RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 THAP5Q7Z6K1 395 aa8.71□□□□□ -1.02
NIPBL-201ENST00000282516 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.71□□□□□ -1.02
NIPBL-201ENST00000282516 CMTR2Q8IYT2 770 aaKnown RBP8.71□□□□□ -1.02
NIPBL-201ENST00000282516 OR2T12Q8NG77 320 aa8.71□□□□□ -1.02
NIPBL-201ENST00000282516 SMURF1Q9HCE7 757 aa8.71□□□□□ -1.02
NIPBL-201ENST00000282516 MAGEE1Q9HCI5 957 aa8.71□□□□□ -1.02
NIPBL-201ENST00000282516 RAP2CQ9Y3L5 183 aa8.71□□□□□ -1.02
NIPBL-201ENST00000282516 PPM1AP35813 382 aa8.71□□□□□ -1.02
NIPBL-201ENST00000282516 PIK3CBP42338 1070 aa8.71□□□□□ -1.02
NIPBL-201ENST00000282516 GIT2Q14161 759 aa8.71□□□□□ -1.02
NIPBL-201ENST00000282516 ASB8Q9H765 288 aa8.71□□□□□ -1.02
NIPBL-201ENST00000282516 AGRPO00253 132 aa8.71□□□□□ -1.02
NIPBL-201ENST00000282516 FGF1P05230 155 aa8.71□□□□□ -1.02
NIPBL-201ENST00000282516 ZNF20P17024 532 aa8.71□□□□□ -1.02
NIPBL-201ENST00000282516 NDST1P52848 882 aa8.71□□□□□ -1.02
NIPBL-201ENST00000282516 GRIK4Q16099 956 aa8.71□□□□□ -1.02
NIPBL-201ENST00000282516 MAPK14Q16539 360 aa8.71□□□□□ -1.02
NIPBL-201ENST00000282516 COLEC12Q5KU26 742 aa8.71□□□□□ -1.02
NIPBL-201ENST00000282516 LINGO2Q7L985 606 aa8.71□□□□□ -1.02
NIPBL-201ENST00000282516 RBFAQ8N0V3 343 aa8.71□□□□□ -1.02
NIPBL-201ENST00000282516 MKL1Q969V6 931 aa8.71□□□□□ -1.02
NIPBL-201ENST00000282516 COQ8BQ96D53 544 aa8.71□□□□□ -1.02
NIPBL-201ENST00000282516 ABCB9Q9NP78 766 aa8.71□□□□□ -1.02
NIPBL-201ENST00000282516 ETNK2Q9NVF9 386 aa8.71□□□□□ -1.02
NIPBL-201ENST00000282516 MOXD2PA6NHM9 499 aa8.71□□□□□ -1.02
NIPBL-201ENST00000282516 KCNK1O00180 336 aa8.71□□□□□ -1.02
NIPBL-201ENST00000282516 ADH1CP00326 375 aa8.71□□□□□ -1.02
NIPBL-201ENST00000282516 IFNW1P05000 195 aa8.71□□□□□ -1.02
NIPBL-201ENST00000282516 ITPKBP27987 946 aa8.71□□□□□ -1.02
NIPBL-201ENST00000282516 SSTR1P30872 391 aa8.71□□□□□ -1.02
NIPBL-201ENST00000282516 PRKCDQ05655 676 aa8.71□□□□□ -1.02
NIPBL-201ENST00000282516 CES5AQ6NT32 575 aa8.71□□□□□ -1.02
NIPBL-201ENST00000282516 ARL10Q8N8L6 244 aa8.71□□□□□ -1.02
NIPBL-201ENST00000282516 ANKRA2Q9H9E1 313 aa8.71□□□□□ -1.02
NIPBL-201ENST00000282516 PIH1D1Q9NWS0 290 aaKnown RBP8.71□□□□□ -1.02
NIPBL-201ENST00000282516 E7ENX8 843 aa8.71□□□□□ -1.02
NIPBL-201ENST00000282516 HDAC3O15379 428 aa8.71□□□□□ -1.02
NIPBL-201ENST00000282516 TTMPQ5BVD1 217 aa8.71□□□□□ -1.02
NIPBL-201ENST00000282516 CLEC10AQ8IUN9 316 aa8.71□□□□□ -1.02
NIPBL-201ENST00000282516 FUKQ8N0W3 1084 aa8.71□□□□□ -1.02
NIPBL-201ENST00000282516 BRINP2Q9C0B6 783 aa8.71□□□□□ -1.02
NIPBL-201ENST00000282516 CUEDC1Q9NWM3 386 aaPredicted RBP8.71□□□□□ -1.02
NIPBL-201ENST00000282516 DGKBQ9Y6T7 804 aa8.71□□□□□ -1.02
NIPBL-201ENST00000282516 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.7□□□□□ -1.024e-6■■■□□ 15.9
NIPBL-201ENST00000282516 ITGAVP06756 1048 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 SULT2A1Q06520 285 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 PARP8Q8N3A8 854 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 OR2T34Q8NGX1 318 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 OR2T3Q8NH03 318 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 UFD1Q92890 307 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 CLDN25C9JDP6 229 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 FPGTO14772 594 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 KELP23276 732 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 RPL22P35268 128 aaKnown RBP8.7□□□□□ -1.02
NIPBL-201ENST00000282516 NUMBP49757 651 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 TUBA1BP68363 451 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 BTG3Q14201 252 aaPredicted RBP8.7□□□□□ -1.02
NIPBL-201ENST00000282516 FAM182BQ5T319 152 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 SERPINA13PQ6UXR4 307 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 TUBA1AQ71U36 451 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 LAPTM4BQ86VI4 370 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 GMCL1P1Q8NEA9 526 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 C15orf40Q8WUR7 153 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 CERS2Q96G23 380 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 OSGEPQ9NPF4 335 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 GRHL1Q9NZI5 618 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 COPS7AQ9UBW8 275 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 DUSP10Q9Y6W6 482 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 RIC1Q4ADV7 1423 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 DDX3XO00571 662 aaKnown RBP eCLIP8.7□□□□□ -1.025e-11■■□□□ 12.2
NIPBL-201ENST00000282516 TRMUO75648 421 aaKnown RBP8.7□□□□□ -1.02
NIPBL-201ENST00000282516 ADAM17P78536 824 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 IFI35P80217 286 aaPredicted RBP8.7□□□□□ -1.02
NIPBL-201ENST00000282516 SLC5A9Q2M3M2 681 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 SLC39A12Q504Y0 691 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 FAM76BQ5HYJ3 339 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 AHSA2Q719I0 299 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 P2RY8Q86VZ1 359 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 SCUBE3Q8IX30 993 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 ZKSCAN4Q969J2 545 aaPredicted RBP8.7□□□□□ -1.02
NIPBL-201ENST00000282516 CDH19Q9H159 772 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 MOCS1Q9NZB8 636 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 HMGXB4Q9UGU5 601 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 MID1O15344 667 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 TGDSO95455 350 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 FABP3P05413 133 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 LINC00032P0C843 101 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 CCNCP24863 283 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 RPP38P78345 283 aaKnown RBP8.7□□□□□ -1.02
NIPBL-201ENST00000282516 PRR5P85299 388 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 SLC25A3Q00325 362 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 NDUFA9Q16795 377 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 C16orf59Q7L2K0 433 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 FAM13CQ8NE31 585 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 METTL21AQ8WXB1 218 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 FCGR1BQ92637 280 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 KXD1Q9BQD3 176 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 GPRC5CQ9NQ84 441 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 STARD7Q9NQZ5 370 aa8.7□□□□□ -1.02
NIPBL-201ENST00000282516 H0Y858 1186 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms