RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 CCDC115Q96NT0 180 aa9.72□□□□□ -0.85
CTDSPL2-201ENST00000260327 ATP13A1Q9HD20 1204 aa9.72□□□□□ -0.85
CTDSPL2-201ENST00000260327 PRKAG2Q9UGJ0 569 aa9.72□□□□□ -0.85
CTDSPL2-201ENST00000260327 TIMM22Q9Y584 194 aa9.72□□□□□ -0.85
CTDSPL2-201ENST00000260327 PEX16Q9Y5Y5 336 aa9.72□□□□□ -0.85
CTDSPL2-201ENST00000260327 PGRMC2O15173 223 aa9.72□□□□□ -0.85
CTDSPL2-201ENST00000260327 MLYCDO95822 493 aa9.72□□□□□ -0.85
CTDSPL2-201ENST00000260327 PGK1P00558 417 aa9.72□□□□□ -0.85
CTDSPL2-201ENST00000260327 PGRP06401 933 aa9.72□□□□□ -0.85
CTDSPL2-201ENST00000260327 PIK3CGP48736 1102 aa9.72□□□□□ -0.85
CTDSPL2-201ENST00000260327 NRLP54845 237 aa9.72□□□□□ -0.85
CTDSPL2-201ENST00000260327 MERTKQ12866 999 aa9.72□□□□□ -0.85
CTDSPL2-201ENST00000260327 ZBED5Q49AG3 693 aa9.72□□□□□ -0.85
CTDSPL2-201ENST00000260327 RUNDC3AQ59EK9 446 aa9.72□□□□□ -0.85
CTDSPL2-201ENST00000260327 OR52J3Q8NH60 311 aa9.72□□□□□ -0.85
CTDSPL2-201ENST00000260327 MROH8Q9H579 483 aa9.72□□□□□ -0.85
CTDSPL2-201ENST00000260327 A0A1W2PPW3 197 aa9.72□□□□□ -0.85
CTDSPL2-201ENST00000260327 STX16-NPEPL1H3BU86 382 aa9.72□□□□□ -0.85
CTDSPL2-201ENST00000260327 UGT2B15P54855 530 aa9.72□□□□□ -0.85
CTDSPL2-201ENST00000260327 CXorf57Q6NSI4 855 aaKnown RBP9.72□□□□□ -0.85
CTDSPL2-201ENST00000260327 RBM12BQ8IXT5 1001 aaKnown RBP9.72□□□□□ -0.85
CTDSPL2-201ENST00000260327 CCDC185Q8N715 623 aa9.72□□□□□ -0.85
CTDSPL2-201ENST00000260327 AZIN2Q96A70 460 aa9.72□□□□□ -0.85
CTDSPL2-201ENST00000260327 SENP8Q96LD8 212 aa9.72□□□□□ -0.85
CTDSPL2-201ENST00000260327 DHX33Q9H6R0 707 aaKnown RBP9.72□□□□□ -0.85
CTDSPL2-201ENST00000260327 KAT8Q9H7Z6 458 aaKnown RBP9.72□□□□□ -0.85
CTDSPL2-201ENST00000260327 FBXO9Q9UK97 447 aaPredicted RBP9.72□□□□□ -0.85
CTDSPL2-201ENST00000260327 FBXO5Q9UKT4 447 aa9.72□□□□□ -0.85
CTDSPL2-201ENST00000260327 ZNF536O15090 1300 aa9.72□□□□□ -0.85
CTDSPL2-201ENST00000260327 ULK1O75385 1050 aa9.72□□□□□ -0.85
CTDSPL2-201ENST00000260327 METTL18O95568 372 aa9.72□□□□□ -0.85
CTDSPL2-201ENST00000260327 SNHG28P0DPA3 235 aa9.72□□□□□ -0.85
CTDSPL2-201ENST00000260327 NR2F6P10588 404 aa9.72□□□□□ -0.85
CTDSPL2-201ENST00000260327 ATF6P18850 670 aa9.72□□□□□ -0.85
CTDSPL2-201ENST00000260327 SDC2P34741 201 aa9.72□□□□□ -0.85
CTDSPL2-201ENST00000260327 CLCN2P51788 898 aa9.72□□□□□ -0.85
CTDSPL2-201ENST00000260327 THOP1P52888 689 aa9.72□□□□□ -0.85
CTDSPL2-201ENST00000260327 ATN1P54259 1190 aaPredicted RBP9.72□□□□□ -0.85
CTDSPL2-201ENST00000260327 SLC18A2Q05940 514 aa9.72□□□□□ -0.85
CTDSPL2-201ENST00000260327 LGI2Q8N0V4 545 aa9.72□□□□□ -0.85
CTDSPL2-201ENST00000260327 ZNF655Q8N720 491 aaPredicted RBP9.72□□□□□ -0.85
CTDSPL2-201ENST00000260327 GPR156Q8NFN8 814 aa9.72□□□□□ -0.85
CTDSPL2-201ENST00000260327 FAM126AQ9BYI3 521 aaPredicted RBP9.72□□□□□ -0.85
CTDSPL2-201ENST00000260327 PIGUQ9H490 435 aa9.72□□□□□ -0.85
CTDSPL2-201ENST00000260327 ZNF395Q9H8N7 513 aaPredicted RBP9.72□□□□□ -0.85
CTDSPL2-201ENST00000260327 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.72□□□□□ -0.852e-6■■■□□ 15.7
CTDSPL2-201ENST00000260327 XRCC1P18887 633 aaPredicted RBP9.72□□□□□ -0.85
CTDSPL2-201ENST00000260327 HKDC1Q2TB90 917 aa9.72□□□□□ -0.85
CTDSPL2-201ENST00000260327 CXXC5Q7LFL8 322 aaKnown RBP9.72□□□□□ -0.85
CTDSPL2-201ENST00000260327 CNTD1Q8N815 330 aa9.72□□□□□ -0.85
CTDSPL2-201ENST00000260327 DCBLD1Q8N8Z6 715 aa9.72□□□□□ -0.85
CTDSPL2-201ENST00000260327 PPP3R2Q96LZ3 170 aa9.72□□□□□ -0.85
CTDSPL2-201ENST00000260327 CHRAC1Q9NRG0 131 aa9.72□□□□□ -0.85
CTDSPL2-201ENST00000260327 SNTG1Q9NSN8 517 aa9.72□□□□□ -0.85
CTDSPL2-201ENST00000260327 TNFSF13BQ9Y275 285 aa9.72□□□□□ -0.85
CTDSPL2-201ENST00000260327 NID2Q14112 1375 aa9.71□□□□□ -0.85
CTDSPL2-201ENST00000260327 A0A1B0GVG6 124 aa9.71□□□□□ -0.85
CTDSPL2-201ENST00000260327 DNAJA2O60884 412 aa9.71□□□□□ -0.85
CTDSPL2-201ENST00000260327 MTHFD1P11586 935 aaKnown RBP9.71□□□□□ -0.85
CTDSPL2-201ENST00000260327 POLR2JP52435 117 aaKnown RBP9.71□□□□□ -0.85
CTDSPL2-201ENST00000260327 CYP1B1Q16678 543 aa9.71□□□□□ -0.85
CTDSPL2-201ENST00000260327 TNFAIP8L3Q5GJ75 292 aa9.71□□□□□ -0.85
CTDSPL2-201ENST00000260327 INTS11Q5TA45 600 aaKnown RBP9.71□□□□□ -0.85
CTDSPL2-201ENST00000260327 POTEHQ6S545 545 aa9.71□□□□□ -0.85
CTDSPL2-201ENST00000260327 C16orf59Q7L2K0 433 aa9.71□□□□□ -0.85
CTDSPL2-201ENST00000260327 TDRPQ86YL5 185 aa9.71□□□□□ -0.85
CTDSPL2-201ENST00000260327 ING5Q8WYH8 240 aa9.71□□□□□ -0.85
CTDSPL2-201ENST00000260327 ART5Q96L15 291 aa9.71□□□□□ -0.85
CTDSPL2-201ENST00000260327 CEP295NLQ96MC4 621 aa9.71□□□□□ -0.85
CTDSPL2-201ENST00000260327 BBS4Q96RK4 519 aa9.71□□□□□ -0.85
CTDSPL2-201ENST00000260327 PKP2Q99959 881 aa9.71□□□□□ -0.85
CTDSPL2-201ENST00000260327 MTRRQ9UBK8 725 aa9.71□□□□□ -0.85
CTDSPL2-201ENST00000260327 SLC25A13Q9UJS0 675 aa9.71□□□□□ -0.85
CTDSPL2-201ENST00000260327 DHRS7Q9Y394 339 aa9.71□□□□□ -0.85
CTDSPL2-201ENST00000260327 SUV39H1O43463 412 aa9.71□□□□□ -0.85
CTDSPL2-201ENST00000260327 MAFO75444 373 aaPredicted RBP9.71□□□□□ -0.85
CTDSPL2-201ENST00000260327 ITIH1P19827 911 aa9.71□□□□□ -0.85
CTDSPL2-201ENST00000260327 ADCYAP1R1P41586 468 aa9.71□□□□□ -0.85
CTDSPL2-201ENST00000260327 ARHGEF6Q15052 776 aa9.71□□□□□ -0.85
CTDSPL2-201ENST00000260327 CPSF6Q16630 551 aaKnown RBP eCLIP9.71□□□□□ -0.857e-8■■■□□ 16.3
CTDSPL2-201ENST00000260327 GALNT12Q8IXK2 581 aa9.71□□□□□ -0.85
CTDSPL2-201ENST00000260327 FAM20CQ8IXL6 584 aa9.71□□□□□ -0.85
CTDSPL2-201ENST00000260327 ANKRD52Q8NB46 1076 aa9.71□□□□□ -0.85
CTDSPL2-201ENST00000260327 SMPD4Q9NXE4 827 aa9.71□□□□□ -0.85
CTDSPL2-201ENST00000260327 TMEM59LQ9UK28 342 aa9.71□□□□□ -0.85
CTDSPL2-201ENST00000260327 NUP50Q9UKX7 468 aa9.71□□□□□ -0.85
CTDSPL2-201ENST00000260327 OAS3Q9Y6K5 1087 aaKnown RBP9.71□□□□□ -0.85
CTDSPL2-201ENST00000260327 ANKDD1BA6NHY2 528 aa9.71□□□□□ -0.85
CTDSPL2-201ENST00000260327 ZNF879B4DU55 563 aa9.71□□□□□ -0.85
CTDSPL2-201ENST00000260327 HPGDP15428 266 aa9.71□□□□□ -0.85
CTDSPL2-201ENST00000260327 DNAJB2P25686 324 aa9.71□□□□□ -0.85
CTDSPL2-201ENST00000260327 STT3AP46977 705 aa9.71□□□□□ -0.85
CTDSPL2-201ENST00000260327 GMFBP60983 142 aa9.71□□□□□ -0.85
CTDSPL2-201ENST00000260327 TGFBIQ15582 683 aa9.71□□□□□ -0.85
CTDSPL2-201ENST00000260327 TRMT10BQ6PF06 316 aaKnown RBP9.71□□□□□ -0.85
CTDSPL2-201ENST00000260327 KLHL24Q6TFL4 600 aa9.71□□□□□ -0.85
CTDSPL2-201ENST00000260327 ACAT2Q9BWD1 397 aa9.71□□□□□ -0.85
CTDSPL2-201ENST00000260327 SLC35C2Q9NQQ7 365 aa9.71□□□□□ -0.85
CTDSPL2-201ENST00000260327 TLR8Q9NR97 1041 aaKnown RBP9.71□□□□□ -0.85
CTDSPL2-201ENST00000260327 KPNA6O60684 536 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms