RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 VPS33BQ9H267 617 aa12.96□□□□□ -0.34
TMEM260-201ENST00000261556 ATP13A2Q9NQ11 1180 aa12.96□□□□□ -0.34
TMEM260-201ENST00000261556 ZNF358Q9NW07 568 aa12.96□□□□□ -0.34
TMEM260-201ENST00000261556 CFL2Q9Y281 166 aa12.96□□□□□ -0.34
TMEM260-201ENST00000261556 DNMT3AQ9Y6K1 912 aaPredicted RBP12.96□□□□□ -0.34
TMEM260-201ENST00000261556 ZNF701M0R085 212 aaPredicted RBP12.95□□□□□ -0.34
TMEM260-201ENST00000261556 SLC22A1O15245 554 aa12.95□□□□□ -0.34
TMEM260-201ENST00000261556 FKBP9O95302 570 aa12.95□□□□□ -0.34
TMEM260-201ENST00000261556 NCK1P16333 377 aa12.95□□□□□ -0.34
TMEM260-201ENST00000261556 NUMBP49757 651 aa12.95□□□□□ -0.34
TMEM260-201ENST00000261556 CHRNEQ04844 493 aa12.95□□□□□ -0.34
TMEM260-201ENST00000261556 SWI5Q1ZZU3 235 aa12.95□□□□□ -0.34
TMEM260-201ENST00000261556 CPT1BQ92523 772 aa12.95□□□□□ -0.34
TMEM260-201ENST00000261556 TNKS2Q9H2K2 1166 aa12.95□□□□□ -0.34
TMEM260-201ENST00000261556 RSAD1Q9HA92 442 aa12.95□□□□□ -0.34
TMEM260-201ENST00000261556 RANGRFQ9HD47 186 aaPredicted RBP12.95□□□□□ -0.34
TMEM260-201ENST00000261556 RASSF1Q9NS23 344 aa12.95□□□□□ -0.34
TMEM260-201ENST00000261556 ERVK13-1Q9NX77 482 aa12.95□□□□□ -0.34
TMEM260-201ENST00000261556 NUP50Q9UKX7 468 aa12.95□□□□□ -0.34
TMEM260-201ENST00000261556 MAN2B2Q9Y2E5 1009 aa12.95□□□□□ -0.34
TMEM260-201ENST00000261556 SH3D21A4FU49 640 aa12.95□□□□□ -0.34
TMEM260-201ENST00000261556 FADS2P1A8MWK0 482 aa12.95□□□□□ -0.34
TMEM260-201ENST00000261556 SGTAO43765 313 aa12.95□□□□□ -0.34
TMEM260-201ENST00000261556 AIREO43918 545 aa12.95□□□□□ -0.34
TMEM260-201ENST00000261556 GLDCP23378 1020 aa12.95□□□□□ -0.34
TMEM260-201ENST00000261556 IVDP26440 423 aa12.95□□□□□ -0.34
TMEM260-201ENST00000261556 SIM2Q14190 667 aaPredicted RBP12.95□□□□□ -0.34
TMEM260-201ENST00000261556 POU4F3Q15319 338 aa12.95□□□□□ -0.34
TMEM260-201ENST00000261556 DHRS4L2Q6PKH6 230 aa12.95□□□□□ -0.34
TMEM260-201ENST00000261556 MCOLN2Q8IZK6 566 aa12.95□□□□□ -0.34
TMEM260-201ENST00000261556 DNAJB3Q8WWF6 145 aa12.95□□□□□ -0.34
TMEM260-201ENST00000261556 MOCOSQ96EN8 888 aa12.95□□□□□ -0.34
TMEM260-201ENST00000261556 NSMCE2Q96MF7 247 aa12.95□□□□□ -0.34
TMEM260-201ENST00000261556 CEP41Q9BYV8 373 aa12.95□□□□□ -0.34
TMEM260-201ENST00000261556 KCTD10Q9H3F6 313 aa12.95□□□□□ -0.34
TMEM260-201ENST00000261556 IFT22Q9H7X7 185 aa12.95□□□□□ -0.34
TMEM260-201ENST00000261556 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.95□□□□□ -0.34
TMEM260-201ENST00000261556 ING4Q9UNL4 249 aa12.95□□□□□ -0.34
TMEM260-201ENST00000261556 F8VP50 259 aa12.95□□□□□ -0.34
TMEM260-201ENST00000261556 M0QYT0 321 aa12.95□□□□□ -0.34
TMEM260-201ENST00000261556 FTH1P02794 183 aa12.95□□□□□ -0.34
TMEM260-201ENST00000261556 THP07101 528 aa12.95□□□□□ -0.34
TMEM260-201ENST00000261556 GABRB2P47870 512 aa12.95□□□□□ -0.34
TMEM260-201ENST00000261556 ERVFC1P60507 584 aa12.95□□□□□ -0.34
TMEM260-201ENST00000261556 RHDQ02161 417 aa12.95□□□□□ -0.34
TMEM260-201ENST00000261556 TWF1Q12792 350 aa12.95□□□□□ -0.34
TMEM260-201ENST00000261556 CRTC1Q6UUV9 634 aa12.95□□□□□ -0.34
TMEM260-201ENST00000261556 SZRD1Q7Z422 152 aa12.95□□□□□ -0.34
TMEM260-201ENST00000261556 TP53I13Q8NBR0 393 aaPredicted RBP12.95□□□□□ -0.34
TMEM260-201ENST00000261556 HCAR2Q8TDS4 363 aa12.95□□□□□ -0.34
TMEM260-201ENST00000261556 CENPNQ96H22 339 aaPredicted RBP12.95□□□□□ -0.34
TMEM260-201ENST00000261556 SLC39A13Q96H72 371 aa12.95□□□□□ -0.34
TMEM260-201ENST00000261556 DSN1Q9H410 356 aa12.95□□□□□ -0.34
TMEM260-201ENST00000261556 NANOGQ9H9S0 305 aa12.95□□□□□ -0.34
TMEM260-201ENST00000261556 GLTPQ9NZD2 209 aa12.95□□□□□ -0.34
TMEM260-201ENST00000261556 UBR1Q8IWV7 1749 aa12.95□□□□□ -0.34
TMEM260-201ENST00000261556 MYH3P11055 1940 aa12.94□□□□□ -0.34
TMEM260-201ENST00000261556 ZBTB14O43829 449 aa12.94□□□□□ -0.34
TMEM260-201ENST00000261556 INMTO95050 263 aa12.94□□□□□ -0.34
TMEM260-201ENST00000261556 DCKP27707 260 aa12.94□□□□□ -0.34
TMEM260-201ENST00000261556 CORO6Q6QEF8 472 aa12.94□□□□□ -0.34
TMEM260-201ENST00000261556 NUDT18Q6ZVK8 323 aa12.94□□□□□ -0.34
TMEM260-201ENST00000261556 LINC00523Q86TU6 105 aa12.94□□□□□ -0.34
TMEM260-201ENST00000261556 REPS2Q8NFH8 660 aa12.94□□□□□ -0.34
TMEM260-201ENST00000261556 FBXO30Q8TB52 745 aa12.94□□□□□ -0.34
TMEM260-201ENST00000261556 PNPT1Q8TCS8 783 aaKnown RBP12.94□□□□□ -0.34
TMEM260-201ENST00000261556 C1QTNF1Q9BXJ1 281 aa12.94□□□□□ -0.34
TMEM260-201ENST00000261556 PPIL3Q9H2H8 161 aaKnown RBP12.94□□□□□ -0.34
TMEM260-201ENST00000261556 CHRAC1Q9NRG0 131 aa12.94□□□□□ -0.34
TMEM260-201ENST00000261556 TCRBV7S3A2A0A539 114 aa12.94□□□□□ -0.34
TMEM260-201ENST00000261556 MANSC4A6NHS7 340 aaPredicted RBP12.94□□□□□ -0.34
TMEM260-201ENST00000261556 NCAM2O15394 837 aa12.94□□□□□ -0.34
TMEM260-201ENST00000261556 NOBOXO60393 691 aa12.94□□□□□ -0.34
TMEM260-201ENST00000261556 CD36P16671 472 aa12.94□□□□□ -0.34
TMEM260-201ENST00000261556 PLK1P53350 603 aa12.94□□□□□ -0.34
TMEM260-201ENST00000261556 ST8SIA6P61647 398 aa12.94□□□□□ -0.34
TMEM260-201ENST00000261556 IFITM2Q01629 132 aa12.94□□□□□ -0.34
TMEM260-201ENST00000261556 DPYSL3Q14195 570 aa12.94□□□□□ -0.34
TMEM260-201ENST00000261556 NPY5RQ15761 445 aa12.94□□□□□ -0.34
TMEM260-201ENST00000261556 ECM1Q16610 540 aa12.94□□□□□ -0.34
TMEM260-201ENST00000261556 CLHC1Q8NHS4 586 aa12.94□□□□□ -0.34
TMEM260-201ENST00000261556 ZNF669Q96BR6 464 aaPredicted RBP12.94□□□□□ -0.34
TMEM260-201ENST00000261556 MUC3BQ9H195 1237 aa12.94□□□□□ -0.34
TMEM260-201ENST00000261556 LRRC40Q9H9A6 602 aa12.94□□□□□ -0.34
TMEM260-201ENST00000261556 KIAA1522Q9P206 1035 aaPredicted RBP12.94□□□□□ -0.34
TMEM260-201ENST00000261556 TIMM13Q9Y5L4 95 aaPredicted RBP12.94□□□□□ -0.34
TMEM260-201ENST00000261556 ASTN2O75129 1339 aaPredicted RBP12.94□□□□□ -0.34
TMEM260-201ENST00000261556 CYP3A7-CYP3A51PA0A087WV96 503 aa12.94□□□□□ -0.34
TMEM260-201ENST00000261556 ABCB7O75027 752 aa12.94□□□□□ -0.34
TMEM260-201ENST00000261556 SOAT2O75908 522 aa12.94□□□□□ -0.34
TMEM260-201ENST00000261556 PAHP00439 452 aa12.94□□□□□ -0.34
TMEM260-201ENST00000261556 HDCP19113 662 aa12.94□□□□□ -0.34
TMEM260-201ENST00000261556 CYP3A7P24462 503 aa12.94□□□□□ -0.34
TMEM260-201ENST00000261556 ADCYAP1R1P41586 468 aa12.94□□□□□ -0.34
TMEM260-201ENST00000261556 ALDH6A1Q02252 535 aaKnown RBP12.94□□□□□ -0.34
TMEM260-201ENST00000261556 RPL6Q02878 288 aaKnown RBP12.94□□□□□ -0.34
TMEM260-201ENST00000261556 ZSWIM7Q19AV6 140 aa12.94□□□□□ -0.34
TMEM260-201ENST00000261556 ZNF404Q494X3 552 aa12.94□□□□□ -0.34
TMEM260-201ENST00000261556 ESCO2Q56NI9 601 aa12.94□□□□□ -0.34
TMEM260-201ENST00000261556 PYDC2Q56P42 97 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms