RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 TACR1P25103 407 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 OAS2P29728 719 aaKnown RBP5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 CAMK2GQ13555 558 aaPredicted RBP5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 GPR158Q5T848 1215 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 TPGS2Q68CL5 300 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 TLDC1Q6P9B6 456 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 SND1Q7KZF4 910 aaKnown RBP eCLIP5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 RASSF3Q86WH2 238 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 RIMKLAQ8IXN7 391 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 CCDC105Q8IYK2 499 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 NDNQ99608 321 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 P2RY13Q9BPV8 354 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 FAM96AQ9H5X1 160 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 WDCPQ9H6R7 721 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 PLLPQ9Y342 182 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 STARD9Q9P2P6 4700 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 CDC7O00311 574 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 STK10O94804 968 aaKnown RBP5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 ALADP13716 330 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 GABRG2P18507 467 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 CD86P42081 329 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 MASP1P48740 699 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 PFN3P60673 137 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 SULT2A1Q06520 285 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 NR1H3Q13133 447 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 MORF4L2Q15014 288 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 PPM1LQ5SGD2 360 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 GCNT7Q6ZNI0 430 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 C4orf33Q8N1A6 199 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 DCLK2Q8N568 766 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 IRF7Q92985 503 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 FAM193BQ96PV7 902 aaPredicted RBP5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 RANBP9Q96S59 729 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 C6orf106Q9H6K1 298 aaPredicted RBP5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 DNAJC15Q9Y5T4 150 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 PLIN3O60664 434 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 TPST2O60704 377 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 NDUFS2O75306 463 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 TGM2P21980 687 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 YWHAQP27348 245 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 GRIK1P39086 918 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 SLC6A12P48065 614 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 CDC42EP1Q00587 391 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 MS4A2Q01362 244 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 DEUP1Q05D60 604 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 PCDH1Q08174 1060 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 FLYWCH1Q4VC44 716 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 SLC9B1Q4ZJI4 515 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 UNC50Q53HI1 259 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 ZNF574Q6ZN55 896 aaPredicted RBP5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 EP400NLQ6ZTU2 488 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 TRIM74Q86UV6 250 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 SPATA24Q86W54 205 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 FAM86B1Q8N7N1 296 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 TCP10LQ8TDR4 215 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 OSCP1Q8WVF1 389 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 CDKN2AIPNLQ96HQ2 116 aa5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 IPO11Q9UI26 975 aaKnown RBP5.6□□□□□ -1.51
TOPBP1-201ENST00000260810 A0A0J9YYE9 177 aa5.59□□□□□ -1.51
TOPBP1-201ENST00000260810 PFDN6O15212 129 aa5.59□□□□□ -1.51
TOPBP1-201ENST00000260810 NIPSNAP2O75323 286 aa5.59□□□□□ -1.51
TOPBP1-201ENST00000260810 TRBC1P01850 177 aa5.59□□□□□ -1.51
TOPBP1-201ENST00000260810 TNNC2P02585 160 aa5.59□□□□□ -1.51
TOPBP1-201ENST00000260810 THY1P04216 161 aa5.59□□□□□ -1.51
TOPBP1-201ENST00000260810 TARSP26639 723 aaKnown RBP5.59□□□□□ -1.51
TOPBP1-201ENST00000260810 EPHB2P29323 1055 aa5.59□□□□□ -1.51
TOPBP1-201ENST00000260810 TRAF3Q13114 568 aa5.59□□□□□ -1.51
TOPBP1-201ENST00000260810 BOLA3Q53S33 107 aa5.59□□□□□ -1.51
TOPBP1-201ENST00000260810 BRMS1LQ5PSV4 323 aa5.59□□□□□ -1.51
TOPBP1-201ENST00000260810 KIAA1841Q6NSI8 718 aa5.59□□□□□ -1.51
TOPBP1-201ENST00000260810 LARP4Q71RC2 724 aaKnown RBP eCLIP5.59□□□□□ -1.51
TOPBP1-201ENST00000260810 CKAP2Q8WWK9 683 aa5.59□□□□□ -1.51
TOPBP1-201ENST00000260810 CTNNBL1Q8WYA6 563 aaPredicted RBP5.59□□□□□ -1.51
TOPBP1-201ENST00000260810 PAFAH2Q99487 392 aa5.59□□□□□ -1.51
TOPBP1-201ENST00000260810 KXD1Q9BQD3 176 aa5.59□□□□□ -1.51
TOPBP1-201ENST00000260810 RAB6BQ9NRW1 208 aa5.59□□□□□ -1.51
TOPBP1-201ENST00000260810 TDP1Q9NUW8 608 aa5.59□□□□□ -1.51
TOPBP1-201ENST00000260810 SEPT11Q9NVA2 429 aaKnown RBP5.59□□□□□ -1.51
TOPBP1-201ENST00000260810 ZMIZ1Q9ULJ6 1067 aa5.59□□□□□ -1.51
TOPBP1-201ENST00000260810 CARNS1A5YM72 827 aa5.59□□□□□ -1.51
TOPBP1-201ENST00000260810 XPOTO43592 962 aaKnown RBP5.59□□□□□ -1.51
TOPBP1-201ENST00000260810 RASSF9O75901 435 aa5.59□□□□□ -1.51
TOPBP1-201ENST00000260810 CKMP06732 381 aa5.59□□□□□ -1.51
TOPBP1-201ENST00000260810 SRGAP2BP0DMP2 458 aa5.59□□□□□ -1.51
TOPBP1-201ENST00000260810 MAGOHP61326 146 aaKnown RBP5.59□□□□□ -1.51
TOPBP1-201ENST00000260810 CBX1P83916 185 aa5.59□□□□□ -1.51
TOPBP1-201ENST00000260810 CUL1Q13616 776 aa5.59□□□□□ -1.51
TOPBP1-201ENST00000260810 SUSD1Q6UWL2 747 aa5.59□□□□□ -1.51
TOPBP1-201ENST00000260810 MRGPRX1Q96LB2 322 aa5.59□□□□□ -1.51
TOPBP1-201ENST00000260810 RBBP8Q99708 897 aa5.59□□□□□ -1.51
TOPBP1-201ENST00000260810 SLC22A11Q9NSA0 550 aa5.59□□□□□ -1.51
TOPBP1-201ENST00000260810 PCDHB5Q9Y5E4 795 aa5.59□□□□□ -1.51
TOPBP1-201ENST00000260810 DSCAML1Q8TD84 2053 aa5.59□□□□□ -1.51
TOPBP1-201ENST00000260810 PGLSO95336 258 aa5.59□□□□□ -1.51
TOPBP1-201ENST00000260810 IL1BP01584 269 aa5.59□□□□□ -1.51
TOPBP1-201ENST00000260810 CEACAM5P06731 702 aa5.59□□□□□ -1.51
TOPBP1-201ENST00000260810 ZNF37AP17032 561 aaPredicted RBP5.59□□□□□ -1.51
TOPBP1-201ENST00000260810 BCKDHBP21953 392 aa5.59□□□□□ -1.51
TOPBP1-201ENST00000260810 POLD2P49005 469 aa5.59□□□□□ -1.51
TOPBP1-201ENST00000260810 ADARP55265 1226 aaKnown RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms