RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 GON4LQ3T8J9 2241 aa9.69□□□□□ -0.86
SNRNP40-201ENST00000263694 TBC1D3DA0A087WVF3 549 aa9.69□□□□□ -0.86
SNRNP40-201ENST00000263694 TBC1D3IA0A087WXS9 549 aa9.69□□□□□ -0.86
SNRNP40-201ENST00000263694 TBC1D3EA0A087X179 549 aa9.69□□□□□ -0.86
SNRNP40-201ENST00000263694 TBC1D3KA0A087X1G2 549 aa9.69□□□□□ -0.86
SNRNP40-201ENST00000263694 GLYATL1P3A0A0U1RQE8 302 aa9.69□□□□□ -0.86
SNRNP40-201ENST00000263694 HMX2A2RU54 273 aa9.69□□□□□ -0.86
SNRNP40-201ENST00000263694 TBC1D3FA6NER0 549 aaPredicted RBP9.69□□□□□ -0.86
SNRNP40-201ENST00000263694 TBC1D3LB9A6J9 549 aa9.69□□□□□ -0.86
SNRNP40-201ENST00000263694 ATP8B1O43520 1251 aa9.69□□□□□ -0.86
SNRNP40-201ENST00000263694 DCXO43602 365 aa9.69□□□□□ -0.86
SNRNP40-201ENST00000263694 ATG13O75143 517 aa9.69□□□□□ -0.86
SNRNP40-201ENST00000263694 TCEA3O75764 348 aa9.69□□□□□ -0.86
SNRNP40-201ENST00000263694 SRP72O76094 671 aaKnown RBP9.69□□□□□ -0.86
SNRNP40-201ENST00000263694 RECQL5O94762 991 aaPredicted RBP9.69□□□□□ -0.86
SNRNP40-201ENST00000263694 PRAMEF1O95521 474 aa9.69□□□□□ -0.86
SNRNP40-201ENST00000263694 S1PR4O95977 384 aa9.69□□□□□ -0.86
SNRNP40-201ENST00000263694 INHBAP08476 426 aa9.69□□□□□ -0.86
SNRNP40-201ENST00000263694 TBC1D3HP0C7X1 549 aa9.69□□□□□ -0.86
SNRNP40-201ENST00000263694 NFKBIAP25963 317 aa9.69□□□□□ -0.86
SNRNP40-201ENST00000263694 MAT2AP31153 395 aaKnown RBP9.69□□□□□ -0.86
SNRNP40-201ENST00000263694 SPAM1P38567 509 aa9.69□□□□□ -0.86
SNRNP40-201ENST00000263694 ADPRHP54922 357 aa9.69□□□□□ -0.86
SNRNP40-201ENST00000263694 EIF3BP55884 814 aaKnown RBP9.69□□□□□ -0.86
SNRNP40-201ENST00000263694 FGL2Q14314 439 aa9.69□□□□□ -0.86
SNRNP40-201ENST00000263694 TTC31Q49AM3 519 aaPredicted RBP9.69□□□□□ -0.86
SNRNP40-201ENST00000263694 ATP13A5Q4VNC0 1218 aa9.69□□□□□ -0.86
SNRNP40-201ENST00000263694 FASTKD1Q53R41 847 aaKnown RBP9.69□□□□□ -0.86
SNRNP40-201ENST00000263694 TTMPQ5BVD1 217 aa9.69□□□□□ -0.86
SNRNP40-201ENST00000263694 ARMC3Q5W041 872 aa9.69□□□□□ -0.86
SNRNP40-201ENST00000263694 KCTD16Q68DU8 428 aa9.69□□□□□ -0.86
SNRNP40-201ENST00000263694 TBC1D3GQ6DHY5 549 aa9.69□□□□□ -0.86
SNRNP40-201ENST00000263694 TBC1D3CQ6IPX1 549 aa9.69□□□□□ -0.86
SNRNP40-201ENST00000263694 CNSTQ6PJW8 725 aa9.69□□□□□ -0.86
SNRNP40-201ENST00000263694 ADGRD1Q6QNK2 874 aa9.69□□□□□ -0.86
SNRNP40-201ENST00000263694 AFTPHQ6ULP2 937 aa9.69□□□□□ -0.86
SNRNP40-201ENST00000263694 PACS1Q6VY07 963 aa9.69□□□□□ -0.86
SNRNP40-201ENST00000263694 SLC26A11Q86WA9 606 aa9.69□□□□□ -0.86
SNRNP40-201ENST00000263694 CILP2Q8IUL8 1156 aa9.69□□□□□ -0.86
SNRNP40-201ENST00000263694 CNTN4Q8IWV2 1026 aa9.69□□□□□ -0.86
SNRNP40-201ENST00000263694 TBC1D3Q8IZP1 549 aaPredicted RBP9.69□□□□□ -0.86
SNRNP40-201ENST00000263694 FAM160A2Q8N612 972 aaPredicted RBP9.69□□□□□ -0.86
SNRNP40-201ENST00000263694 ZNF398Q8TD17 642 aa9.69□□□□□ -0.86
SNRNP40-201ENST00000263694 CDKL2Q92772 493 aa9.69□□□□□ -0.86
SNRNP40-201ENST00000263694 PEX13Q92968 403 aa9.69□□□□□ -0.86
SNRNP40-201ENST00000263694 RAB7BQ96AH8 199 aa9.69□□□□□ -0.86
SNRNP40-201ENST00000263694 TMEM109Q9BVC6 243 aa9.69□□□□□ -0.86
SNRNP40-201ENST00000263694 SPATA16Q9BXB7 569 aa9.69□□□□□ -0.86
SNRNP40-201ENST00000263694 ROPN1BQ9BZX4 212 aaPredicted RBP9.69□□□□□ -0.86
SNRNP40-201ENST00000263694 FAM83DQ9H4H8 585 aa9.69□□□□□ -0.86
SNRNP40-201ENST00000263694 ASB8Q9H765 288 aa9.69□□□□□ -0.86
SNRNP40-201ENST00000263694 ROPN1Q9HAT0 212 aaPredicted RBP9.69□□□□□ -0.86
SNRNP40-201ENST00000263694 TMBIM4Q9HC24 238 aa9.69□□□□□ -0.86
SNRNP40-201ENST00000263694 EURLQ9NYK6 297 aa9.69□□□□□ -0.86
SNRNP40-201ENST00000263694 FBXO5Q9UKT4 447 aa9.69□□□□□ -0.86
SNRNP40-201ENST00000263694 TMPRSS11EQ9UL52 423 aa9.69□□□□□ -0.86
SNRNP40-201ENST00000263694 NCKAP1Q9Y2A7 1128 aa9.69□□□□□ -0.86
SNRNP40-201ENST00000263694 MTO1Q9Y2Z2 717 aaKnown RBP9.69□□□□□ -0.86
SNRNP40-201ENST00000263694 SLC30A1Q9Y6M5 507 aa9.69□□□□□ -0.86
SNRNP40-201ENST00000263694 ZDBF2Q9HCK1 2354 aa9.69□□□□□ -0.86
SNRNP40-201ENST00000263694 A0A0C4DFX4 3053 aa9.68□□□□□ -0.86
SNRNP40-201ENST00000263694 A0A1W2PPM1 405 aa9.68□□□□□ -0.86
SNRNP40-201ENST00000263694 A0A1W2PQU0 124 aa9.68□□□□□ -0.86
SNRNP40-201ENST00000263694 H3BQF6 201 aa9.68□□□□□ -0.86
SNRNP40-201ENST00000263694 H7C0S8 307 aa9.68□□□□□ -0.86
SNRNP40-201ENST00000263694 K7ESM1 405 aa9.68□□□□□ -0.86
SNRNP40-201ENST00000263694 WNT9AO14904 365 aa9.68□□□□□ -0.86
SNRNP40-201ENST00000263694 TSPAN6O43657 245 aa9.68□□□□□ -0.86
SNRNP40-201ENST00000263694 PLRG1O43660 514 aaKnown RBP9.68□□□□□ -0.86
SNRNP40-201ENST00000263694 AP1G1O43747 822 aa9.68□□□□□ -0.86
SNRNP40-201ENST00000263694 OR1I1O60431 355 aa9.68□□□□□ -0.86
SNRNP40-201ENST00000263694 RNGTTO60942 597 aaKnown RBP9.68□□□□□ -0.86
SNRNP40-201ENST00000263694 MYZAPP0CAP1 466 aa9.68□□□□□ -0.86
SNRNP40-201ENST00000263694 GMPRP36959 345 aa9.68□□□□□ -0.86
SNRNP40-201ENST00000263694 SUOXP51687 545 aa9.68□□□□□ -0.86
SNRNP40-201ENST00000263694 PPP2CBP62714 309 aa9.68□□□□□ -0.86
SNRNP40-201ENST00000263694 PPP2CAP67775 309 aa9.68□□□□□ -0.86
SNRNP40-201ENST00000263694 ZBTB16Q05516 673 aa9.68□□□□□ -0.86
SNRNP40-201ENST00000263694 DMWDQ09019 674 aa9.68□□□□□ -0.86
SNRNP40-201ENST00000263694 ZNF648Q5T619 568 aaPredicted RBP9.68□□□□□ -0.86
SNRNP40-201ENST00000263694 MROH9Q5TGP6 573 aa9.68□□□□□ -0.86
SNRNP40-201ENST00000263694 SPEM1Q8N4L4 309 aa9.68□□□□□ -0.86
SNRNP40-201ENST00000263694 PLA2G15Q8NCC3 412 aa9.68□□□□□ -0.86
SNRNP40-201ENST00000263694 C2CD4AQ8NCU7 369 aaPredicted RBP9.68□□□□□ -0.86
SNRNP40-201ENST00000263694 FUBP1Q96AE4 644 aaKnown RBP9.68□□□□□ -0.86
SNRNP40-201ENST00000263694 FAM131CQ96AQ9 280 aa9.68□□□□□ -0.86
SNRNP40-201ENST00000263694 DTD2Q96FN9 168 aa9.68□□□□□ -0.86
SNRNP40-201ENST00000263694 KLF6Q99612 283 aaPredicted RBP9.68□□□□□ -0.86
SNRNP40-201ENST00000263694 SH3GL2Q99962 352 aa9.68□□□□□ -0.86
SNRNP40-201ENST00000263694 FAM167BQ9BTA0 163 aa9.68□□□□□ -0.86
SNRNP40-201ENST00000263694 ITM2CQ9NQX7 267 aa9.68□□□□□ -0.86
SNRNP40-201ENST00000263694 DLGAP2Q9P1A6 1054 aa9.68□□□□□ -0.86
SNRNP40-201ENST00000263694 PSMC3IPQ9P2W1 217 aaPredicted RBP9.68□□□□□ -0.86
SNRNP40-201ENST00000263694 SLC24A2Q9UI40 661 aa9.68□□□□□ -0.86
SNRNP40-201ENST00000263694 CRYL1Q9Y2S2 319 aa9.68□□□□□ -0.86
SNRNP40-201ENST00000263694 IKBKGQ9Y6K9 419 aa9.68□□□□□ -0.86
SNRNP40-201ENST00000263694 PIKFYVEQ9Y2I7 2098 aa9.68□□□□□ -0.86
SNRNP40-201ENST00000263694 FADS2P1A8MWK0 482 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 TRIM49D1C9J1S8 452 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 H0Y858 1186 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms