RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 C6P13671 934 aa18.83■□□□□ 0.6
PDLIM3-202ENST00000284770 CREB1P16220 341 aa18.83■□□□□ 0.6
PDLIM3-202ENST00000284770 GM2AP17900 193 aa18.83■□□□□ 0.6
PDLIM3-202ENST00000284770 OGNP20774 298 aaKnown RBP18.83■□□□□ 0.6
PDLIM3-202ENST00000284770 DCDC1P59894 354 aa18.83■□□□□ 0.6
PDLIM3-202ENST00000284770 PPP2R2AP63151 447 aa18.83■□□□□ 0.6
PDLIM3-202ENST00000284770 CREB5Q02930 508 aa18.83■□□□□ 0.6
PDLIM3-202ENST00000284770 CACNG1Q06432 222 aa18.83■□□□□ 0.6
PDLIM3-202ENST00000284770 ZRANB3Q5FWF4 1079 aa18.83■□□□□ 0.6
PDLIM3-202ENST00000284770 GRTP1Q5TC63 336 aa18.83■□□□□ 0.6
PDLIM3-202ENST00000284770 CYP2U1Q7Z449 544 aa18.83■□□□□ 0.6
PDLIM3-202ENST00000284770 GALNT7Q86SF2 657 aa18.83■□□□□ 0.6
PDLIM3-202ENST00000284770 SDCCAG8Q86SQ7 713 aaPredicted RBP18.83■□□□□ 0.6
PDLIM3-202ENST00000284770 NRSN1Q8IZ57 195 aa18.83■□□□□ 0.6
PDLIM3-202ENST00000284770 SPEM1Q8N4L4 309 aa18.83■□□□□ 0.6
PDLIM3-202ENST00000284770 TSTD1Q8NFU3 115 aa18.83■□□□□ 0.6
PDLIM3-202ENST00000284770 DTX3LQ8TDB6 740 aa18.83■□□□□ 0.6
PDLIM3-202ENST00000284770 SCG3Q8WXD2 468 aaKnown RBP18.83■□□□□ 0.6
PDLIM3-202ENST00000284770 MCMBPQ9BTE3 642 aa18.83■□□□□ 0.6
PDLIM3-202ENST00000284770 FAM83DQ9H4H8 585 aa18.83■□□□□ 0.6
PDLIM3-202ENST00000284770 NFKBIL1Q9UBC1 381 aaPredicted RBP18.83■□□□□ 0.6
PDLIM3-202ENST00000284770 WNT9AO14904 365 aa18.82■□□□□ 0.6
PDLIM3-202ENST00000284770 PCDH8O95206 1070 aa18.82■□□□□ 0.6
PDLIM3-202ENST00000284770 LEPRP48357 1165 aaKnown RBP18.82■□□□□ 0.6
PDLIM3-202ENST00000284770 SERPINB9P50453 376 aa18.82■□□□□ 0.6
PDLIM3-202ENST00000284770 TPMTP51580 245 aa18.82■□□□□ 0.6
PDLIM3-202ENST00000284770 CSE1LP55060 971 aaKnown RBP18.82■□□□□ 0.6
PDLIM3-202ENST00000284770 NFATC2Q13469 925 aa18.82■□□□□ 0.6
PDLIM3-202ENST00000284770 SEMA3AQ14563 771 aa18.82■□□□□ 0.6
PDLIM3-202ENST00000284770 LGSNQ5TDP6 509 aa18.82■□□□□ 0.6
PDLIM3-202ENST00000284770 TAOK1Q7L7X3 1001 aa18.82■□□□□ 0.6
PDLIM3-202ENST00000284770 SNX20Q7Z614 316 aa18.82■□□□□ 0.6
PDLIM3-202ENST00000284770 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.82■□□□□ 0.6
PDLIM3-202ENST00000284770 OR14C36Q8NHC7 312 aa18.82■□□□□ 0.6
PDLIM3-202ENST00000284770 RBBP8Q99708 897 aa18.82■□□□□ 0.6
PDLIM3-202ENST00000284770 ITM2CQ9NQX7 267 aa18.82■□□□□ 0.6
PDLIM3-202ENST00000284770 CD84Q9UIB8 345 aa18.82■□□□□ 0.6
PDLIM3-202ENST00000284770 ADAM21Q9UKJ8 722 aa18.82■□□□□ 0.6
PDLIM3-202ENST00000284770 SCN8AQ9UQD0 1980 aa18.82■□□□□ 0.6
PDLIM3-202ENST00000284770 IQANK1A0A1B0GTG1 560 aa18.81■□□□□ 0.6
PDLIM3-202ENST00000284770 LZTS3O60299 673 aaPredicted RBP18.81■□□□□ 0.6
PDLIM3-202ENST00000284770 S1PR4O95977 384 aa18.81■□□□□ 0.6
PDLIM3-202ENST00000284770 PRSS56P0CW18 603 aa18.81■□□□□ 0.6
PDLIM3-202ENST00000284770 KRT15P19012 456 aa18.81■□□□□ 0.6
PDLIM3-202ENST00000284770 ITGALP20701 1170 aa18.81■□□□□ 0.6
PDLIM3-202ENST00000284770 GABRB3P28472 473 aa18.81■□□□□ 0.6
PDLIM3-202ENST00000284770 CDKN1CP49918 316 aaPredicted RBP18.81■□□□□ 0.6
PDLIM3-202ENST00000284770 ADPRHP54922 357 aa18.81■□□□□ 0.6
PDLIM3-202ENST00000284770 MPP1Q00013 466 aa18.81■□□□□ 0.6
PDLIM3-202ENST00000284770 CHRNA6Q15825 494 aa18.81■□□□□ 0.6
PDLIM3-202ENST00000284770 TYSND1Q2T9J0 566 aa18.81■□□□□ 0.6
PDLIM3-202ENST00000284770 AARS2Q5JTZ9 985 aaKnown RBP18.81■□□□□ 0.6
PDLIM3-202ENST00000284770 PSAPL1Q6NUJ1 521 aa18.81■□□□□ 0.6
PDLIM3-202ENST00000284770 LDB1Q86U70 411 aaPredicted RBP18.81■□□□□ 0.6
PDLIM3-202ENST00000284770 SRRM1Q8IYB3 904 aaKnown RBP18.81■□□□□ 0.6
PDLIM3-202ENST00000284770 PIANPQ8IYJ0 282 aa18.81■□□□□ 0.6
PDLIM3-202ENST00000284770 CNPY4Q8N129 248 aa18.81■□□□□ 0.6
PDLIM3-202ENST00000284770 PGBD3Q8N328 593 aa18.81■□□□□ 0.6
PDLIM3-202ENST00000284770 ZNF398Q8TD17 642 aa18.81■□□□□ 0.6
PDLIM3-202ENST00000284770 DTD2Q96FN9 168 aa18.81■□□□□ 0.6
PDLIM3-202ENST00000284770 TCF12Q99081 682 aa18.81■□□□□ 0.6
PDLIM3-202ENST00000284770 FAM96AQ9H5X1 160 aa18.81■□□□□ 0.6
PDLIM3-202ENST00000284770 ASB8Q9H765 288 aa18.81■□□□□ 0.6
PDLIM3-202ENST00000284770 COQ6Q9Y2Z9 468 aa18.81■□□□□ 0.6
PDLIM3-202ENST00000284770 A0A1W2PPM1 405 aa18.81■□□□□ 0.6
PDLIM3-202ENST00000284770 HMX2A2RU54 273 aa18.81■□□□□ 0.6
PDLIM3-202ENST00000284770 AGAP14A8MT82 685 aa18.81■□□□□ 0.6
PDLIM3-202ENST00000284770 RRP9O43818 475 aaKnown RBP18.81■□□□□ 0.6
PDLIM3-202ENST00000284770 KRT37O76014 449 aa18.81■□□□□ 0.6
PDLIM3-202ENST00000284770 KRT38O76015 456 aa18.81■□□□□ 0.6
PDLIM3-202ENST00000284770 RECQL5O94762 991 aaPredicted RBP18.81■□□□□ 0.6
PDLIM3-202ENST00000284770 DCNP07585 359 aaKnown RBP18.81■□□□□ 0.6
PDLIM3-202ENST00000284770 F7P08709 466 aaPredicted RBP18.81■□□□□ 0.6
PDLIM3-202ENST00000284770 VCANP13611 3396 aa18.81■□□□□ 0.6
PDLIM3-202ENST00000284770 CNTFP26441 200 aa18.81■□□□□ 0.6
PDLIM3-202ENST00000284770 PMLP29590 882 aa18.81■□□□□ 0.6
PDLIM3-202ENST00000284770 SPRP35270 261 aaPredicted RBP18.81■□□□□ 0.6
PDLIM3-202ENST00000284770 GPR33Q49SQ1 333 aa18.81■□□□□ 0.6
PDLIM3-202ENST00000284770 HENMT1Q5T8I9 393 aaKnown RBP18.81■□□□□ 0.6
PDLIM3-202ENST00000284770 ANO7Q6IWH7 933 aa18.81■□□□□ 0.6
PDLIM3-202ENST00000284770 PNPLA1Q8N8W4 532 aa18.81■□□□□ 0.6
PDLIM3-202ENST00000284770 SCAMP4Q969E2 229 aa18.81■□□□□ 0.6
PDLIM3-202ENST00000284770 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.81■□□□□ 0.6
PDLIM3-202ENST00000284770 HHIPQ96QV1 700 aa18.81■□□□□ 0.6
PDLIM3-202ENST00000284770 UHRF1Q96T88 793 aaPredicted RBP18.81■□□□□ 0.6
PDLIM3-202ENST00000284770 KDM4CQ9H3R0 1056 aa18.81■□□□□ 0.6
PDLIM3-202ENST00000284770 SENP1Q9P0U3 644 aa18.81■□□□□ 0.6
PDLIM3-202ENST00000284770 USP36Q9P275 1121 aaKnown RBP18.81■□□□□ 0.6
PDLIM3-202ENST00000284770 EBF1Q9UH73 591 aa18.81■□□□□ 0.6
PDLIM3-202ENST00000284770 GPR39O43194 453 aa18.8■□□□□ 0.6
PDLIM3-202ENST00000284770 DCXO43602 365 aa18.8■□□□□ 0.6
PDLIM3-202ENST00000284770 HAUS5O94927 633 aa18.8■□□□□ 0.6
PDLIM3-202ENST00000284770 TTPAP49638 278 aa18.8■□□□□ 0.6
PDLIM3-202ENST00000284770 ATP1A2P50993 1020 aa18.8■□□□□ 0.6
PDLIM3-202ENST00000284770 MTAPQ13126 283 aa18.8■□□□□ 0.6
PDLIM3-202ENST00000284770 ITGA9Q13797 1035 aa18.8■□□□□ 0.6
PDLIM3-202ENST00000284770 CERS6Q6ZMG9 384 aa18.8■□□□□ 0.6
PDLIM3-202ENST00000284770 ZNF765Q7L2R6 523 aa18.8■□□□□ 0.6
PDLIM3-202ENST00000284770 TAS2R42Q7RTR8 314 aa18.8■□□□□ 0.6
PDLIM3-202ENST00000284770 ZC3HC1Q86WB0 502 aaKnown RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms