RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 IKZF3Q9UKT9 509 aa11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 FADS3Q9Y5Q0 445 aa11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 A0A1W2PPM1 405 aa11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 CAPN8A6NHC0 703 aa11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 TISP43B9A030 160 aa11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 CBX4O00257 560 aa11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 SERPINA1P01009 418 aa11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 ITGB1P05556 798 aa11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 EPHA3P29320 983 aa11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 NOS2P35228 1153 aa11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 OLR1P78380 273 aa11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 SPIDRQ14159 915 aa11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 GPR65Q8IYL9 337 aa11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 RBM15BQ8NDT2 890 aaKnown RBP11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 GLIS3Q8NEA6 775 aa11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 ZNF671Q8TAW3 534 aa11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 C7orf26Q96N11 449 aa11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 CDK5RAP1Q96SZ6 601 aaKnown RBP11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 HOPXQ9BPY8 73 aaPredicted RBP11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 YIPF2Q9BWQ6 316 aa11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 FBXO44Q9H4M3 255 aa11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 DENND2DQ9H6A0 471 aaPredicted RBP11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 MAN1C1Q9NR34 630 aa11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 PTTG2Q9NZH5 202 aa11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 WBP11Q9Y2W2 641 aaKnown RBP11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 TMEM189-UBE2V1I3L0A0 370 aa11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 TGFB1I1O43294 461 aa11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 KLHL18O94889 574 aa11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 PBX3P40426 434 aa11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 TUFMP49411 452 aaKnown RBP11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 SRP54P61011 504 aaKnown RBP11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 CSNK2BP67870 215 aa11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 KLF10Q13118 480 aa11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 INSCQ1MX18 579 aa11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 NDUFAF6Q330K2 333 aa11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 EIF3MQ7L2H7 374 aaKnown RBP11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 MCFD2Q8NI22 146 aa11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 AP3S1Q92572 193 aa11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 EDEM1Q92611 657 aa11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 FAM126AQ9BYI3 521 aaPredicted RBP11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 POPDC2Q9HBU9 364 aa11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 SEMA4BQ9NPR2 832 aaPredicted RBP11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 DDX43Q9NXZ2 648 aaKnown RBP11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 DNAJB4Q9UDY4 337 aa11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 SNX8Q9Y5X2 465 aa11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 PEX11AO75192 247 aa11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 ITGA2P17301 1181 aa11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 TFEBP19484 476 aa11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 SLC7A2P52569 658 aa11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 EPHB3P54753 998 aa11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 PSMD4P55036 377 aaKnown RBP11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 CDH8P55286 799 aa11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 RAB10P61026 200 aa11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 LPCAT4Q643R3 524 aa11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 PMF1Q6P1K2 205 aa11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 LLGL2Q6P1M3 1020 aa11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 TMEM159Q96B96 161 aa11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 PPP1R14BQ96C90 147 aa11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 MARK4Q96L34 752 aa11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 PNPLA8Q9NP80 782 aa11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 EFR3BQ9Y2G0 817 aa11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 CCDC162PA2VCL2 907 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 HMGB3O15347 200 aaKnown RBP11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 HGFP14210 728 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 GSTM5P46439 218 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 TBX4P57082 545 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 LGALS3BPQ08380 585 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 GRIN2CQ14957 1233 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 PROSER1Q86XN7 944 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 SPPL3Q8TCT6 385 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 C18orf25Q96B23 403 aaPredicted RBP11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 SUSD3Q96L08 255 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 RNF19AQ9NV58 838 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 ING3Q9NXR8 418 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 TRIP12Q14669 1992 aaPredicted RBP11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 INPPL1O15357 1258 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 TRUB2O95900 331 aaKnown RBP11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 CST1P01037 141 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 FESP07332 822 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 IDO1P14902 403 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 ABCG1P45844 678 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 BRCC3P46736 316 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 RFX3P48380 749 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 NOMO3P69849 1222 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 SLC9A5Q14940 896 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 GLT6D1Q7Z4J2 308 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 CLYBLQ8N0X4 340 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 GALNT15Q8N3T1 639 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 TOP6BLQ8N6T0 577 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 ANKRD49Q8WVL7 239 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 HLA-CQ95604 372 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 TLCD1Q96CP7 247 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 SMARCD1Q96GM5 515 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 MFSD14AQ96MC6 490 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 ATXN3LQ9H3M9 355 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 CMTM6Q9NX76 183 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 SLC17A7Q9P2U7 560 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 MAGEL2Q9UJ55 1249 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 ZMYM5Q9UJ78 669 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 UBE2QL1A1L167 161 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms