RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 SATB2Q9UPW6 733 aa15.99■□□□□ 0.15
USE1-201ENST00000263897 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.99■□□□□ 0.15
USE1-201ENST00000263897 ST14Q9Y5Y6 855 aa15.99■□□□□ 0.15
USE1-201ENST00000263897 RNF215Q9Y6U7 377 aa15.99■□□□□ 0.15
USE1-201ENST00000263897 hCG_1818297A0A087WSY0 165 aa15.98■□□□□ 0.15
USE1-201ENST00000263897 RCCD1A6NED2 376 aa15.98■□□□□ 0.15
USE1-201ENST00000263897 SOWAHDA6NJG2 315 aa15.98■□□□□ 0.15
USE1-201ENST00000263897 TMX2-CTNND1H3BSU7 103 aa15.98■□□□□ 0.15
USE1-201ENST00000263897 INPP4BO15327 924 aa15.98■□□□□ 0.15
USE1-201ENST00000263897 NUDT21O43809 227 aaKnown RBP15.98■□□□□ 0.15
USE1-201ENST00000263897 RPLP0P05388 317 aaKnown RBP15.98■□□□□ 0.15
USE1-201ENST00000263897 PECAM1P16284 738 aaPredicted RBP15.98■□□□□ 0.15
USE1-201ENST00000263897 PTPN3P26045 913 aa15.98■□□□□ 0.15
USE1-201ENST00000263897 ABCG1P45844 678 aa15.98■□□□□ 0.15
USE1-201ENST00000263897 PDX1P52945 283 aa15.98■□□□□ 0.15
USE1-201ENST00000263897 CDK18Q07002 472 aa15.98■□□□□ 0.15
USE1-201ENST00000263897 GALNT3Q14435 633 aa15.98■□□□□ 0.15
USE1-201ENST00000263897 PYCR3Q53H96 274 aa15.98■□□□□ 0.15
USE1-201ENST00000263897 C3orf38Q5JPI3 329 aa15.98■□□□□ 0.15
USE1-201ENST00000263897 DAAM2Q86T65 1068 aa15.98■□□□□ 0.15
USE1-201ENST00000263897 TRIM74Q86UV6 250 aa15.98■□□□□ 0.15
USE1-201ENST00000263897 CCNJLQ8IV13 435 aa15.98■□□□□ 0.15
USE1-201ENST00000263897 Q8N9G6 341 aaPredicted RBP15.98■□□□□ 0.15
USE1-201ENST00000263897 SPATA22Q8NHS9 363 aa15.98■□□□□ 0.15
USE1-201ENST00000263897 WDR36Q8NI36 951 aaKnown RBP15.98■□□□□ 0.15
USE1-201ENST00000263897 ZDHHC1Q8WTX9 485 aa15.98■□□□□ 0.15
USE1-201ENST00000263897 P3H4Q92791 437 aa15.98■□□□□ 0.15
USE1-201ENST00000263897 EID2BQ96D98 161 aa15.98■□□□□ 0.15
USE1-201ENST00000263897 PRR11Q96HE9 360 aaPredicted RBP15.98■□□□□ 0.15
USE1-201ENST00000263897 SLC46A1Q96NT5 459 aa15.98■□□□□ 0.15
USE1-201ENST00000263897 ZFYVE1Q9HBF4 777 aa15.98■□□□□ 0.15
USE1-201ENST00000263897 MAGEE1Q9HCI5 957 aa15.98■□□□□ 0.15
USE1-201ENST00000263897 ASCL3Q9NQ33 180 aa15.98■□□□□ 0.15
USE1-201ENST00000263897 PKD2L2Q9NZM6 624 aa15.98■□□□□ 0.15
USE1-201ENST00000263897 PCDHGA8Q9Y5G5 932 aa15.98■□□□□ 0.15
USE1-201ENST00000263897 IGSF10Q6WRI0 2623 aa15.97■□□□□ 0.15
USE1-201ENST00000263897 CCDC187A0A096LP49 1063 aa15.97■□□□□ 0.15
USE1-201ENST00000263897 MTSS1O43312 755 aa15.97■□□□□ 0.15
USE1-201ENST00000263897 ASMTLO95671 621 aa15.97■□□□□ 0.15
USE1-201ENST00000263897 MT-CYBP00156 380 aaPredicted RBP15.97■□□□□ 0.15
USE1-201ENST00000263897 RBMS1P29558 406 aaKnown RBP15.97■□□□□ 0.15
USE1-201ENST00000263897 MARCKSL1P49006 195 aa15.97■□□□□ 0.15
USE1-201ENST00000263897 WASHC5Q12768 1159 aa15.97■□□□□ 0.15
USE1-201ENST00000263897 PEX6Q13608 980 aa15.97■□□□□ 0.15
USE1-201ENST00000263897 HENMT1Q5T8I9 393 aaKnown RBP15.97■□□□□ 0.15
USE1-201ENST00000263897 CCDC70Q6NSX1 233 aa15.97■□□□□ 0.15
USE1-201ENST00000263897 SLC30A9Q6PML9 568 aa15.97■□□□□ 0.15
USE1-201ENST00000263897 LYSMD3Q7Z3D4 306 aa15.97■□□□□ 0.15
USE1-201ENST00000263897 TMC3Q7Z5M5 1100 aa15.97■□□□□ 0.15
USE1-201ENST00000263897 KRT35Q92764 455 aa15.97■□□□□ 0.15
USE1-201ENST00000263897 LIN37Q96GY3 246 aaPredicted RBP15.97■□□□□ 0.15
USE1-201ENST00000263897 RBM41Q96IZ5 413 aaKnown RBP15.97■□□□□ 0.15
USE1-201ENST00000263897 CALR3Q96L12 384 aaKnown RBP15.97■□□□□ 0.15
USE1-201ENST00000263897 OR2M4Q96R27 311 aa15.97■□□□□ 0.15
USE1-201ENST00000263897 CDH19Q9H159 772 aa15.97■□□□□ 0.15
USE1-201ENST00000263897 PLEKHM1Q9Y4G2 1056 aa15.97■□□□□ 0.15
USE1-201ENST00000263897 DUSP10Q9Y6W6 482 aa15.97■□□□□ 0.15
USE1-201ENST00000263897 NBEAQ8NFP9 2946 aa15.97■□□□□ 0.15
USE1-201ENST00000263897 CELSR3Q9NYQ7 3312 aa15.96■□□□□ 0.15
USE1-201ENST00000263897 LAMA5O15230 3695 aa15.96■□□□□ 0.15
USE1-201ENST00000263897 FADS2P1A8MWK0 482 aa15.96■□□□□ 0.15
USE1-201ENST00000263897 D6RAR5 112 aa15.96■□□□□ 0.15
USE1-201ENST00000263897 B4GAT1O43505 415 aa15.96■□□□□ 0.15
USE1-201ENST00000263897 PMPCBO75439 489 aa15.96■□□□□ 0.15
USE1-201ENST00000263897 IPO7O95373 1038 aaKnown RBP15.96■□□□□ 0.15
USE1-201ENST00000263897 ECEL1O95672 775 aa15.96■□□□□ 0.15
USE1-201ENST00000263897 NDST3O95803 873 aa15.96■□□□□ 0.15
USE1-201ENST00000263897 ATP1A1P05023 1023 aaKnown RBP15.96■□□□□ 0.15
USE1-201ENST00000263897 PIRTP0C851 137 aa15.96■□□□□ 0.15
USE1-201ENST00000263897 CD68P34810 354 aaPredicted RBP15.96■□□□□ 0.15
USE1-201ENST00000263897 MAZP56270 477 aaKnown RBP15.96■□□□□ 0.15
USE1-201ENST00000263897 PCBP4P57723 403 aaKnown RBP15.96■□□□□ 0.15
USE1-201ENST00000263897 B4GALNT1Q00973 533 aa15.96■□□□□ 0.15
USE1-201ENST00000263897 CCDC173Q0VFZ6 552 aa15.96■□□□□ 0.15
USE1-201ENST00000263897 PCSK7Q16549 785 aa15.96■□□□□ 0.15
USE1-201ENST00000263897 RAD9BQ6WBX8 426 aa15.96■□□□□ 0.15
USE1-201ENST00000263897 MARK2Q7KZI7 788 aaKnown RBP15.96■□□□□ 0.15
USE1-201ENST00000263897 SPRED1Q7Z699 444 aa15.96■□□□□ 0.15
USE1-201ENST00000263897 B3GNT8Q7Z7M8 397 aa15.96■□□□□ 0.15
USE1-201ENST00000263897 ZC3H18Q86VM9 953 aaKnown RBP15.96■□□□□ 0.15
USE1-201ENST00000263897 CCDC50Q8IVM0 306 aa15.96■□□□□ 0.15
USE1-201ENST00000263897 NAGSQ8N159 534 aa15.96■□□□□ 0.15
USE1-201ENST00000263897 ARL14Q8N4G2 192 aa15.96■□□□□ 0.15
USE1-201ENST00000263897 ZNF248Q8NDW4 579 aa15.96■□□□□ 0.15
USE1-201ENST00000263897 CRELD1Q96HD1 420 aa15.96■□□□□ 0.15
USE1-201ENST00000263897 VAT1Q99536 393 aa15.96■□□□□ 0.15
USE1-201ENST00000263897 HEMGNQ9BXL5 484 aa15.96■□□□□ 0.15
USE1-201ENST00000263897 THSD1Q9NS62 852 aa15.96■□□□□ 0.15
USE1-201ENST00000263897 UBP1Q9NZI7 540 aa15.96■□□□□ 0.15
USE1-201ENST00000263897 VPS18Q9P253 973 aa15.96■□□□□ 0.15
USE1-201ENST00000263897 ZNHIT2Q9UHR6 403 aa15.96■□□□□ 0.15
USE1-201ENST00000263897 SHOC2Q9UQ13 582 aa15.96■□□□□ 0.15
USE1-201ENST00000263897 REXO2Q9Y3B8 237 aaKnown RBP15.96■□□□□ 0.15
USE1-201ENST00000263897 PCDHA3Q9Y5H8 950 aa15.96■□□□□ 0.15
USE1-201ENST00000263897 ZFC3H1O60293 1989 aaKnown RBP15.96■□□□□ 0.15
USE1-201ENST00000263897 ZFHX4Q86UP3 3567 aa15.95■□□□□ 0.14
USE1-201ENST00000263897 PMS2P1A4D2B8 440 aa15.95■□□□□ 0.14
USE1-201ENST00000263897 BTNL10A8MVZ5 291 aa15.95■□□□□ 0.14
USE1-201ENST00000263897 DNAJC6O75061 913 aa15.95■□□□□ 0.14
USE1-201ENST00000263897 CCKBRP32239 447 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms