RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 DTLQ9NZJ0 730 aa14.38□□□□□ -0.11
CDT1-201ENST00000301019 CCL22O00626 93 aa14.38□□□□□ -0.11
CDT1-201ENST00000301019 MITFO75030 526 aaPredicted RBP14.38□□□□□ -0.11
CDT1-201ENST00000301019 CSF2P04141 144 aa14.38□□□□□ -0.11
CDT1-201ENST00000301019 LCKP06239 509 aa14.38□□□□□ -0.11
CDT1-201ENST00000301019 SERPINH1P50454 418 aaKnown RBP14.38□□□□□ -0.11
CDT1-201ENST00000301019 POU6F1Q14863 301 aa14.38□□□□□ -0.11
CDT1-201ENST00000301019 TRIM60Q495X7 471 aa14.38□□□□□ -0.11
CDT1-201ENST00000301019 LDB1Q86U70 411 aaPredicted RBP14.38□□□□□ -0.11
CDT1-201ENST00000301019 NIPA2Q8N8Q9 360 aa14.38□□□□□ -0.11
CDT1-201ENST00000301019 PIK3R3Q92569 461 aa14.38□□□□□ -0.11
CDT1-201ENST00000301019 SNAPC3Q92966 411 aa14.38□□□□□ -0.11
CDT1-201ENST00000301019 MED30Q96HR3 178 aa14.38□□□□□ -0.11
CDT1-201ENST00000301019 TXNDC15Q96J42 360 aa14.38□□□□□ -0.11
CDT1-201ENST00000301019 FERD3LQ96RJ6 166 aa14.38□□□□□ -0.11
CDT1-201ENST00000301019 MMP28Q9H239 520 aa14.38□□□□□ -0.11
CDT1-201ENST00000301019 ZNF385DQ9H6B1 395 aa14.38□□□□□ -0.11
CDT1-201ENST00000301019 AGO4Q9HCK5 861 aaKnown RBP14.38□□□□□ -0.11
CDT1-201ENST00000301019 ANAPC2Q9UJX6 822 aa14.38□□□□□ -0.11
CDT1-201ENST00000301019 MAU2Q9Y6X3 613 aa14.38□□□□□ -0.11
CDT1-201ENST00000301019 COL4A5P29400 1685 aa14.38□□□□□ -0.11
CDT1-201ENST00000301019 ARHGAP33O14559 1287 aa14.37□□□□□ -0.11
CDT1-201ENST00000301019 PMM2O15305 246 aa14.37□□□□□ -0.11
CDT1-201ENST00000301019 ALDOCP09972 364 aaKnown RBP14.37□□□□□ -0.11
CDT1-201ENST00000301019 LINC00032P0C843 101 aa14.37□□□□□ -0.11
CDT1-201ENST00000301019 THRBP10828 461 aa14.37□□□□□ -0.11
CDT1-201ENST00000301019 GFAPP14136 432 aa14.37□□□□□ -0.11
CDT1-201ENST00000301019 POLR2EP19388 210 aaKnown RBP14.37□□□□□ -0.11
CDT1-201ENST00000301019 RFC2P35250 354 aa14.37□□□□□ -0.11
CDT1-201ENST00000301019 FSCN1Q16658 493 aaKnown RBP14.37□□□□□ -0.11
CDT1-201ENST00000301019 CCDC14Q49A88 953 aa14.37□□□□□ -0.11
CDT1-201ENST00000301019 INTS11Q5TA45 600 aaKnown RBP14.37□□□□□ -0.11
CDT1-201ENST00000301019 P2RY8Q86VZ1 359 aa14.37□□□□□ -0.11
CDT1-201ENST00000301019 PIAS4Q8N2W9 510 aaPredicted RBP14.37□□□□□ -0.11
CDT1-201ENST00000301019 NLGN2Q8NFZ4 835 aa14.37□□□□□ -0.11
CDT1-201ENST00000301019 LRRC39Q96DD0 335 aa14.37□□□□□ -0.11
CDT1-201ENST00000301019 P2RY11Q96G91 374 aa14.37□□□□□ -0.11
CDT1-201ENST00000301019 CPNE1Q99829 537 aa14.37□□□□□ -0.11
CDT1-201ENST00000301019 ROGDIQ9GZN7 287 aa14.37□□□□□ -0.11
CDT1-201ENST00000301019 TLR9Q9NR96 1032 aa14.37□□□□□ -0.11
CDT1-201ENST00000301019 TSR3Q9UJK0 312 aaKnown RBP14.37□□□□□ -0.11
CDT1-201ENST00000301019 INO80B-WBP1J3KQ70 363 aa14.37□□□□□ -0.11
CDT1-201ENST00000301019 GJB1P08034 283 aa14.37□□□□□ -0.11
CDT1-201ENST00000301019 GGT5P36269 586 aa14.37□□□□□ -0.11
CDT1-201ENST00000301019 ARSFP54793 590 aa14.37□□□□□ -0.11
CDT1-201ENST00000301019 DIO3P55073 304 aa14.37□□□□□ -0.11
CDT1-201ENST00000301019 LIPEQ05469 1076 aa14.37□□□□□ -0.11
CDT1-201ENST00000301019 PTCHD3Q3KNS1 767 aa14.37□□□□□ -0.11
CDT1-201ENST00000301019 C6orf141Q5SZD1 244 aa14.37□□□□□ -0.11
CDT1-201ENST00000301019 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.37□□□□□ -0.11
CDT1-201ENST00000301019 ZYG11AQ6WRX3 759 aa14.37□□□□□ -0.11
CDT1-201ENST00000301019 CUZD1Q86UP6 607 aa14.37□□□□□ -0.11
CDT1-201ENST00000301019 NIM1KQ8IY84 436 aa14.37□□□□□ -0.11
CDT1-201ENST00000301019 TMEM192Q8IY95 271 aa14.37□□□□□ -0.11
CDT1-201ENST00000301019 KCNS3Q9BQ31 491 aa14.37□□□□□ -0.11
CDT1-201ENST00000301019 TBCDQ9BTW9 1192 aa14.37□□□□□ -0.11
CDT1-201ENST00000301019 SLC25A23Q9BV35 468 aa14.37□□□□□ -0.11
CDT1-201ENST00000301019 B3GNT4Q9C0J1 378 aa14.37□□□□□ -0.11
CDT1-201ENST00000301019 QPCTLQ9NXS2 382 aa14.37□□□□□ -0.11
CDT1-201ENST00000301019 ARHGAP28Q9P2N2 729 aa14.37□□□□□ -0.11
CDT1-201ENST00000301019 VANGL2Q9ULK5 521 aa14.37□□□□□ -0.11
CDT1-201ENST00000301019 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.37□□□□□ -0.11
CDT1-201ENST00000301019 CLRN2A0PK11 232 aa14.37□□□□□ -0.11
CDT1-201ENST00000301019 TCP10L2B9ZVM9 353 aa14.37□□□□□ -0.11
CDT1-201ENST00000301019 RGS5O15539 181 aa14.37□□□□□ -0.11
CDT1-201ENST00000301019 HCRTO43612 131 aa14.37□□□□□ -0.11
CDT1-201ENST00000301019 UPK1BO75841 260 aa14.37□□□□□ -0.11
CDT1-201ENST00000301019 ASS1P00966 412 aaKnown RBP14.37□□□□□ -0.11
CDT1-201ENST00000301019 PSAPP07602 524 aa14.37□□□□□ -0.11
CDT1-201ENST00000301019 HSMCR30P0CW71 290 aa14.37□□□□□ -0.11
CDT1-201ENST00000301019 SDC4P31431 198 aa14.37□□□□□ -0.11
CDT1-201ENST00000301019 PTGS2P35354 604 aa14.37□□□□□ -0.11
CDT1-201ENST00000301019 GSK3BP49841 420 aa14.37□□□□□ -0.11
CDT1-201ENST00000301019 MTPNP58546 118 aa14.37□□□□□ -0.11
CDT1-201ENST00000301019 NRG1Q02297 640 aaPredicted RBP14.37□□□□□ -0.11
CDT1-201ENST00000301019 SLAMF1Q13291 335 aa14.37□□□□□ -0.11
CDT1-201ENST00000301019 KCNAB2Q13303 367 aa14.37□□□□□ -0.11
CDT1-201ENST00000301019 CDONQ4KMG0 1287 aa14.37□□□□□ -0.11
CDT1-201ENST00000301019 TSTD2Q5T7W7 516 aa14.37□□□□□ -0.11
CDT1-201ENST00000301019 GRTP1Q5TC63 336 aa14.37□□□□□ -0.11
CDT1-201ENST00000301019 SYCE2Q6PIF2 218 aa14.37□□□□□ -0.11
CDT1-201ENST00000301019 ARHGAP36Q6ZRI8 547 aa14.37□□□□□ -0.11
CDT1-201ENST00000301019 CDKL3Q8IVW4 592 aaPredicted RBP14.37□□□□□ -0.11
CDT1-201ENST00000301019 CCDC28AQ8IWP9 274 aa14.37□□□□□ -0.11
CDT1-201ENST00000301019 CCDC185Q8N715 623 aa14.37□□□□□ -0.11
CDT1-201ENST00000301019 ANKRD52Q8NB46 1076 aa14.37□□□□□ -0.11
CDT1-201ENST00000301019 S100ZQ8WXG8 99 aa14.37□□□□□ -0.11
CDT1-201ENST00000301019 TUBGCP3Q96CW5 907 aa14.37□□□□□ -0.11
CDT1-201ENST00000301019 PPM1MQ96MI6 270 aa14.37□□□□□ -0.11
CDT1-201ENST00000301019 MOV10Q9HCE1 1003 aaKnown RBP14.37□□□□□ -0.11
CDT1-201ENST00000301019 NUFIP1Q9UHK0 495 aaKnown RBP14.37□□□□□ -0.11
CDT1-201ENST00000301019 IPPQ9Y573 584 aa14.37□□□□□ -0.11
CDT1-201ENST00000301019 ZNF99A8MXY4 864 aaPredicted RBP14.36□□□□□ -0.11
CDT1-201ENST00000301019 NFKBIEO00221 500 aa14.36□□□□□ -0.11
CDT1-201ENST00000301019 AKR7A2O43488 359 aa14.36□□□□□ -0.11
CDT1-201ENST00000301019 MFSD11O43934 449 aa14.36□□□□□ -0.11
CDT1-201ENST00000301019 PRKACAP17612 351 aa14.36□□□□□ -0.11
CDT1-201ENST00000301019 SERPINB10P48595 397 aa14.36□□□□□ -0.11
CDT1-201ENST00000301019 TAP1Q03518 808 aa14.36□□□□□ -0.11
CDT1-201ENST00000301019 RFTN1Q14699 578 aaPredicted RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms