RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 SLITRK4Q8IW52 837 aa12.18□□□□□ -0.46
TRAF4-202ENST00000262396 PIH1D2Q8WWB5 315 aa12.18□□□□□ -0.46
TRAF4-202ENST00000262396 SH3KBP1Q96B97 665 aa12.18□□□□□ -0.46
TRAF4-202ENST00000262396 NSMCE3Q96MG7 304 aa12.18□□□□□ -0.46
TRAF4-202ENST00000262396 MCCC1Q96RQ3 725 aaPredicted RBP12.18□□□□□ -0.46
TRAF4-202ENST00000262396 RIOK2Q9BVS4 552 aaKnown RBP12.18□□□□□ -0.46
TRAF4-202ENST00000262396 ADGRE3Q9BY15 652 aa12.18□□□□□ -0.46
TRAF4-202ENST00000262396 SEMA4CQ9C0C4 833 aa12.18□□□□□ -0.46
TRAF4-202ENST00000262396 PCDH9Q9HC56 1237 aa12.18□□□□□ -0.46
TRAF4-202ENST00000262396 FOXJ2Q9P0K8 574 aa12.18□□□□□ -0.46
TRAF4-202ENST00000262396 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.18□□□□□ -0.465e-8■■■■□ 23.6
TRAF4-202ENST00000262396 BPTFQ12830 3046 aa12.17□□□□□ -0.46
TRAF4-202ENST00000262396 A0A087X0T9 212 aa12.17□□□□□ -0.46
TRAF4-202ENST00000262396 IGHV5-10-1A0A0J9YXX1 117 aa12.17□□□□□ -0.46
TRAF4-202ENST00000262396 A0A0U1RQS6 177 aa12.17□□□□□ -0.46
TRAF4-202ENST00000262396 EFCAB7A8K855 629 aa12.17□□□□□ -0.46
TRAF4-202ENST00000262396 A8MU76 341 aa12.17□□□□□ -0.46
TRAF4-202ENST00000262396 CLDN7O95471 211 aa12.17□□□□□ -0.46
TRAF4-202ENST00000262396 CD48P09326 243 aa12.17□□□□□ -0.46
TRAF4-202ENST00000262396 FAM228BP0C875 321 aa12.17□□□□□ -0.46
TRAF4-202ENST00000262396 CCL4P13236 92 aa12.17□□□□□ -0.46
TRAF4-202ENST00000262396 CCNCP24863 283 aa12.17□□□□□ -0.46
TRAF4-202ENST00000262396 CD1CP29017 333 aa12.17□□□□□ -0.46
TRAF4-202ENST00000262396 KCNC4Q03721 635 aa12.17□□□□□ -0.46
TRAF4-202ENST00000262396 GALNT2Q10471 571 aa12.17□□□□□ -0.46
TRAF4-202ENST00000262396 NFATC2Q13469 925 aa12.17□□□□□ -0.46
TRAF4-202ENST00000262396 DPYSL3Q14195 570 aa12.17□□□□□ -0.46
TRAF4-202ENST00000262396 DCAF12Q5T6F0 453 aa12.17□□□□□ -0.46
TRAF4-202ENST00000262396 ZNF765Q7L2R6 523 aa12.17□□□□□ -0.46
TRAF4-202ENST00000262396 TECPR1Q7Z6L1 1165 aa12.17□□□□□ -0.46
TRAF4-202ENST00000262396 SLC9B2Q86UD5 537 aa12.17□□□□□ -0.46
TRAF4-202ENST00000262396 ZNF761Q86XN6 746 aaPredicted RBP12.17□□□□□ -0.46
TRAF4-202ENST00000262396 TRIM48Q8IWZ4 208 aa12.17□□□□□ -0.46
TRAF4-202ENST00000262396 CCDC13Q8IYE1 715 aa12.17□□□□□ -0.46
TRAF4-202ENST00000262396 TEX26Q8N6G2 289 aa12.17□□□□□ -0.46
TRAF4-202ENST00000262396 OR4D9Q8NGE8 314 aa12.17□□□□□ -0.46
TRAF4-202ENST00000262396 NCSTNQ92542 709 aa12.17□□□□□ -0.46
TRAF4-202ENST00000262396 SPOCK2Q92563 424 aa12.17□□□□□ -0.46
TRAF4-202ENST00000262396 ART4Q93070 314 aa12.17□□□□□ -0.46
TRAF4-202ENST00000262396 KIAA1143Q96AT1 154 aaPredicted RBP12.17□□□□□ -0.46
TRAF4-202ENST00000262396 ZNF670Q9BS34 389 aa12.17□□□□□ -0.46
TRAF4-202ENST00000262396 MLPHQ9BV36 600 aaPredicted RBP12.17□□□□□ -0.46
TRAF4-202ENST00000262396 ASPSCR1Q9BZE9 553 aa12.17□□□□□ -0.46
TRAF4-202ENST00000262396 OSGEPL1Q9H4B0 414 aa12.17□□□□□ -0.46
TRAF4-202ENST00000262396 FAM83DQ9H4H8 585 aa12.17□□□□□ -0.46
TRAF4-202ENST00000262396 CBX8Q9HC52 389 aa12.17□□□□□ -0.46
TRAF4-202ENST00000262396 UVRAGQ9P2Y5 699 aa12.17□□□□□ -0.46
TRAF4-202ENST00000262396 AMACRQ9UHK6 382 aa12.17□□□□□ -0.46
TRAF4-202ENST00000262396 ACSL6Q9UKU0 697 aa12.17□□□□□ -0.46
TRAF4-202ENST00000262396 CAPN11Q9UMQ6 739 aa12.17□□□□□ -0.46
TRAF4-202ENST00000262396 PLEKHM1Q9Y4G2 1056 aa12.17□□□□□ -0.46
TRAF4-202ENST00000262396 HEY1Q9Y5J3 304 aa12.17□□□□□ -0.46
TRAF4-202ENST00000262396 ANKRD36A6QL64 1941 aa12.16□□□□□ -0.46
TRAF4-202ENST00000262396 C9orf172C9J069 976 aa12.16□□□□□ -0.46
TRAF4-202ENST00000262396 PPM1DO15297 605 aa12.16□□□□□ -0.46
TRAF4-202ENST00000262396 PROSCO94903 275 aa12.16□□□□□ -0.46
TRAF4-202ENST00000262396 JCHAINP01591 159 aa12.16□□□□□ -0.46
TRAF4-202ENST00000262396 ATP1A1P05023 1023 aaKnown RBP12.16□□□□□ -0.46
TRAF4-202ENST00000262396 ITGB2P05107 769 aa12.16□□□□□ -0.46
TRAF4-202ENST00000262396 ACP5P13686 325 aa12.16□□□□□ -0.46
TRAF4-202ENST00000262396 CD86P42081 329 aa12.16□□□□□ -0.46
TRAF4-202ENST00000262396 STC1P52823 247 aa12.16□□□□□ -0.46
TRAF4-202ENST00000262396 LIMK2P53671 638 aa12.16□□□□□ -0.46
TRAF4-202ENST00000262396 RAB15P59190 212 aa12.16□□□□□ -0.46
TRAF4-202ENST00000262396 RPL26P61254 145 aaKnown RBP12.16□□□□□ -0.46
TRAF4-202ENST00000262396 HHEXQ03014 270 aa12.16□□□□□ -0.46
TRAF4-202ENST00000262396 PTSQ03393 145 aa12.16□□□□□ -0.46
TRAF4-202ENST00000262396 AP1B1Q10567 949 aa12.16□□□□□ -0.46
TRAF4-202ENST00000262396 MESDQ14696 234 aa12.16□□□□□ -0.46
TRAF4-202ENST00000262396 IQCB1Q15051 598 aa12.16□□□□□ -0.46
TRAF4-202ENST00000262396 PAFAH1B3Q15102 231 aaKnown RBP12.16□□□□□ -0.46
TRAF4-202ENST00000262396 ATP13A4Q4VNC1 1196 aa12.16□□□□□ -0.46
TRAF4-202ENST00000262396 PYCR3Q53H96 274 aa12.16□□□□□ -0.46
TRAF4-202ENST00000262396 HGSNATQ68CP4 663 aa12.16□□□□□ -0.46
TRAF4-202ENST00000262396 NCBP2-AS2Q69YL0 99 aa12.16□□□□□ -0.46
TRAF4-202ENST00000262396 TMEM71Q6P5X7 295 aa12.16□□□□□ -0.46
TRAF4-202ENST00000262396 RFLNAQ6ZTI6 216 aa12.16□□□□□ -0.46
TRAF4-202ENST00000262396 TMPRSS9Q7Z410 1059 aa12.16□□□□□ -0.46
TRAF4-202ENST00000262396 KDELC2Q7Z4H8 507 aa12.16□□□□□ -0.46
TRAF4-202ENST00000262396 PHYKPLQ8IUZ5 450 aa12.16□□□□□ -0.46
TRAF4-202ENST00000262396 NAGSQ8N159 534 aa12.16□□□□□ -0.46
TRAF4-202ENST00000262396 SPATA16Q9BXB7 569 aa12.16□□□□□ -0.46
TRAF4-202ENST00000262396 TDRD1Q9BXT4 1180 aaKnown RBP12.16□□□□□ -0.46
TRAF4-202ENST00000262396 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.16□□□□□ -0.46
TRAF4-202ENST00000262396 IFNKQ9P0W0 207 aa12.16□□□□□ -0.46
TRAF4-202ENST00000262396 KLHL3Q9UH77 587 aa12.16□□□□□ -0.46
TRAF4-202ENST00000262396 RPL26L1Q9UNX3 145 aaKnown RBP12.16□□□□□ -0.46
TRAF4-202ENST00000262396 PPIL1Q9Y3C6 166 aa12.16□□□□□ -0.46
TRAF4-202ENST00000262396 PRKAB1Q9Y478 270 aa12.16□□□□□ -0.46
TRAF4-202ENST00000262396 PCDHGA4Q9Y5G9 962 aa12.16□□□□□ -0.46
TRAF4-202ENST00000262396 IGHV1OR21-1A0A087WYE8 117 aa12.15□□□□□ -0.46
TRAF4-202ENST00000262396 LRRD1A4D1F6 860 aa12.15□□□□□ -0.46
TRAF4-202ENST00000262396 PYCARD-AS1I3L0S3 204 aa12.15□□□□□ -0.46
TRAF4-202ENST00000262396 AKR1B10O60218 316 aa12.15□□□□□ -0.46
TRAF4-202ENST00000262396 MTA2O94776 668 aa12.15□□□□□ -0.46
TRAF4-202ENST00000262396 FUCA1P04066 466 aa12.15□□□□□ -0.46
TRAF4-202ENST00000262396 HLA-DQB2P05538 268 aa12.15□□□□□ -0.46
TRAF4-202ENST00000262396 FAM87AP0C7U9 286 aa12.15□□□□□ -0.46
TRAF4-202ENST00000262396 TNNT1P13805 278 aa12.15□□□□□ -0.46
TRAF4-202ENST00000262396 SRSF6Q13247 344 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms