9HB58 689 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 TRPV5Q9NQA5 729 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 ENPP5Q9UJA9 477 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 DSEQ9UL01 958 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 OAZ3Q9UMX2 235 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 SNX10Q9Y5X0 201 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 PABPN1LA6NDY0 278 aaKnown RBP5.43□□□□□ -1.54
VPS50-202ENST00000305866 F5H423 210 aaPredicted RBP5.43□□□□□ -1.54
VPS50-202ENST00000305866 EEDO75530 441 aaKnown RBP5.43□□□□□ -1.54
VPS50-202ENST00000305866 DDHD2O94830 711 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 S1PR4O95977 384 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 EPOP01588 193 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 C1SP09871 688 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 ZNF286BP0CG31 522 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 LCP1P13796 627 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 CD1DP15813 335 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 ERCC2P18074 760 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 NFKB1P19838 968 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 FSHRP23945 695 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 MASP1P48740 699 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 PSEN2P49810 448 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 SULT1E1P49888 294 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 FAM189BP81408 668 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 PURAQ00577 322 aaKnown RBP5.43□□□□□ -1.54
VPS50-202ENST00000305866 SLC12A1Q13621 1099 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 MRPL58Q14197 206 aaKnown RBP5.43□□□□□ -1.54
VPS50-202ENST00000305866 MAP7Q14244 749 aa5.43□□□□□ -1.54
VPS50-202ENST00000305866 UGP2Q16851 508 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms