RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 ARPINQ7Z6K5 226 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 S100A7AQ86SG5 101 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 DNAAF5Q86Y56 855 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 RBM12BQ8IXT5 1001 aaKnown RBP4.03□□□□□ -1.76
RNF38-201ENST00000259605 MB21D2Q8IYB1 491 aaPredicted RBP4.03□□□□□ -1.76
RNF38-201ENST00000259605 CFAP52Q8N1V2 620 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 RIBC1Q8N443 379 aaPredicted RBP4.03□□□□□ -1.76
RNF38-201ENST00000259605 COLGALT1Q8NBJ5 622 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 TMEM178AQ8NBL3 297 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 AGBL5Q8NDL9 886 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 MYRIPQ8NFW9 859 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 SPATA20Q8TB22 786 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 SELENOMQ8WWX9 145 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 NACC2Q96BF6 587 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 KLHL29Q96CT2 875 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 TIMD4Q96H15 378 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 PPP1R10Q96QC0 940 aaKnown RBP4.03□□□□□ -1.76
RNF38-201ENST00000259605 NAA11Q9BSU3 229 aaPredicted RBP4.03□□□□□ -1.76
RNF38-201ENST00000259605 TRIM9Q9C026 710 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 CYP4F12Q9HCS2 524 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 AGPAT3Q9NRZ7 376 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 KCND1Q9NSA2 647 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 PPP1R14DQ9NXH3 145 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 APOBEC3BQ9UH17 382 aaKnown RBP4.03□□□□□ -1.76
RNF38-201ENST00000259605 DCDC2Q9UHG0 476 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 R3HDM2Q9Y2K5 976 aaKnown RBP4.03□□□□□ -1.76
RNF38-201ENST00000259605 ADAM18Q9Y3Q7 739 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 PCDHGA2Q9Y5H1 932 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 MAU2Q9Y6X3 613 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 ADGBQ8N7X0 1667 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 ATXN2Q99700 1313 aaKnown RBP4.03□□□□□ -1.76
RNF38-201ENST00000259605 TEX13CA0A0J9YWL9 993 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 TRIM64BA6NI03 449 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 DHX15O43143 795 aaKnown RBP4.03□□□□□ -1.76
RNF38-201ENST00000259605 PFDN1O60925 122 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 KCNJ13O60928 360 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 TRIM3O75382 744 aaPredicted RBP4.03□□□□□ -1.76
RNF38-201ENST00000259605 SEC22BO75396 215 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 OR6B1O95007 311 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 KLHL2O95198 593 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 EPN2O95208 641 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 STBD1O95210 358 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 MTHFD2P13995 350 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 GSPT1P15170 499 aaKnown RBP4.03□□□□□ -1.76
RNF38-201ENST00000259605 HSD3B2P26439 372 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 S100A3P33764 101 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 MPP3Q13368 585 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 SLC1A5Q15758 541 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 ZC3H12AQ5D1E8 599 aaKnown RBP4.03□□□□□ -1.76
RNF38-201ENST00000259605 CARD16Q5EG05 197 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 SAMD4BQ5PRF9 694 aaKnown RBP4.03□□□□□ -1.76
RNF38-201ENST00000259605 STXBP5Q5T5C0 1151 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 FAM91A1Q658Y4 838 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 SCARA3Q6AZY7 606 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 KCTD8Q6ZWB6 473 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 LRRTM4Q86VH4 590 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 ANKRD52Q8NB46 1076 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 ZNF398Q8TD17 642 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 TAS1R2Q8TE23 839 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 TMEM234Q8WY98 164 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 COPS5Q92905 334 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 PMEPA1Q969W9 287 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 LRIG1Q96JA1 1093 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 LENG8Q96PV6 779 aaPredicted RBP4.03□□□□□ -1.76
RNF38-201ENST00000259605 SLC38A2Q96QD8 506 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 VPS35Q96QK1 796 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 KCNK16Q96T55 309 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 PHF7Q9BWX1 381 aaPredicted RBP4.03□□□□□ -1.76
RNF38-201ENST00000259605 PITPNM3Q9BZ71 974 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 TRIM2Q9C040 744 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 SERHL2Q9H4I8 314 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 UBE2ZQ9H832 354 aaPredicted RBP4.03□□□□□ -1.76
RNF38-201ENST00000259605 ENY2Q9NPA8 101 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 OR12D3Q9UGF7 316 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 IL36AQ9UHA7 158 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 SLC6A14Q9UN76 642 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 HS3ST4Q9Y661 456 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 CNTNAP1P78357 1384 aa4.03□□□□□ -1.77
RNF38-201ENST00000259605 NCF1BA6NI72 391 aaPredicted RBP4.02□□□□□ -1.77
RNF38-201ENST00000259605 CENPXA8MT69 81 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 NCF1CA8MVU1 366 aaPredicted RBP4.02□□□□□ -1.77
RNF38-201ENST00000259605 HAX1O00165 279 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 RNF103O00237 685 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 FANCGO15287 622 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 TSPAN6O43657 245 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 SMNDC1O75940 238 aaKnown RBP eCLIP4.02□□□□□ -1.77
RNF38-201ENST00000259605 SOX30O94993 753 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 MFN2O95140 757 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 PAPSS2O95340 614 aaPredicted RBP4.02□□□□□ -1.77
RNF38-201ENST00000259605 SEMA4FO95754 770 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 AGR2O95994 175 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 NCF1P14598 390 aaPredicted RBP4.02□□□□□ -1.77
RNF38-201ENST00000259605 ITGA2P17301 1181 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 MYL12AP19105 171 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 HRH2P25021 359 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 STAT5AP42229 794 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 GRK6P43250 576 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 ARFIP2P53365 341 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 RAB25P57735 213 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 RAB2AP61019 212 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms