RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 AMD1P17707 334 aa13.95□□□□□ -0.18
CDH3-201ENST00000264012 ATP6V1C1P21283 382 aa13.95□□□□□ -0.18
CDH3-201ENST00000264012 CHN2P52757 468 aa13.95□□□□□ -0.18
CDH3-201ENST00000264012 OGDHQ02218 1023 aa13.95□□□□□ -0.18
CDH3-201ENST00000264012 AP5B1Q2VPB7 878 aa13.95□□□□□ -0.18
CDH3-201ENST00000264012 CYP4X1Q8N118 509 aa13.95□□□□□ -0.18
CDH3-201ENST00000264012 BRSK1Q8TDC3 778 aa13.95□□□□□ -0.18
CDH3-201ENST00000264012 MRPL48Q96GC5 212 aaKnown RBP13.95□□□□□ -0.18
CDH3-201ENST00000264012 SUSD3Q96L08 255 aa13.95□□□□□ -0.18
CDH3-201ENST00000264012 OSBPL6Q9BZF3 934 aa13.95□□□□□ -0.18
CDH3-201ENST00000264012 DNAJC28Q9NX36 388 aa13.95□□□□□ -0.18
CDH3-201ENST00000264012 SIX4Q9UIU6 781 aa13.95□□□□□ -0.18
CDH3-201ENST00000264012 ISM1B1AKI9 464 aa13.94□□□□□ -0.18
CDH3-201ENST00000264012 PAICSP22234 425 aaKnown RBP13.94□□□□□ -0.18
CDH3-201ENST00000264012 TAS2R39P59534 338 aa13.94□□□□□ -0.18
CDH3-201ENST00000264012 PPIDQ08752 370 aaKnown RBP13.94□□□□□ -0.18
CDH3-201ENST00000264012 ITCHQ96J02 903 aa13.94□□□□□ -0.18
CDH3-201ENST00000264012 TSSK3Q96PN8 268 aa13.94□□□□□ -0.18
CDH3-201ENST00000264012 TLR6Q9Y2C9 796 aa13.94□□□□□ -0.18
CDH3-201ENST00000264012 KDM3BQ7LBC6 1761 aa13.94□□□□□ -0.18
CDH3-201ENST00000264012 BBIP1A8MTZ0 92 aa13.94□□□□□ -0.18
CDH3-201ENST00000264012 H0Y858 1186 aa13.94□□□□□ -0.18
CDH3-201ENST00000264012 FAM163BP0C2L3 166 aa13.94□□□□□ -0.18
CDH3-201ENST00000264012 GUCA1AP43080 201 aaPredicted RBP13.94□□□□□ -0.18
CDH3-201ENST00000264012 CHRNA4P43681 627 aa13.94□□□□□ -0.18
CDH3-201ENST00000264012 NCBP2-AS2Q69YL0 99 aa13.94□□□□□ -0.18
CDH3-201ENST00000264012 ARHGAP36Q6ZRI8 547 aa13.94□□□□□ -0.18
CDH3-201ENST00000264012 VN1R5Q7Z5H4 357 aa13.94□□□□□ -0.18
CDH3-201ENST00000264012 CCDC103Q8IW40 242 aa13.94□□□□□ -0.18
CDH3-201ENST00000264012 KCTD13Q8WZ19 329 aa13.94□□□□□ -0.18
CDH3-201ENST00000264012 SEZ6LQ9BYH1 1024 aa13.94□□□□□ -0.18
CDH3-201ENST00000264012 GRIP2Q9C0E4 1043 aa13.94□□□□□ -0.18
CDH3-201ENST00000264012 FAM83DQ9H4H8 585 aa13.94□□□□□ -0.18
CDH3-201ENST00000264012 CORO2BQ9UQ03 480 aa13.94□□□□□ -0.18
CDH3-201ENST00000264012 GNPDA1P46926 289 aa13.94□□□□□ -0.18
CDH3-201ENST00000264012 KIAA0930Q6ICG6 404 aaPredicted RBP13.94□□□□□ -0.18
CDH3-201ENST00000264012 OLFML1Q6UWY5 402 aa13.94□□□□□ -0.18
CDH3-201ENST00000264012 SPATA19Q7Z5L4 167 aa13.94□□□□□ -0.18
CDH3-201ENST00000264012 COLGALT2Q8IYK4 626 aa13.94□□□□□ -0.18
CDH3-201ENST00000264012 TWIST2Q8WVJ9 160 aa13.94□□□□□ -0.18
CDH3-201ENST00000264012 SNRNP27Q8WVK2 155 aaKnown RBP13.94□□□□□ -0.18
CDH3-201ENST00000264012 FCRL5Q96RD9 977 aa13.94□□□□□ -0.18
CDH3-201ENST00000264012 GDAP2Q9NXN4 497 aa13.94□□□□□ -0.18
CDH3-201ENST00000264012 C3orf18Q9UK00 162 aa13.94□□□□□ -0.18
CDH3-201ENST00000264012 ANGPT4Q9Y264 503 aa13.94□□□□□ -0.18
CDH3-201ENST00000264012 C9IYK1 514 aa13.94□□□□□ -0.18
CDH3-201ENST00000264012 H3BM21 787 aa13.94□□□□□ -0.18
CDH3-201ENST00000264012 NFATC1O95644 943 aa13.94□□□□□ -0.18
CDH3-201ENST00000264012 KRT75O95678 551 aa13.94□□□□□ -0.18
CDH3-201ENST00000264012 GJA9P57773 515 aa13.94□□□□□ -0.18
CDH3-201ENST00000264012 PURAQ00577 322 aaKnown RBP13.94□□□□□ -0.18
CDH3-201ENST00000264012 ROR2Q01974 943 aaKnown RBP13.94□□□□□ -0.18
CDH3-201ENST00000264012 FBXO48Q5FWF7 155 aa13.94□□□□□ -0.18
CDH3-201ENST00000264012 CAPN13Q6MZZ7 669 aaPredicted RBP13.94□□□□□ -0.18
CDH3-201ENST00000264012 R3HCC1LQ7Z5L2 792 aaKnown RBP13.94□□□□□ -0.18
CDH3-201ENST00000264012 FSTL5Q8N475 847 aaPredicted RBP13.94□□□□□ -0.18
CDH3-201ENST00000264012 MTERF3Q96E29 417 aa13.94□□□□□ -0.18
CDH3-201ENST00000264012 HOPXQ9BPY8 73 aaPredicted RBP13.94□□□□□ -0.18
CDH3-201ENST00000264012 DNAJC11Q9NVH1 559 aa13.94□□□□□ -0.18
CDH3-201ENST00000264012 DDX18Q9NVP1 670 aaKnown RBP13.94□□□□□ -0.18
CDH3-201ENST00000264012 KLHL3Q9UH77 587 aa13.94□□□□□ -0.18
CDH3-201ENST00000264012 FKBPLQ9UIM3 349 aa13.94□□□□□ -0.18
CDH3-201ENST00000264012 CACNB4O00305 520 aaPredicted RBP13.93□□□□□ -0.18
CDH3-201ENST00000264012 ATG13O75143 517 aa13.93□□□□□ -0.18
CDH3-201ENST00000264012 ERAL1O75616 437 aaKnown RBP13.93□□□□□ -0.18
CDH3-201ENST00000264012 DNTTP04053 509 aa13.93□□□□□ -0.18
CDH3-201ENST00000264012 C8AP07357 584 aa13.93□□□□□ -0.18
CDH3-201ENST00000264012 CLEC6AQ6EIG7 209 aa13.93□□□□□ -0.18
CDH3-201ENST00000264012 DCBLD1Q8N8Z6 715 aa13.93□□□□□ -0.18
CDH3-201ENST00000264012 APOLD1Q96LR9 279 aa13.93□□□□□ -0.18
CDH3-201ENST00000264012 FERD3LQ96RJ6 166 aa13.93□□□□□ -0.18
CDH3-201ENST00000264012 TCF12Q99081 682 aa13.93□□□□□ -0.18
CDH3-201ENST00000264012 PCYT2Q99447 389 aa13.93□□□□□ -0.18
CDH3-201ENST00000264012 SLC28A3Q9HAS3 691 aa13.93□□□□□ -0.18
CDH3-201ENST00000264012 TMEM59LQ9UK28 342 aa13.93□□□□□ -0.18
CDH3-201ENST00000264012 ZNF490Q9ULM2 529 aaPredicted RBP13.93□□□□□ -0.18
CDH3-201ENST00000264012 VPS4AQ9UN37 437 aa13.93□□□□□ -0.18
CDH3-201ENST00000264012 TCRBV7S3A2A0A539 114 aa13.93□□□□□ -0.18
CDH3-201ENST00000264012 POP4O95707 220 aaKnown RBP13.93□□□□□ -0.18
CDH3-201ENST00000264012 SNAI1O95863 264 aaPredicted RBP13.93□□□□□ -0.18
CDH3-201ENST00000264012 VAV1P15498 845 aa13.93□□□□□ -0.18
CDH3-201ENST00000264012 LCP2Q13094 533 aa13.93□□□□□ -0.18
CDH3-201ENST00000264012 ZNF460Q14592 562 aa13.93□□□□□ -0.18
CDH3-201ENST00000264012 PDK3Q15120 406 aa13.93□□□□□ -0.18
CDH3-201ENST00000264012 HFE2Q6ZVN8 426 aa13.93□□□□□ -0.18
CDH3-201ENST00000264012 GET4Q7L5D6 327 aaPredicted RBP13.93□□□□□ -0.18
CDH3-201ENST00000264012 TCAIMQ8N3R3 496 aa13.93□□□□□ -0.18
CDH3-201ENST00000264012 CPSF7Q8N684 471 aaKnown RBP13.93□□□□□ -0.18
CDH3-201ENST00000264012 CLHC1Q8NHS4 586 aa13.93□□□□□ -0.18
CDH3-201ENST00000264012 AARSD1Q9BTE6 412 aaKnown RBP13.93□□□□□ -0.18
CDH3-201ENST00000264012 SRRDQ9UH36 339 aa13.93□□□□□ -0.18
CDH3-201ENST00000264012 BAZ2AQ9UIF9 1905 aaKnown RBP13.93□□□□□ -0.18
CDH3-201ENST00000264012 FAM47E-STBD1D6RA91 191 aa13.93□□□□□ -0.18
CDH3-201ENST00000264012 GRIA1P42261 906 aa13.93□□□□□ -0.18
CDH3-201ENST00000264012 RPS24P62847 133 aaKnown RBP13.93□□□□□ -0.18
CDH3-201ENST00000264012 ELP6Q0PNE2 266 aa13.93□□□□□ -0.18
CDH3-201ENST00000264012 PPIGQ13427 754 aaKnown RBP eCLIP13.93□□□□□ -0.18
CDH3-201ENST00000264012 GSTA3Q16772 222 aa13.93□□□□□ -0.18
CDH3-201ENST00000264012 BHLHB9Q6PI77 547 aa13.93□□□□□ -0.18
CDH3-201ENST00000264012 AP2M1Q96CW1 435 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms