RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 TBX18O95935 607 aa12.35□□□□□ -0.43
CHMP3-201ENST00000263856 LDLRP01130 860 aa12.35□□□□□ -0.43
CHMP3-201ENST00000263856 AXLP30530 894 aa12.35□□□□□ -0.43
CHMP3-201ENST00000263856 LEPRP48357 1165 aaKnown RBP12.35□□□□□ -0.43
CHMP3-201ENST00000263856 PSEN2P49810 448 aa12.35□□□□□ -0.43
CHMP3-201ENST00000263856 MTPNP58546 118 aa12.35□□□□□ -0.43
CHMP3-201ENST00000263856 ALFQ53S48 1182 aa12.35□□□□□ -0.43
CHMP3-201ENST00000263856 SPATA2LQ8IUW3 424 aaPredicted RBP12.35□□□□□ -0.43
CHMP3-201ENST00000263856 ADGRG5Q8IZF4 528 aa12.35□□□□□ -0.43
CHMP3-201ENST00000263856 FNDC5Q8NAU1 212 aa12.35□□□□□ -0.43
CHMP3-201ENST00000263856 SMYD1Q8NB12 490 aa12.35□□□□□ -0.43
CHMP3-201ENST00000263856 SEPT8Q92599 483 aa12.35□□□□□ -0.43
CHMP3-201ENST00000263856 ROPN1LQ96C74 230 aa12.35□□□□□ -0.43
CHMP3-201ENST00000263856 TSGA13Q96PP4 275 aa12.35□□□□□ -0.43
CHMP3-201ENST00000263856 SEMA3CQ99985 751 aa12.35□□□□□ -0.43
CHMP3-201ENST00000263856 RPF2Q9H7B2 306 aaKnown RBP12.35□□□□□ -0.43
CHMP3-201ENST00000263856 NMUR1Q9HB89 426 aa12.35□□□□□ -0.43
CHMP3-201ENST00000263856 FAM105AQ9NUU6 356 aa12.35□□□□□ -0.43
CHMP3-201ENST00000263856 EXD2Q9NVH0 621 aa12.35□□□□□ -0.43
CHMP3-201ENST00000263856 SMPD3Q9NY59 655 aaPredicted RBP12.35□□□□□ -0.43
CHMP3-201ENST00000263856 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.35□□□□□ -0.431e-6■■■■□ 22.1
CHMP3-201ENST00000263856 ST3GAL5Q9UNP4 418 aa12.35□□□□□ -0.43
CHMP3-201ENST00000263856 A0A0U1RQS6 177 aa12.34□□□□□ -0.43
CHMP3-201ENST00000263856 ARL5CA6NH57 179 aa12.34□□□□□ -0.43
CHMP3-201ENST00000263856 S1PR4O95977 384 aa12.34□□□□□ -0.43
CHMP3-201ENST00000263856 OCM2P0CE71 109 aa12.34□□□□□ -0.43
CHMP3-201ENST00000263856 OCMP0CE72 109 aaPredicted RBP12.34□□□□□ -0.43
CHMP3-201ENST00000263856 IST1P53990 364 aa12.34□□□□□ -0.43
CHMP3-201ENST00000263856 TUBA4AP68366 448 aa12.34□□□□□ -0.43
CHMP3-201ENST00000263856 UGT3A2Q3SY77 523 aa12.34□□□□□ -0.43
CHMP3-201ENST00000263856 SMYD5Q6GMV2 418 aa12.34□□□□□ -0.43
CHMP3-201ENST00000263856 TBPL2Q6SJ96 375 aa12.34□□□□□ -0.43
CHMP3-201ENST00000263856 CDYL2Q8N8U2 506 aa12.34□□□□□ -0.43
CHMP3-201ENST00000263856 SGCDQ92629 289 aa12.34□□□□□ -0.43
CHMP3-201ENST00000263856 PRM3Q9NNZ6 103 aa12.34□□□□□ -0.43
CHMP3-201ENST00000263856 AGPAT4Q9NRZ5 378 aa12.34□□□□□ -0.43
CHMP3-201ENST00000263856 SELENONQ9NZV5 590 aa12.34□□□□□ -0.43
CHMP3-201ENST00000263856 RNF181Q9P0P0 153 aa12.34□□□□□ -0.43
CHMP3-201ENST00000263856 CCL15-CCL14A0A0B4J2E2 113 aa12.34□□□□□ -0.43
CHMP3-201ENST00000263856 CCDC162PA2VCL2 907 aa12.34□□□□□ -0.43
CHMP3-201ENST00000263856 NPEPPSL1A6NEC2 478 aa12.34□□□□□ -0.43
CHMP3-201ENST00000263856 BTN3A1O00481 513 aa12.34□□□□□ -0.43
CHMP3-201ENST00000263856 CD3EAPO15446 510 aaKnown RBP12.34□□□□□ -0.43
CHMP3-201ENST00000263856 KATNA1O75449 491 aa12.34□□□□□ -0.43
CHMP3-201ENST00000263856 CD1DP15813 335 aa12.34□□□□□ -0.43
CHMP3-201ENST00000263856 IL7RP16871 459 aa12.34□□□□□ -0.43
CHMP3-201ENST00000263856 GPR15P49685 360 aa12.34□□□□□ -0.43
CHMP3-201ENST00000263856 RENBPP51606 427 aa12.34□□□□□ -0.43
CHMP3-201ENST00000263856 ATP6V0D1P61421 351 aa12.34□□□□□ -0.43
CHMP3-201ENST00000263856 CLCQ05315 142 aa12.34□□□□□ -0.43
CHMP3-201ENST00000263856 POLD3Q15054 466 aaPredicted RBP12.34□□□□□ -0.43
CHMP3-201ENST00000263856 CCL15Q16663 113 aa12.34□□□□□ -0.43
CHMP3-201ENST00000263856 DDR2Q16832 855 aa12.34□□□□□ -0.43
CHMP3-201ENST00000263856 RAB41Q5JT25 222 aa12.34□□□□□ -0.43
CHMP3-201ENST00000263856 TMTC4Q5T4D3 741 aa12.34□□□□□ -0.43
CHMP3-201ENST00000263856 RAP1GAP2Q684P5 730 aa12.34□□□□□ -0.43
CHMP3-201ENST00000263856 ELMSAN1Q6PJG2 1045 aa12.34□□□□□ -0.43
CHMP3-201ENST00000263856 SLC2A7Q6PXP3 512 aa12.34□□□□□ -0.43
CHMP3-201ENST00000263856 PAQR3Q6TCH7 311 aa12.34□□□□□ -0.43
CHMP3-201ENST00000263856 LYSMD3Q7Z3D4 306 aa12.34□□□□□ -0.43
CHMP3-201ENST00000263856 DDHD1Q8NEL9 900 aa12.34□□□□□ -0.43
CHMP3-201ENST00000263856 OR10T2Q8NGX3 314 aa12.34□□□□□ -0.43
CHMP3-201ENST00000263856 FBXO30Q8TB52 745 aa12.34□□□□□ -0.43
CHMP3-201ENST00000263856 RMDN1Q96DB5 314 aa12.34□□□□□ -0.43
CHMP3-201ENST00000263856 PGAP3Q96FM1 320 aaPredicted RBP12.34□□□□□ -0.43
CHMP3-201ENST00000263856 UBXN10Q96LJ8 280 aa12.34□□□□□ -0.43
CHMP3-201ENST00000263856 MUS81Q96NY9 551 aa12.34□□□□□ -0.43
CHMP3-201ENST00000263856 HOPXQ9BPY8 73 aaPredicted RBP12.34□□□□□ -0.43
CHMP3-201ENST00000263856 KATNBL1Q9H079 304 aa12.34□□□□□ -0.43
CHMP3-201ENST00000263856 VPS45Q9NRW7 570 aa12.34□□□□□ -0.43
CHMP3-201ENST00000263856 IFT80Q9P2H3 777 aaPredicted RBP12.34□□□□□ -0.43
CHMP3-201ENST00000263856 PTCH2Q9Y6C5 1203 aa12.34□□□□□ -0.43
CHMP3-201ENST00000263856 C17orf102A2RUQ5 167 aa12.34□□□□□ -0.43
CHMP3-201ENST00000263856 FXYD1O00168 92 aa12.34□□□□□ -0.43
CHMP3-201ENST00000263856 CDC7O00311 574 aa12.34□□□□□ -0.43
CHMP3-201ENST00000263856 GNGT2O14610 69 aa12.34□□□□□ -0.43
CHMP3-201ENST00000263856 ZSCAN9O15535 394 aaPredicted RBP12.34□□□□□ -0.43
CHMP3-201ENST00000263856 ODC1P11926 461 aa12.34□□□□□ -0.43
CHMP3-201ENST00000263856 MYF6P23409 242 aa12.34□□□□□ -0.43
CHMP3-201ENST00000263856 CBX3Q13185 183 aa12.34□□□□□ -0.43
CHMP3-201ENST00000263856 ITGADQ13349 1161 aa12.34□□□□□ -0.43
CHMP3-201ENST00000263856 LAPTM5Q13571 262 aa12.34□□□□□ -0.43
CHMP3-201ENST00000263856 SEMA3AQ14563 771 aa12.34□□□□□ -0.43
CHMP3-201ENST00000263856 AAK1Q2M2I8 961 aa12.34□□□□□ -0.43
CHMP3-201ENST00000263856 KIAA0408Q6ZU52 694 aa12.34□□□□□ -0.43
CHMP3-201ENST00000263856 PAF1Q8N7H5 531 aa12.34□□□□□ -0.43
CHMP3-201ENST00000263856 RTL3Q8N8U3 475 aaKnown RBP12.34□□□□□ -0.43
CHMP3-201ENST00000263856 FIG4Q92562 907 aa12.34□□□□□ -0.43
CHMP3-201ENST00000263856 GFM2Q969S9 779 aaKnown RBP12.34□□□□□ -0.43
CHMP3-201ENST00000263856 SLC25A51Q9H1U9 297 aa12.34□□□□□ -0.43
CHMP3-201ENST00000263856 HIPK3Q9H422 1215 aa12.34□□□□□ -0.43
CHMP3-201ENST00000263856 ARMC1Q9NVT9 282 aa12.34□□□□□ -0.43
CHMP3-201ENST00000263856 SARDHQ9UL12 918 aa12.34□□□□□ -0.43
CHMP3-201ENST00000263856 KCNH4Q9UQ05 1017 aa12.34□□□□□ -0.43
CHMP3-201ENST00000263856 GMEB1Q9Y692 573 aa12.34□□□□□ -0.43
CHMP3-201ENST00000263856 ZSWIM8A7E2V4 1837 aa12.34□□□□□ -0.43
CHMP3-201ENST00000263856 ZBBXA8MT70 800 aa12.33□□□□□ -0.44
CHMP3-201ENST00000263856 NOBOXO60393 691 aa12.33□□□□□ -0.44
CHMP3-201ENST00000263856 SNX2O60749 519 aa12.33□□□□□ -0.44
CHMP3-201ENST00000263856 RSL1D1O76021 490 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms