RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 EEF1DP29692 281 aaKnown RBP19.28■□□□□ 0.68
SCARB1-201ENST00000261693 MRPS6P82932 125 aaKnown RBP19.28■□□□□ 0.68
SCARB1-201ENST00000261693 NFYCQ13952 458 aa19.28■□□□□ 0.68
SCARB1-201ENST00000261693 GALNT3Q14435 633 aa19.28■□□□□ 0.68
SCARB1-201ENST00000261693 PLCL1Q15111 1095 aa19.28■□□□□ 0.68
SCARB1-201ENST00000261693 CCL14Q16627 93 aa19.28■□□□□ 0.68
SCARB1-201ENST00000261693 CIR1Q86X95 450 aaPredicted RBP19.28■□□□□ 0.68
SCARB1-201ENST00000261693 TNIP2Q8NFZ5 429 aa19.28■□□□□ 0.68
SCARB1-201ENST00000261693 OSBPL6Q9BZF3 934 aa19.28■□□□□ 0.68
SCARB1-201ENST00000261693 CXorf21Q9HAI6 301 aa19.28■□□□□ 0.68
SCARB1-201ENST00000261693 MYO16Q9Y6X6 1858 aa19.28■□□□□ 0.68
SCARB1-201ENST00000261693 CCDC162PA2VCL2 907 aa19.28■□□□□ 0.68
SCARB1-201ENST00000261693 NCF1BA6NI72 391 aaPredicted RBP19.28■□□□□ 0.68
SCARB1-201ENST00000261693 NCF1CA8MVU1 366 aaPredicted RBP19.28■□□□□ 0.68
SCARB1-201ENST00000261693 M0QZ92 97 aa19.28■□□□□ 0.68
SCARB1-201ENST00000261693 CRCPO75575 148 aa19.28■□□□□ 0.68
SCARB1-201ENST00000261693 ATXN1LP0C7T5 689 aaKnown RBP19.28■□□□□ 0.68
SCARB1-201ENST00000261693 NCF1P14598 390 aaPredicted RBP19.28■□□□□ 0.68
SCARB1-201ENST00000261693 RPL9P32969 192 aaKnown RBP19.28■□□□□ 0.68
SCARB1-201ENST00000261693 HTR7P34969 479 aa19.28■□□□□ 0.68
SCARB1-201ENST00000261693 NUP107P57740 925 aa19.28■□□□□ 0.68
SCARB1-201ENST00000261693 BNIP2Q12982 314 aa19.28■□□□□ 0.68
SCARB1-201ENST00000261693 IRAK1BP1Q5VVH5 260 aa19.28■□□□□ 0.68
SCARB1-201ENST00000261693 GPR107Q5VW38 600 aa19.28■□□□□ 0.68
SCARB1-201ENST00000261693 BLOC1S3Q6QNY0 202 aa19.28■□□□□ 0.68
SCARB1-201ENST00000261693 SPATA2LQ8IUW3 424 aaPredicted RBP19.28■□□□□ 0.68
SCARB1-201ENST00000261693 MIPOL1Q8TD10 442 aa19.28■□□□□ 0.68
SCARB1-201ENST00000261693 SEPHS2Q99611 448 aa19.28■□□□□ 0.68
SCARB1-201ENST00000261693 ALG2Q9H553 416 aa19.28■□□□□ 0.68
SCARB1-201ENST00000261693 FAM50BQ9Y247 325 aa19.28■□□□□ 0.68
SCARB1-201ENST00000261693 PCDHA9Q9Y5H5 950 aa19.28■□□□□ 0.68
SCARB1-201ENST00000261693 FADS3Q9Y5Q0 445 aa19.28■□□□□ 0.68
SCARB1-201ENST00000261693 COL4A4P53420 1690 aaPredicted RBP19.28■□□□□ 0.68
SCARB1-201ENST00000261693 SLC26A3P40879 764 aa19.27■□□□□ 0.68
SCARB1-201ENST00000261693 GSK3BP49841 420 aa19.27■□□□□ 0.68
SCARB1-201ENST00000261693 CPT1AP50416 773 aa19.27■□□□□ 0.68
SCARB1-201ENST00000261693 SCML4Q8N228 414 aa19.27■□□□□ 0.68
SCARB1-201ENST00000261693 TRPV3Q8NET8 790 aa19.27■□□□□ 0.68
SCARB1-201ENST00000261693 FNDC8Q8TC99 324 aa19.27■□□□□ 0.68
SCARB1-201ENST00000261693 TMEM125Q96AQ2 219 aa19.27■□□□□ 0.68
SCARB1-201ENST00000261693 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.27■□□□□ 0.684e-8■□□□□ 10.2
SCARB1-201ENST00000261693 TNFRSF10BO14763 440 aa19.27■□□□□ 0.68
SCARB1-201ENST00000261693 GIPC1O14908 333 aa19.27■□□□□ 0.68
SCARB1-201ENST00000261693 RASAL1O95294 804 aa19.27■□□□□ 0.68
SCARB1-201ENST00000261693 ZNF865P0CJ78 1059 aaPredicted RBP19.27■□□□□ 0.68
SCARB1-201ENST00000261693 VARSP26640 1264 aaKnown RBP19.27■□□□□ 0.68
SCARB1-201ENST00000261693 PRDX3P30048 256 aaKnown RBP19.27■□□□□ 0.68
SCARB1-201ENST00000261693 ANKDD1AQ495B1 522 aa19.27■□□□□ 0.68
SCARB1-201ENST00000261693 PAGE3Q5JUK9 113 aa19.27■□□□□ 0.68
SCARB1-201ENST00000261693 CD300LGQ6UXG3 332 aa19.27■□□□□ 0.68
SCARB1-201ENST00000261693 GALNT7Q86SF2 657 aa19.27■□□□□ 0.68
SCARB1-201ENST00000261693 ARRDC2Q8TBH0 407 aa19.27■□□□□ 0.68
SCARB1-201ENST00000261693 KCTD14Q9BQ13 255 aaPredicted RBP19.27■□□□□ 0.68
SCARB1-201ENST00000261693 SLC52A3Q9NQ40 469 aa19.27■□□□□ 0.68
SCARB1-201ENST00000261693 TUBA8Q9NY65 449 aaPredicted RBP19.27■□□□□ 0.68
SCARB1-201ENST00000261693 IKZF3Q9UKT9 509 aa19.27■□□□□ 0.68
SCARB1-201ENST00000261693 UBA6A0AVT1 1052 aaPredicted RBP19.26■□□□□ 0.67
SCARB1-201ENST00000261693 ASPDHA6ND91 283 aa19.26■□□□□ 0.67
SCARB1-201ENST00000261693 KPNA6O60684 536 aa19.26■□□□□ 0.67
SCARB1-201ENST00000261693 SNAP29O95721 258 aa19.26■□□□□ 0.67
SCARB1-201ENST00000261693 CLCQ05315 142 aa19.26■□□□□ 0.67
SCARB1-201ENST00000261693 LIPEQ05469 1076 aa19.26■□□□□ 0.67
SCARB1-201ENST00000261693 ELMSAN1Q6PJG2 1045 aa19.26■□□□□ 0.67
SCARB1-201ENST00000261693 BEND5Q7L4P6 421 aa19.26■□□□□ 0.67
SCARB1-201ENST00000261693 LYSMD3Q7Z3D4 306 aa19.26■□□□□ 0.67
SCARB1-201ENST00000261693 LRRC49Q8IUZ0 686 aa19.26■□□□□ 0.67
SCARB1-201ENST00000261693 DCP1BQ8IZD4 617 aaKnown RBP19.26■□□□□ 0.67
SCARB1-201ENST00000261693 UMODL1-AS1Q8N2C9 162 aa19.26■□□□□ 0.67
SCARB1-201ENST00000261693 SEPT8Q92599 483 aa19.26■□□□□ 0.67
SCARB1-201ENST00000261693 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.26■□□□□ 0.676e-7■■■■□ 24.2
SCARB1-201ENST00000261693 ATOH8Q96SQ7 321 aa19.26■□□□□ 0.67
SCARB1-201ENST00000261693 SEMA3CQ99985 751 aa19.26■□□□□ 0.67
SCARB1-201ENST00000261693 C1orf50Q9BV19 199 aa19.26■□□□□ 0.67
SCARB1-201ENST00000261693 NAA50Q9GZZ1 169 aaKnown RBP19.26■□□□□ 0.67
SCARB1-201ENST00000261693 AP5M1Q9H0R1 490 aa19.26■□□□□ 0.67
SCARB1-201ENST00000261693 NLRC5Q86WI3 1866 aa19.26■□□□□ 0.67
SCARB1-201ENST00000261693 HNRNPCP07910 306 aaKnown RBP eCLIP19.26■□□□□ 0.67
SCARB1-201ENST00000261693 TFPTP0C1Z6 253 aa19.26■□□□□ 0.67
SCARB1-201ENST00000261693 MAPK10P53779 464 aa19.26■□□□□ 0.67
SCARB1-201ENST00000261693 ZBTB46Q86UZ6 589 aa19.26■□□□□ 0.67
SCARB1-201ENST00000261693 DCBLD1Q8N8Z6 715 aa19.26■□□□□ 0.67
SCARB1-201ENST00000261693 LZICQ8WZA0 190 aa19.26■□□□□ 0.67
SCARB1-201ENST00000261693 VPS50Q96JG6 964 aa19.26■□□□□ 0.67
SCARB1-201ENST00000261693 POLR1BQ9H9Y6 1135 aa19.26■□□□□ 0.67
SCARB1-201ENST00000261693 ABI2Q9NYB9 513 aaPredicted RBP19.26■□□□□ 0.67
SCARB1-201ENST00000261693 TRIM64CA6NLI5 447 aa19.25■□□□□ 0.67
SCARB1-201ENST00000261693 IDO1P14902 403 aa19.25■□□□□ 0.67
SCARB1-201ENST00000261693 GPR15P49685 360 aa19.25■□□□□ 0.67
SCARB1-201ENST00000261693 UFM1P61960 85 aa19.25■□□□□ 0.67
SCARB1-201ENST00000261693 TSPY1Q01534 308 aa19.25■□□□□ 0.67
SCARB1-201ENST00000261693 RAB39AQ14964 217 aa19.25■□□□□ 0.67
SCARB1-201ENST00000261693 NEDD8Q15843 81 aa19.25■□□□□ 0.67
SCARB1-201ENST00000261693 MS4A13Q5J8X5 152 aa19.25■□□□□ 0.67
SCARB1-201ENST00000261693 HABP4Q5JVS0 413 aaKnown RBP19.25■□□□□ 0.67
SCARB1-201ENST00000261693 TMTC4Q5T4D3 741 aa19.25■□□□□ 0.67
SCARB1-201ENST00000261693 DHRS4L2Q6PKH6 230 aa19.25■□□□□ 0.67
SCARB1-201ENST00000261693 TMEM26Q6ZUK4 368 aa19.25■□□□□ 0.67
SCARB1-201ENST00000261693 SPRED1Q7Z699 444 aa19.25■□□□□ 0.67
SCARB1-201ENST00000261693 SERPINB11Q96P15 392 aa19.25■□□□□ 0.67
SCARB1-201ENST00000261693 ZYG11BQ9C0D3 744 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms