RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 AFTPHQ6ULP2 937 aa5.55□□□□□ -1.52
CPSF2-201ENST00000298875 PLET1Q6UQ28 207 aa5.55□□□□□ -1.52
CPSF2-201ENST00000298875 GK5Q6ZS86 529 aa5.55□□□□□ -1.52
CPSF2-201ENST00000298875 LMAN2LQ9H0V9 348 aa5.55□□□□□ -1.52
CPSF2-201ENST00000298875 SUCOQ9UBS9 1254 aaKnown RBP5.55□□□□□ -1.52
CPSF2-201ENST00000298875 E7ENX8 843 aa5.55□□□□□ -1.52
CPSF2-201ENST00000298875 AVILO75366 819 aa5.55□□□□□ -1.52
CPSF2-201ENST00000298875 OTCP00480 354 aa5.55□□□□□ -1.52
CPSF2-201ENST00000298875 MNDAP41218 407 aa5.55□□□□□ -1.52
CPSF2-201ENST00000298875 CBX5P45973 191 aa5.55□□□□□ -1.52
CPSF2-201ENST00000298875 DENND1CQ8IV53 801 aa5.55□□□□□ -1.52
CPSF2-201ENST00000298875 NKAPQ8N5F7 415 aaKnown RBP5.55□□□□□ -1.52
CPSF2-201ENST00000298875 SLC4A11Q8NBS3 891 aa5.55□□□□□ -1.52
CPSF2-201ENST00000298875 TLR10Q9BXR5 811 aa5.55□□□□□ -1.52
CPSF2-201ENST00000298875 ABCB9Q9NP78 766 aa5.55□□□□□ -1.52
CPSF2-201ENST00000298875 TAS2R1Q9NYW7 299 aa5.55□□□□□ -1.52
CPSF2-201ENST00000298875 RPL3P39023 403 aaKnown RBP5.55□□□□□ -1.52
CPSF2-201ENST00000298875 SSTP61278 116 aa5.55□□□□□ -1.52
CPSF2-201ENST00000298875 TAMM41Q96BW9 452 aa5.55□□□□□ -1.52
CPSF2-201ENST00000298875 UNKLQ9H9P5 680 aaKnown RBP5.55□□□□□ -1.52
CPSF2-201ENST00000298875 SGK2Q9HBY8 427 aa5.55□□□□□ -1.52
CPSF2-201ENST00000298875 CFL2Q9Y281 166 aa5.55□□□□□ -1.52
CPSF2-201ENST00000298875 TSPAN4O14817 238 aa5.55□□□□□ -1.52
CPSF2-201ENST00000298875 SHOX2O60902 331 aaPredicted RBP5.55□□□□□ -1.52
CPSF2-201ENST00000298875 IL1R1P14778 569 aa5.55□□□□□ -1.52
CPSF2-201ENST00000298875 HNRNPLP14866 589 aaKnown RBP eCLIP5.55□□□□□ -1.52
CPSF2-201ENST00000298875 SNRPD1P62314 119 aaKnown RBP5.55□□□□□ -1.52
CPSF2-201ENST00000298875 ABRQ12979 859 aa5.55□□□□□ -1.52
CPSF2-201ENST00000298875 MFSD10Q14728 455 aa5.55□□□□□ -1.52
CPSF2-201ENST00000298875 TMEM119Q4V9L6 283 aa5.55□□□□□ -1.52
CPSF2-201ENST00000298875 PPP1R26Q5T8A7 1209 aaPredicted RBP5.55□□□□□ -1.52
CPSF2-201ENST00000298875 POMZP3Q6PJE2 187 aa5.55□□□□□ -1.52
CPSF2-201ENST00000298875 ZNF615Q8N8J6 731 aa5.55□□□□□ -1.52
CPSF2-201ENST00000298875 LRRN4Q8WUT4 740 aa5.55□□□□□ -1.52
CPSF2-201ENST00000298875 VAT1Q99536 393 aa5.55□□□□□ -1.52
CPSF2-201ENST00000298875 CCDC177Q9NQR7 707 aaPredicted RBP5.55□□□□□ -1.52
CPSF2-201ENST00000298875 DDX3YO15523 660 aaKnown RBP5.55□□□□□ -1.52
CPSF2-201ENST00000298875 FTH1P02794 183 aa5.55□□□□□ -1.52
CPSF2-201ENST00000298875 CLCN5P51795 746 aa5.55□□□□□ -1.52
CPSF2-201ENST00000298875 IRF8Q02556 426 aa5.55□□□□□ -1.52
CPSF2-201ENST00000298875 MPPE1Q53F39 396 aa5.55□□□□□ -1.52
CPSF2-201ENST00000298875 NEPROQ6NW34 567 aa5.55□□□□□ -1.52
CPSF2-201ENST00000298875 ZYG11AQ6WRX3 759 aa5.55□□□□□ -1.52
CPSF2-201ENST00000298875 CCDC107Q8WV48 283 aa5.55□□□□□ -1.52
CPSF2-201ENST00000298875 ZNF285Q96NJ3 590 aa5.55□□□□□ -1.52
CPSF2-201ENST00000298875 FERD3LQ96RJ6 166 aa5.55□□□□□ -1.52
CPSF2-201ENST00000298875 ATP13A3Q9H7F0 1226 aa5.55□□□□□ -1.52
CPSF2-201ENST00000298875 SNX15Q9NRS6 342 aa5.55□□□□□ -1.52
CPSF2-201ENST00000298875 SAMD4AQ9UPU9 718 aaKnown RBP5.55□□□□□ -1.52
CPSF2-201ENST00000298875 AP4B1Q9Y6B7 739 aa5.55□□□□□ -1.52
CPSF2-201ENST00000298875 ZNF142P52746 1687 aaPredicted RBP5.54□□□□□ -1.52
CPSF2-201ENST00000298875 NDUFS2O75306 463 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 CATP04040 527 aaKnown RBP5.54□□□□□ -1.52
CPSF2-201ENST00000298875 ITGAVP06756 1048 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 NAGLUP54802 743 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 GSCP56915 257 aaPredicted RBP5.54□□□□□ -1.52
CPSF2-201ENST00000298875 TMEM126BQ8IUX1 230 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 CENPSQ8N2Z9 138 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 BSNDQ8WZ55 320 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 INTS7Q9NVH2 962 aaKnown RBP5.54□□□□□ -1.52
CPSF2-201ENST00000298875 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.54□□□□□ -1.52
CPSF2-201ENST00000298875 MED11Q9P086 117 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 PSMD13Q9UNM6 376 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 PRKAB1Q9Y478 270 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 BCKDKO14874 412 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 SLC22A1O15245 554 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 CYP1A2P05177 515 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 GLRA2P23416 452 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 MANFP55145 182 aaKnown RBP5.54□□□□□ -1.52
CPSF2-201ENST00000298875 NT5DC1Q5TFE4 455 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 APTXQ7Z2E3 356 aaKnown RBP5.54□□□□□ -1.52
CPSF2-201ENST00000298875 DNERQ8NFT8 737 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 HM13Q8TCT9 377 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 ACER1Q8TDN7 264 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 TMEM165Q9HC07 324 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 PDP1Q9P0J1 537 aaPredicted RBP5.54□□□□□ -1.52
CPSF2-201ENST00000298875 MGAT4AQ9UM21 535 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 ST3GAL5Q9UNP4 418 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 CLUHO75153 1309 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 A0A1W2PQ72 361 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 H0Y858 1186 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 IFNA6P05013 189 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 IFI30P13284 250 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 GALK1P51570 392 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 FAM189A2Q15884 450 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 PTPN20Q4JDL3 420 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 TRIM40Q6P9F5 258 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 UNC5AQ6ZN44 842 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 GSTCDQ8NEC7 633 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 LINGO1Q96FE5 620 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 ATG10Q9H0Y0 220 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 KANSL3Q9P2N6 904 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 CPA4Q9UI42 421 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 NUP50Q9UKX7 468 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 ZNF451Q9Y4E5 1061 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 DRD4P21917 467 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 RBM34P42696 430 aaKnown RBP5.54□□□□□ -1.52
CPSF2-201ENST00000298875 RAB5BP61020 215 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 ECT2LQ008S8 904 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 ZNF730Q6ZMV8 503 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms