RNA–Protein interactions for RNA: ENST00000261368.12

SNCAIP-202, Transcript of synuclein alpha interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCAIP, Length 3,745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-202ENST00000261368 TBCDQ9BTW9 1192 aa16.12■□□□□ 0.17
SNCAIP-202ENST00000261368 THUMPD3Q9BV44 507 aaKnown RBP16.12■□□□□ 0.17
SNCAIP-202ENST00000261368 OSBPL6Q9BZF3 934 aa16.12■□□□□ 0.17
SNCAIP-202ENST00000261368 PLGRKTQ9HBL7 147 aa16.12■□□□□ 0.17
SNCAIP-202ENST00000261368 CMTM6Q9NX76 183 aa16.12■□□□□ 0.17
SNCAIP-202ENST00000261368 POLG2Q9UHN1 485 aa16.12■□□□□ 0.17
SNCAIP-202ENST00000261368 SQORQ9Y6N5 450 aa16.12■□□□□ 0.17
SNCAIP-202ENST00000261368 SCAMP3O14828 347 aaKnown RBP16.12■□□□□ 0.17
SNCAIP-202ENST00000261368 OR1G1P47890 313 aa16.12■□□□□ 0.17
SNCAIP-202ENST00000261368 LEPRP48357 1165 aaKnown RBP16.12■□□□□ 0.17
SNCAIP-202ENST00000261368 UFM1P61960 85 aa16.12■□□□□ 0.17
SNCAIP-202ENST00000261368 FSCN1Q16658 493 aaKnown RBP16.12■□□□□ 0.17
SNCAIP-202ENST00000261368 PTPRNQ16849 979 aa16.12■□□□□ 0.17
SNCAIP-202ENST00000261368 PPP4R4Q6NUP7 873 aa16.12■□□□□ 0.17
SNCAIP-202ENST00000261368 PRMT9Q6P2P2 845 aa16.12■□□□□ 0.17
SNCAIP-202ENST00000261368 PARP8Q8N3A8 854 aa16.12■□□□□ 0.17
SNCAIP-202ENST00000261368 OR13J1Q8NGT2 312 aa16.12■□□□□ 0.17
SNCAIP-202ENST00000261368 GFM2Q969S9 779 aaKnown RBP16.12■□□□□ 0.17
SNCAIP-202ENST00000261368 ZFYVE28Q9HCC9 887 aa16.12■□□□□ 0.17
SNCAIP-202ENST00000261368 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.12■□□□□ 0.17
SNCAIP-202ENST00000261368 LTBP3Q9NS15 1303 aa16.12■□□□□ 0.17
SNCAIP-202ENST00000261368 PTGES3LE9PB15 166 aa16.12■□□□□ 0.17
SNCAIP-202ENST00000261368 J3QRK9 145 aa16.12■□□□□ 0.17
SNCAIP-202ENST00000261368 B4GAT1O43505 415 aa16.12■□□□□ 0.17
SNCAIP-202ENST00000261368 PARNO95453 639 aaKnown RBP16.12■□□□□ 0.17
SNCAIP-202ENST00000261368 PIM1P11309 404 aaPredicted RBP16.12■□□□□ 0.17
SNCAIP-202ENST00000261368 RPS9P46781 194 aaKnown RBP16.12■□□□□ 0.17
SNCAIP-202ENST00000261368 IMPG1Q17R60 797 aa16.12■□□□□ 0.17
SNCAIP-202ENST00000261368 ATP6AP1LQ52LC2 224 aa16.12■□□□□ 0.17
SNCAIP-202ENST00000261368 TOP1MTQ969P6 601 aa16.12■□□□□ 0.17
SNCAIP-202ENST00000261368 FBXL8Q96CD0 374 aa16.12■□□□□ 0.17
SNCAIP-202ENST00000261368 PGAP3Q96FM1 320 aaPredicted RBP16.12■□□□□ 0.17
SNCAIP-202ENST00000261368 ZYG11BQ9C0D3 744 aa16.12■□□□□ 0.17
SNCAIP-202ENST00000261368 ANGPTL3Q9Y5C1 460 aa16.12■□□□□ 0.17
SNCAIP-202ENST00000261368 CDC7O00311 574 aa16.11■□□□□ 0.17
SNCAIP-202ENST00000261368 KPNA6O60684 536 aa16.11■□□□□ 0.17
SNCAIP-202ENST00000261368 ITGB1P05556 798 aa16.11■□□□□ 0.17
SNCAIP-202ENST00000261368 GPX3P22352 226 aa16.11■□□□□ 0.17
SNCAIP-202ENST00000261368 HMOX2P30519 316 aa16.11■□□□□ 0.17
SNCAIP-202ENST00000261368 C21orf59P57076 290 aa16.11■□□□□ 0.17
SNCAIP-202ENST00000261368 MRPS6P82932 125 aaKnown RBP16.11■□□□□ 0.17
SNCAIP-202ENST00000261368 NR6A1Q15406 480 aa16.11■□□□□ 0.17
SNCAIP-202ENST00000261368 SLC44A4Q53GD3 710 aa16.11■□□□□ 0.17
SNCAIP-202ENST00000261368 OR4L1Q8NH43 312 aa16.11■□□□□ 0.17
SNCAIP-202ENST00000261368 SEPT5Q99719 369 aaPredicted RBP16.11■□□□□ 0.17
SNCAIP-202ENST00000261368 CCM2LQ9NUG4 571 aaPredicted RBP16.11■□□□□ 0.17
SNCAIP-202ENST00000261368 TAS2R13Q9NYV9 303 aa16.11■□□□□ 0.17
SNCAIP-202ENST00000261368 MAP10Q9P2G4 905 aa16.11■□□□□ 0.17
SNCAIP-202ENST00000261368 ZMYM5Q9UJ78 669 aa16.11■□□□□ 0.17
SNCAIP-202ENST00000261368 HHLA1C9JL84 531 aa16.11■□□□□ 0.17
SNCAIP-202ENST00000261368 SLC7A4O43246 635 aa16.11■□□□□ 0.17
SNCAIP-202ENST00000261368 ACVRL1P37023 503 aa16.11■□□□□ 0.17
SNCAIP-202ENST00000261368 PIK3CGP48736 1102 aa16.11■□□□□ 0.17
SNCAIP-202ENST00000261368 MTPNP58546 118 aa16.11■□□□□ 0.17
SNCAIP-202ENST00000261368 AASDHQ4L235 1098 aaPredicted RBP16.11■□□□□ 0.17
SNCAIP-202ENST00000261368 TMTC4Q5T4D3 741 aa16.11■□□□□ 0.17
SNCAIP-202ENST00000261368 C9orf131Q5VYM1 1079 aa16.11■□□□□ 0.17
SNCAIP-202ENST00000261368 DDHD1Q8NEL9 900 aa16.11■□□□□ 0.17
SNCAIP-202ENST00000261368 STAG3L4Q8TBR4 150 aa16.11■□□□□ 0.17
SNCAIP-202ENST00000261368 GPR21Q99679 349 aa16.11■□□□□ 0.17
SNCAIP-202ENST00000261368 NAA50Q9GZZ1 169 aaKnown RBP16.11■□□□□ 0.17
SNCAIP-202ENST00000261368 SMPD3Q9NY59 655 aaPredicted RBP16.11■□□□□ 0.17
SNCAIP-202ENST00000261368 SLAMF8Q9P0V8 285 aa16.11■□□□□ 0.17
SNCAIP-202ENST00000261368 ACTL7AQ9Y615 435 aa16.11■□□□□ 0.17
SNCAIP-202ENST00000261368 TRIP12Q14669 1992 aaPredicted RBP16.11■□□□□ 0.17
SNCAIP-202ENST00000261368 GUCA1CO95843 209 aa16.11■□□□□ 0.17
SNCAIP-202ENST00000261368 YBX1P67809 324 aaKnown RBP16.11■□□□□ 0.17
SNCAIP-202ENST00000261368 FOXD4Q12950 439 aaPredicted RBP16.11■□□□□ 0.17
SNCAIP-202ENST00000261368 BNIP2Q12982 314 aa16.11■□□□□ 0.17
SNCAIP-202ENST00000261368 PLA2G4EQ3MJ16 856 aa16.11■□□□□ 0.17
SNCAIP-202ENST00000261368 ANKDD1AQ495B1 522 aa16.11■□□□□ 0.17
SNCAIP-202ENST00000261368 RAB41Q5JT25 222 aa16.11■□□□□ 0.17
SNCAIP-202ENST00000261368 HM13Q8TCT9 377 aa16.11■□□□□ 0.17
SNCAIP-202ENST00000261368 BRI3BPQ8WY22 251 aa16.11■□□□□ 0.17
SNCAIP-202ENST00000261368 SEPT8Q92599 483 aa16.11■□□□□ 0.17
SNCAIP-202ENST00000261368 TFAP2CQ92754 450 aa16.11■□□□□ 0.17
SNCAIP-202ENST00000261368 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.11■□□□□ 0.17
SNCAIP-202ENST00000261368 NRBF2Q96F24 287 aa16.11■□□□□ 0.17
SNCAIP-202ENST00000261368 ADAM2Q99965 735 aa16.11■□□□□ 0.17
SNCAIP-202ENST00000261368 BEGAINQ9BUH8 593 aa16.11■□□□□ 0.17
SNCAIP-202ENST00000261368 ANKRD60Q9BZ19 345 aa16.11■□□□□ 0.17
SNCAIP-202ENST00000261368 GALPQ9UBC7 116 aa16.11■□□□□ 0.17
SNCAIP-202ENST00000261368 CNOT11Q9UKZ1 510 aaKnown RBP16.11■□□□□ 0.17
SNCAIP-202ENST00000261368 TNPO2O14787 897 aaKnown RBP16.1■□□□□ 0.17
SNCAIP-202ENST00000261368 SLC6A2P23975 617 aa16.1■□□□□ 0.17
SNCAIP-202ENST00000261368 PRDX3P30048 256 aaKnown RBP16.1■□□□□ 0.17
SNCAIP-202ENST00000261368 ADRA1AP35348 466 aa16.1■□□□□ 0.17
SNCAIP-202ENST00000261368 NRG1Q02297 640 aaPredicted RBP16.1■□□□□ 0.17
SNCAIP-202ENST00000261368 PMS2P3Q13401 168 aa16.1■□□□□ 0.17
SNCAIP-202ENST00000261368 ZBED5Q49AG3 693 aa16.1■□□□□ 0.17
SNCAIP-202ENST00000261368 AGMOQ6ZNB7 445 aa16.1■□□□□ 0.17
SNCAIP-202ENST00000261368 FAM126BQ8IXS8 530 aa16.1■□□□□ 0.17
SNCAIP-202ENST00000261368 RNF168Q8IYW5 571 aaPredicted RBP16.1■□□□□ 0.17
SNCAIP-202ENST00000261368 BBS5Q8N3I7 341 aa16.1■□□□□ 0.17
SNCAIP-202ENST00000261368 OR4K2Q8NGD2 314 aa16.1■□□□□ 0.17
SNCAIP-202ENST00000261368 IRGQQ8WZA9 623 aa16.1■□□□□ 0.17
SNCAIP-202ENST00000261368 BHMTQ93088 406 aa16.1■□□□□ 0.17
SNCAIP-202ENST00000261368 FBXO32Q969P5 355 aa16.1■□□□□ 0.17
SNCAIP-202ENST00000261368 ACBD6Q9BR61 282 aa16.1■□□□□ 0.17
SNCAIP-202ENST00000261368 KATNAL1Q9BW62 490 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms