RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 GOLGA8KD6RF30 607 aa9.44□□□□□ -0.9
RFX3-201ENST00000302303 GOLGA8TH3BQL2 631 aa9.44□□□□□ -0.9
RFX3-201ENST00000302303 SLC31A1O15431 190 aa9.44□□□□□ -0.9
RFX3-201ENST00000302303 RIPK2O43353 540 aa9.44□□□□□ -0.9
RFX3-201ENST00000302303 SRP72O76094 671 aaKnown RBP9.44□□□□□ -0.9
RFX3-201ENST00000302303 VAPBO95292 243 aa9.44□□□□□ -0.9
RFX3-201ENST00000302303 GOT2P00505 430 aaKnown RBP9.44□□□□□ -0.9
RFX3-201ENST00000302303 POLBP06746 335 aa9.44□□□□□ -0.9
RFX3-201ENST00000302303 TUBBP07437 444 aa9.44□□□□□ -0.9
RFX3-201ENST00000302303 F7P08709 466 aaPredicted RBP9.44□□□□□ -0.9
RFX3-201ENST00000302303 H2AFXP16104 143 aaPredicted RBP9.44□□□□□ -0.9
RFX3-201ENST00000302303 GABRB3P28472 473 aa9.44□□□□□ -0.9
RFX3-201ENST00000302303 IGFALSP35858 605 aa9.44□□□□□ -0.9
RFX3-201ENST00000302303 PTGER3P43115 390 aa9.44□□□□□ -0.9
RFX3-201ENST00000302303 PMS2P54278 862 aa9.44□□□□□ -0.9
RFX3-201ENST00000302303 PTPN5P54829 565 aa9.44□□□□□ -0.9
RFX3-201ENST00000302303 PDE1BQ01064 536 aa9.44□□□□□ -0.9
RFX3-201ENST00000302303 SMAD1Q15797 465 aaKnown RBP9.44□□□□□ -0.9
RFX3-201ENST00000302303 ATP13A5Q4VNC0 1218 aa9.44□□□□□ -0.9
RFX3-201ENST00000302303 KHDC1Q4VXA5 237 aaKnown RBP9.44□□□□□ -0.9
RFX3-201ENST00000302303 SPANXN3Q5MJ09 141 aa9.44□□□□□ -0.9
RFX3-201ENST00000302303 BEND6Q5SZJ8 279 aaPredicted RBP9.44□□□□□ -0.9
RFX3-201ENST00000302303 TPRG1LQ5T0D9 272 aa9.44□□□□□ -0.9
RFX3-201ENST00000302303 TEDDM1Q5T9Z0 273 aa9.44□□□□□ -0.9
RFX3-201ENST00000302303 PSAPL1Q6NUJ1 521 aa9.44□□□□□ -0.9
RFX3-201ENST00000302303 CASC4Q6P4E1 433 aa9.44□□□□□ -0.9
RFX3-201ENST00000302303 CCNJLQ8IV13 435 aa9.44□□□□□ -0.9
RFX3-201ENST00000302303 TMEFF1Q8IYR6 380 aa9.44□□□□□ -0.9
RFX3-201ENST00000302303 GAB3Q8WWW8 586 aa9.44□□□□□ -0.9
RFX3-201ENST00000302303 DNASE2BQ8WZ79 361 aa9.44□□□□□ -0.9
RFX3-201ENST00000302303 CFAP36Q96G28 342 aa9.44□□□□□ -0.9
RFX3-201ENST00000302303 MCMBPQ9BTE3 642 aa9.44□□□□□ -0.9
RFX3-201ENST00000302303 FAM126AQ9BYI3 521 aaPredicted RBP9.44□□□□□ -0.9
RFX3-201ENST00000302303 TSPYL1Q9H0U9 437 aa9.44□□□□□ -0.9
RFX3-201ENST00000302303 PCED1AQ9H1Q7 454 aa9.44□□□□□ -0.9
RFX3-201ENST00000302303 FAM83DQ9H4H8 585 aa9.44□□□□□ -0.9
RFX3-201ENST00000302303 FAM96AQ9H5X1 160 aa9.44□□□□□ -0.9
RFX3-201ENST00000302303 SLC17A6Q9P2U8 582 aa9.44□□□□□ -0.9
RFX3-201ENST00000302303 RABGEF1Q9UJ41 708 aa9.44□□□□□ -0.9
RFX3-201ENST00000302303 CA5BQ9Y2D0 317 aa9.44□□□□□ -0.9
RFX3-201ENST00000302303 PKP3Q9Y446 797 aa9.44□□□□□ -0.9
RFX3-201ENST00000302303 DNAH14Q0VDD8 3507 aa9.44□□□□□ -0.9
RFX3-201ENST00000302303 A0A1W2PPC4 97 aa9.43□□□□□ -0.9
RFX3-201ENST00000302303 CCDC151A5D8V7 595 aa9.43□□□□□ -0.9
RFX3-201ENST00000302303 H0Y8X5 98 aa9.43□□□□□ -0.9
RFX3-201ENST00000302303 SGTAO43765 313 aa9.43□□□□□ -0.9
RFX3-201ENST00000302303 LZTS3O60299 673 aaPredicted RBP9.43□□□□□ -0.9
RFX3-201ENST00000302303 FUCA1P04066 466 aa9.43□□□□□ -0.9
RFX3-201ENST00000302303 ERVK-10P10266 1014 aa9.43□□□□□ -0.9
RFX3-201ENST00000302303 TSHRP16473 764 aa9.43□□□□□ -0.9
RFX3-201ENST00000302303 NFKBIAP25963 317 aa9.43□□□□□ -0.9
RFX3-201ENST00000302303 MAOBP27338 520 aa9.43□□□□□ -0.9
RFX3-201ENST00000302303 MC4RP32245 332 aa9.43□□□□□ -0.9
RFX3-201ENST00000302303 SPAM1P38567 509 aa9.43□□□□□ -0.9
RFX3-201ENST00000302303 HADHAP40939 763 aa9.43□□□□□ -0.9
RFX3-201ENST00000302303 CLDN2P57739 230 aa9.43□□□□□ -0.9
RFX3-201ENST00000302303 B4GALNT1Q00973 533 aa9.43□□□□□ -0.9
RFX3-201ENST00000302303 TCF15Q12870 199 aa9.43□□□□□ -0.9
RFX3-201ENST00000302303 LAMB3Q13751 1172 aa9.43□□□□□ -0.9
RFX3-201ENST00000302303 SLC29A2Q14542 456 aa9.43□□□□□ -0.9
RFX3-201ENST00000302303 SLMAPQ14BN4 828 aa9.43□□□□□ -0.9
RFX3-201ENST00000302303 IRF4Q15306 451 aa9.43□□□□□ -0.9
RFX3-201ENST00000302303 PLK5Q496M5 336 aa9.43□□□□□ -0.9
RFX3-201ENST00000302303 ZNF789Q5FWF6 425 aa9.43□□□□□ -0.9
RFX3-201ENST00000302303 ALS2CLQ60I27 953 aa9.43□□□□□ -0.9
RFX3-201ENST00000302303 KCTD16Q68DU8 428 aa9.43□□□□□ -0.9
RFX3-201ENST00000302303 PNCKQ6P2M8 343 aa9.43□□□□□ -0.9
RFX3-201ENST00000302303 EMBQ6PCB8 327 aa9.43□□□□□ -0.9
RFX3-201ENST00000302303 FAM151BQ6UXP7 276 aa9.43□□□□□ -0.9
RFX3-201ENST00000302303 GCNT7Q6ZNI0 430 aa9.43□□□□□ -0.9
RFX3-201ENST00000302303 CAPN12Q6ZSI9 719 aa9.43□□□□□ -0.9
RFX3-201ENST00000302303 PTAR1Q7Z6K3 402 aaPredicted RBP9.43□□□□□ -0.9
RFX3-201ENST00000302303 LDB1Q86U70 411 aaPredicted RBP9.43□□□□□ -0.9
RFX3-201ENST00000302303 CNTN4Q8IWV2 1026 aa9.43□□□□□ -0.9
RFX3-201ENST00000302303 MREGQ8N565 214 aa9.43□□□□□ -0.9
RFX3-201ENST00000302303 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.43□□□□□ -0.9
RFX3-201ENST00000302303 GPR150Q8NGU9 434 aa9.43□□□□□ -0.9
RFX3-201ENST00000302303 GSDMBQ8TAX9 411 aa9.43□□□□□ -0.9
RFX3-201ENST00000302303 ZNF398Q8TD17 642 aa9.43□□□□□ -0.9
RFX3-201ENST00000302303 HNRNPLLQ8WVV9 542 aaKnown RBP9.43□□□□□ -0.9
RFX3-201ENST00000302303 AP2M1Q96CW1 435 aa9.43□□□□□ -0.9
RFX3-201ENST00000302303 NUS1Q96E22 293 aa9.43□□□□□ -0.9
RFX3-201ENST00000302303 CERS2Q96G23 380 aa9.43□□□□□ -0.9
RFX3-201ENST00000302303 COX14Q96I36 57 aa9.43□□□□□ -0.9
RFX3-201ENST00000302303 ZC3H10Q96K80 434 aaKnown RBP9.43□□□□□ -0.9
RFX3-201ENST00000302303 LGR4Q9BXB1 951 aa9.43□□□□□ -0.9
RFX3-201ENST00000302303 CAAP1Q9H8G2 361 aa9.43□□□□□ -0.9
RFX3-201ENST00000302303 GPR27Q9NS67 375 aa9.43□□□□□ -0.9
RFX3-201ENST00000302303 ZSCAN32Q9NX65 697 aa9.43□□□□□ -0.9
RFX3-201ENST00000302303 PKD2L2Q9NZM6 624 aa9.43□□□□□ -0.9
RFX3-201ENST00000302303 SAMD15Q9P1V8 674 aa9.43□□□□□ -0.9
RFX3-201ENST00000302303 PLXNB3Q9ULL4 1909 aa9.42□□□□□ -0.9
RFX3-201ENST00000302303 IGLV3-16A0A075B6K0 115 aa9.42□□□□□ -0.9
RFX3-201ENST00000302303 GLYATL1P3A0A0U1RQE8 302 aa9.42□□□□□ -0.9
RFX3-201ENST00000302303 A0A1W2PR77 199 aa9.42□□□□□ -0.9
RFX3-201ENST00000302303 FAM159BA6NKW6 160 aa9.42□□□□□ -0.9
RFX3-201ENST00000302303 FSBPO95073 299 aa9.42□□□□□ -0.9
RFX3-201ENST00000302303 PRAMEF1O95521 474 aa9.42□□□□□ -0.9
RFX3-201ENST00000302303 ACSL3O95573 720 aa9.42□□□□□ -0.9
RFX3-201ENST00000302303 S1PR4O95977 384 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms