RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 MED26O95402 600 aa16.31■□□□□ 0.2
BRD3-201ENST00000303407 TSPAN19P0C672 248 aa16.31■□□□□ 0.2
BRD3-201ENST00000303407 RPL3P39023 403 aaKnown RBP16.31■□□□□ 0.2
BRD3-201ENST00000303407 SLC1A2P43004 574 aa16.31■□□□□ 0.2
BRD3-201ENST00000303407 GSTM5P46439 218 aa16.31■□□□□ 0.2
BRD3-201ENST00000303407 VPS26BQ4G0F5 336 aa16.31■□□□□ 0.2
BRD3-201ENST00000303407 DPP10Q8N608 796 aa16.31■□□□□ 0.2
BRD3-201ENST00000303407 OSBPL6Q9BZF3 934 aa16.31■□□□□ 0.2
BRD3-201ENST00000303407 FBXO10Q9UK96 956 aa16.31■□□□□ 0.2
BRD3-201ENST00000303407 EFCAB10A6NFE3 127 aa16.3■□□□□ 0.2
BRD3-201ENST00000303407 INSIG1O15503 277 aa16.3■□□□□ 0.2
BRD3-201ENST00000303407 TTKP33981 857 aa16.3■□□□□ 0.2
BRD3-201ENST00000303407 CLCQ05315 142 aa16.3■□□□□ 0.2
BRD3-201ENST00000303407 EIF2B5Q13144 721 aaKnown RBP16.3■□□□□ 0.2
BRD3-201ENST00000303407 TIGD5Q53EQ6 642 aa16.3■□□□□ 0.2
BRD3-201ENST00000303407 ZDHHC20Q5W0Z9 365 aa16.3■□□□□ 0.2
BRD3-201ENST00000303407 SCAMP5Q8TAC9 235 aa16.3■□□□□ 0.2
BRD3-201ENST00000303407 BORCS6Q96GS4 357 aa16.3■□□□□ 0.2
BRD3-201ENST00000303407 DNAJC1Q96KC8 554 aaKnown RBP16.3■□□□□ 0.2
BRD3-201ENST00000303407 CLK4Q9HAZ1 481 aaKnown RBP16.3■□□□□ 0.2
BRD3-201ENST00000303407 KCTD5Q9NXV2 234 aa16.3■□□□□ 0.2
BRD3-201ENST00000303407 NUDT4Q9NZJ9 180 aa16.3■□□□□ 0.2
BRD3-201ENST00000303407 CNTN3Q9P232 1028 aa16.3■□□□□ 0.2
BRD3-201ENST00000303407 IKZF3Q9UKT9 509 aa16.3■□□□□ 0.2
BRD3-201ENST00000303407 G3V2T6 193 aa16.3■□□□□ 0.2
BRD3-201ENST00000303407 ZNF37AP17032 561 aaPredicted RBP16.3■□□□□ 0.2
BRD3-201ENST00000303407 ITPKAP23677 461 aa16.3■□□□□ 0.2
BRD3-201ENST00000303407 ADARP55265 1226 aaKnown RBP16.3■□□□□ 0.2
BRD3-201ENST00000303407 WDR4P57081 412 aaKnown RBP16.3■□□□□ 0.2
BRD3-201ENST00000303407 IL10RBQ08334 325 aa16.3■□□□□ 0.2
BRD3-201ENST00000303407 KCNJ11Q14654 390 aa16.3■□□□□ 0.2
BRD3-201ENST00000303407 DEFB118Q96PH6 123 aa16.3■□□□□ 0.2
BRD3-201ENST00000303407 LENG8Q96PV6 779 aaPredicted RBP16.3■□□□□ 0.2
BRD3-201ENST00000303407 RHBGQ9H310 441 aa16.3■□□□□ 0.2
BRD3-201ENST00000303407 STMN3Q9NZ72 180 aa16.3■□□□□ 0.2
BRD3-201ENST00000303407 PBX3P40426 434 aa16.3■□□□□ 0.2
BRD3-201ENST00000303407 KIAA0408Q6ZU52 694 aa16.3■□□□□ 0.2
BRD3-201ENST00000303407 VN1R5Q7Z5H4 357 aa16.3■□□□□ 0.2
BRD3-201ENST00000303407 FSTL5Q8N475 847 aaPredicted RBP16.3■□□□□ 0.2
BRD3-201ENST00000303407 CNTD1Q8N815 330 aa16.3■□□□□ 0.2
BRD3-201ENST00000303407 ADCY4Q8NFM4 1077 aa16.3■□□□□ 0.2
BRD3-201ENST00000303407 ATP6V1HQ9UI12 483 aa16.3■□□□□ 0.2
BRD3-201ENST00000303407 TALDO1P37837 337 aa16.3■□□□□ 0.2
BRD3-201ENST00000303407 SPAM1P38567 509 aa16.3■□□□□ 0.2
BRD3-201ENST00000303407 CXCR3P49682 368 aa16.3■□□□□ 0.2
BRD3-201ENST00000303407 FSTL1Q12841 308 aa16.3■□□□□ 0.2
BRD3-201ENST00000303407 FBXO48Q5FWF7 155 aa16.3■□□□□ 0.2
BRD3-201ENST00000303407 ARMC4Q5T2S8 1044 aa16.3■□□□□ 0.2
BRD3-201ENST00000303407 ANXA8L1Q5VT79 327 aa16.3■□□□□ 0.2
BRD3-201ENST00000303407 ARHGAP22Q7Z5H3 698 aa16.3■□□□□ 0.2
BRD3-201ENST00000303407 OR2T34Q8NGX1 318 aa16.3■□□□□ 0.2
BRD3-201ENST00000303407 OR2T3Q8NH03 318 aa16.3■□□□□ 0.2
BRD3-201ENST00000303407 GATA5Q9BWX5 397 aaPredicted RBP16.3■□□□□ 0.2
BRD3-201ENST00000303407 REXO4Q9GZR2 422 aaKnown RBP16.3■□□□□ 0.2
BRD3-201ENST00000303407 POLR1BQ9H9Y6 1135 aa16.3■□□□□ 0.2
BRD3-201ENST00000303407 TRMT13Q9NUP7 481 aaKnown RBP16.3■□□□□ 0.2
BRD3-201ENST00000303407 ARIH1Q9Y4X5 557 aaPredicted RBP16.3■□□□□ 0.2
BRD3-201ENST00000303407 COPG1Q9Y678 874 aaKnown RBP16.3■□□□□ 0.2
BRD3-201ENST00000303407 VAV1P15498 845 aa16.3■□□□□ 0.2
BRD3-201ENST00000303407 PAICSP22234 425 aaKnown RBP16.3■□□□□ 0.2
BRD3-201ENST00000303407 SULT2A1Q06520 285 aa16.3■□□□□ 0.2
BRD3-201ENST00000303407 DDX1Q92499 740 aaKnown RBP16.3■□□□□ 0.2
BRD3-201ENST00000303407 MAGEH1Q9H213 219 aa16.3■□□□□ 0.2
BRD3-201ENST00000303407 A0A088AWK7 358 aa16.29■□□□□ 0.2
BRD3-201ENST00000303407 CAPN8A6NHC0 703 aa16.29■□□□□ 0.2
BRD3-201ENST00000303407 MGRN1O60291 552 aa16.29■□□□□ 0.2
BRD3-201ENST00000303407 ITGA2P17301 1181 aa16.29■□□□□ 0.2
BRD3-201ENST00000303407 ZNF10P21506 573 aaPredicted RBP16.29■□□□□ 0.2
BRD3-201ENST00000303407 NRG1Q02297 640 aaPredicted RBP16.29■□□□□ 0.2
BRD3-201ENST00000303407 CCL14Q16627 93 aa16.29■□□□□ 0.2
BRD3-201ENST00000303407 RALGPS1Q5JS13 557 aa16.29■□□□□ 0.2
BRD3-201ENST00000303407 FAM182AQ5T1J6 154 aa16.29■□□□□ 0.2
BRD3-201ENST00000303407 PAGE2Q7Z2X7 111 aa16.29■□□□□ 0.2
BRD3-201ENST00000303407 RASAL3Q86YV0 1011 aa16.29■□□□□ 0.2
BRD3-201ENST00000303407 SIDT2Q8NBJ9 832 aaKnown RBP16.29■□□□□ 0.2
BRD3-201ENST00000303407 ZNF540Q8NDQ6 660 aa16.29■□□□□ 0.2
BRD3-201ENST00000303407 UPF1Q92900 1129 aaKnown RBP eCLIP16.29■□□□□ 0.27e-7■■■■■ 36.1
BRD3-201ENST00000303407 FAIM2Q9BWQ8 316 aa16.29■□□□□ 0.2
BRD3-201ENST00000303407 RSL24D1Q9UHA3 163 aaKnown RBP16.29■□□□□ 0.2
BRD3-201ENST00000303407 ADGRE2Q9UHX3 823 aa16.29■□□□□ 0.2
BRD3-201ENST00000303407 SMIM31A0A1B0GVY4 71 aa16.29■□□□□ 0.2
BRD3-201ENST00000303407 SLC38A8A6NNN8 435 aa16.29■□□□□ 0.2
BRD3-201ENST00000303407 CCL16O15467 120 aa16.29■□□□□ 0.2
BRD3-201ENST00000303407 NPHS1O60500 1241 aa16.29■□□□□ 0.2
BRD3-201ENST00000303407 GLUD1P00367 558 aa16.29■□□□□ 0.2
BRD3-201ENST00000303407 ALOX12P18054 663 aa16.29■□□□□ 0.2
BRD3-201ENST00000303407 LAG3P18627 525 aa16.29■□□□□ 0.2
BRD3-201ENST00000303407 GRIA1P42261 906 aa16.29■□□□□ 0.2
BRD3-201ENST00000303407 SPIBQ01892 262 aa16.29■□□□□ 0.2
BRD3-201ENST00000303407 TCEA2Q15560 299 aa16.29■□□□□ 0.2
BRD3-201ENST00000303407 PLPP4Q5VZY2 271 aa16.29■□□□□ 0.2
BRD3-201ENST00000303407 CHMP1BQ7LBR1 199 aa16.29■□□□□ 0.2
BRD3-201ENST00000303407 TMEM110Q86TL2 294 aa16.29■□□□□ 0.2
BRD3-201ENST00000303407 OR2T12Q8NG77 320 aa16.29■□□□□ 0.2
BRD3-201ENST00000303407 TNKS2Q9H2K2 1166 aa16.29■□□□□ 0.2
BRD3-201ENST00000303407 COMMD3-BMI1R4GMX3 469 aa16.29■□□□□ 0.2
BRD3-201ENST00000303407 CXorf49A8MYA2 514 aaPredicted RBP16.29■□□□□ 0.2
BRD3-201ENST00000303407 PDZK1Q5T2W1 519 aa16.29■□□□□ 0.2
BRD3-201ENST00000303407 CRTC3Q6UUV7 619 aa16.29■□□□□ 0.2
BRD3-201ENST00000303407 HDHD2Q9H0R4 259 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms