RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 CD84Q9UIB8 345 aa14.04□□□□□ -0.16
VPS25-201ENST00000253794 FKBPLQ9UIM3 349 aa14.04□□□□□ -0.16
VPS25-201ENST00000253794 RAB23Q9ULC3 237 aa14.04□□□□□ -0.16
VPS25-201ENST00000253794 TRBV5-4A0A0C4DH59 114 aa14.03□□□□□ -0.16
VPS25-201ENST00000253794 GLYATL1P3A0A0U1RQE8 302 aa14.03□□□□□ -0.16
VPS25-201ENST00000253794 ZCWPW2A0A1B0GU75 182 aa14.03□□□□□ -0.16
VPS25-201ENST00000253794 POM121BA6NF01 834 aa14.03□□□□□ -0.16
VPS25-201ENST00000253794 K7ESM1 405 aa14.03□□□□□ -0.16
VPS25-201ENST00000253794 BCAT2O15382 392 aaPredicted RBP14.03□□□□□ -0.16
VPS25-201ENST00000253794 BUD23O43709 281 aaKnown RBP14.03□□□□□ -0.16
VPS25-201ENST00000253794 SLC4A1P02730 911 aa14.03□□□□□ -0.16
VPS25-201ENST00000253794 RETP07949 1114 aa14.03□□□□□ -0.16
VPS25-201ENST00000253794 GNSP15586 552 aa14.03□□□□□ -0.16
VPS25-201ENST00000253794 MAOBP27338 520 aa14.03□□□□□ -0.16
VPS25-201ENST00000253794 CD38P28907 300 aa14.03□□□□□ -0.16
VPS25-201ENST00000253794 RABIFP47224 123 aa14.03□□□□□ -0.16
VPS25-201ENST00000253794 ARCN1P48444 511 aaKnown RBP14.03□□□□□ -0.16
VPS25-201ENST00000253794 CARSP49589 748 aaKnown RBP14.03□□□□□ -0.16
VPS25-201ENST00000253794 ARSDP51689 593 aa14.03□□□□□ -0.16
VPS25-201ENST00000253794 AFF3P51826 1226 aaKnown RBP14.03□□□□□ -0.16
VPS25-201ENST00000253794 KIAA1024LP59773 190 aa14.03□□□□□ -0.16
VPS25-201ENST00000253794 ITGA9Q13797 1035 aa14.03□□□□□ -0.16
VPS25-201ENST00000253794 INPP5AQ14642 412 aa14.03□□□□□ -0.16
VPS25-201ENST00000253794 STAT4Q14765 748 aa14.03□□□□□ -0.16
VPS25-201ENST00000253794 BBS9Q3SYG4 887 aa14.03□□□□□ -0.16
VPS25-201ENST00000253794 PLA2G2CQ5R387 149 aa14.03□□□□□ -0.16
VPS25-201ENST00000253794 CEP128Q6ZU80 1094 aa14.03□□□□□ -0.16
VPS25-201ENST00000253794 RGL4Q8IZJ4 473 aa14.03□□□□□ -0.16
VPS25-201ENST00000253794 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.03□□□□□ -0.16
VPS25-201ENST00000253794 STAMBPL1Q96FJ0 436 aa14.03□□□□□ -0.16
VPS25-201ENST00000253794 COX14Q96I36 57 aa14.03□□□□□ -0.16
VPS25-201ENST00000253794 PWWP2AQ96N64 755 aa14.03□□□□□ -0.16
VPS25-201ENST00000253794 AGAP2Q99490 1192 aa14.03□□□□□ -0.16
VPS25-201ENST00000253794 HINFPQ9BQA5 517 aa14.03□□□□□ -0.16
VPS25-201ENST00000253794 PLAC1Q9HBJ0 212 aa14.03□□□□□ -0.16
VPS25-201ENST00000253794 TMEM74BQ9NUR3 256 aa14.03□□□□□ -0.16
VPS25-201ENST00000253794 SLC2A6Q9UGQ3 507 aa14.03□□□□□ -0.16
VPS25-201ENST00000253794 CNOT6Q9ULM6 557 aaKnown RBP14.03□□□□□ -0.16
VPS25-201ENST00000253794 FADS2P1A8MWK0 482 aa14.02□□□□□ -0.17
VPS25-201ENST00000253794 VILLO15195 856 aa14.02□□□□□ -0.17
VPS25-201ENST00000253794 MAGEC1O60732 1142 aa14.02□□□□□ -0.17
VPS25-201ENST00000253794 SRP72O76094 671 aaKnown RBP14.02□□□□□ -0.17
VPS25-201ENST00000253794 PRAMEF1O95521 474 aa14.02□□□□□ -0.17
VPS25-201ENST00000253794 WNT1P04628 370 aa14.02□□□□□ -0.17
VPS25-201ENST00000253794 POLBP06746 335 aa14.02□□□□□ -0.17
VPS25-201ENST00000253794 MYCLP1P12525 358 aaPredicted RBP14.02□□□□□ -0.17
VPS25-201ENST00000253794 ARNTP27540 789 aa14.02□□□□□ -0.17
VPS25-201ENST00000253794 NMBRP28336 390 aa14.02□□□□□ -0.17
VPS25-201ENST00000253794 ELK3P41970 407 aa14.02□□□□□ -0.17
VPS25-201ENST00000253794 PDIA2Q13087 525 aaKnown RBP14.02□□□□□ -0.17
VPS25-201ENST00000253794 NFATC2Q13469 925 aa14.02□□□□□ -0.17
VPS25-201ENST00000253794 DUOXA1Q1HG43 343 aa14.02□□□□□ -0.17
VPS25-201ENST00000253794 GPR33Q49SQ1 333 aa14.02□□□□□ -0.17
VPS25-201ENST00000253794 ANKRD20A4Q4UJ75 823 aa14.02□□□□□ -0.17
VPS25-201ENST00000253794 RAET1GQ6H3X3 334 aa14.02□□□□□ -0.17
VPS25-201ENST00000253794 AFTPHQ6ULP2 937 aa14.02□□□□□ -0.17
VPS25-201ENST00000253794 SNX20Q7Z614 316 aa14.02□□□□□ -0.17
VPS25-201ENST00000253794 IGDCC3Q8IVU1 814 aa14.02□□□□□ -0.17
VPS25-201ENST00000253794 SCG3Q8WXD2 468 aaKnown RBP14.02□□□□□ -0.17
VPS25-201ENST00000253794 MFSD3Q96ES6 412 aa14.02□□□□□ -0.17
VPS25-201ENST00000253794 TBATAQ96M53 351 aa14.02□□□□□ -0.17
VPS25-201ENST00000253794 FMO2Q99518 471 aa14.02□□□□□ -0.17
VPS25-201ENST00000253794 APOOQ9BUR5 198 aa14.02□□□□□ -0.17
VPS25-201ENST00000253794 SPATA16Q9BXB7 569 aa14.02□□□□□ -0.17
VPS25-201ENST00000253794 WDR26Q9H7D7 661 aa14.02□□□□□ -0.17
VPS25-201ENST00000253794 CAPN10Q9HC96 672 aa14.02□□□□□ -0.17
VPS25-201ENST00000253794 MTRF1LQ9UGC7 380 aaKnown RBP14.02□□□□□ -0.17
VPS25-201ENST00000253794 TMPRSS11EQ9UL52 423 aa14.02□□□□□ -0.17
VPS25-201ENST00000253794 FAM169AQ9Y6X4 670 aa14.02□□□□□ -0.17
VPS25-201ENST00000253794 CACNA1EQ15878 2313 aa14.01□□□□□ -0.17
VPS25-201ENST00000253794 FRYLO94915 3013 aa14.01□□□□□ -0.17
VPS25-201ENST00000253794 CCDC162PA2VCL2 907 aa14.01□□□□□ -0.17
VPS25-201ENST00000253794 H0Y8X5 98 aa14.01□□□□□ -0.17
VPS25-201ENST00000253794 LRP3O75074 770 aa14.01□□□□□ -0.17
VPS25-201ENST00000253794 BANF1O75531 89 aa14.01□□□□□ -0.17
VPS25-201ENST00000253794 LMNAP02545 664 aaKnown RBP14.01□□□□□ -0.17
VPS25-201ENST00000253794 PCCBP05166 539 aa14.01□□□□□ -0.17
VPS25-201ENST00000253794 PAMP19021 973 aa14.01□□□□□ -0.17
VPS25-201ENST00000253794 MC4RP32245 332 aa14.01□□□□□ -0.17
VPS25-201ENST00000253794 FOXN2P32314 431 aa14.01□□□□□ -0.17
VPS25-201ENST00000253794 MPLP40238 635 aa14.01□□□□□ -0.17
VPS25-201ENST00000253794 GPR1P46091 355 aa14.01□□□□□ -0.17
VPS25-201ENST00000253794 CLDN2P57739 230 aa14.01□□□□□ -0.17
VPS25-201ENST00000253794 CDK3Q00526 305 aa14.01□□□□□ -0.17
VPS25-201ENST00000253794 CACNG1Q06432 222 aa14.01□□□□□ -0.17
VPS25-201ENST00000253794 CRYMQ14894 314 aa14.01□□□□□ -0.17
VPS25-201ENST00000253794 FASTKD3Q14CZ7 662 aaKnown RBP14.01□□□□□ -0.17
VPS25-201ENST00000253794 TEAD4Q15561 434 aa14.01□□□□□ -0.17
VPS25-201ENST00000253794 CHRNA6Q15825 494 aa14.01□□□□□ -0.17
VPS25-201ENST00000253794 ATP13A5Q4VNC0 1218 aa14.01□□□□□ -0.17
VPS25-201ENST00000253794 SPANXN3Q5MJ09 141 aa14.01□□□□□ -0.17
VPS25-201ENST00000253794 ALS2CLQ60I27 953 aa14.01□□□□□ -0.17
VPS25-201ENST00000253794 WDR93Q6P2C0 686 aa14.01□□□□□ -0.17
VPS25-201ENST00000253794 CASC4Q6P4E1 433 aa14.01□□□□□ -0.17
VPS25-201ENST00000253794 SLC23A3Q6PIS1 610 aa14.01□□□□□ -0.17
VPS25-201ENST00000253794 FAM151BQ6UXP7 276 aa14.01□□□□□ -0.17
VPS25-201ENST00000253794 CYS1Q717R9 158 aa14.01□□□□□ -0.17
VPS25-201ENST00000253794 HEATR4Q86WZ0 1026 aa14.01□□□□□ -0.17
VPS25-201ENST00000253794 SLC22A18ASQ8N1D0 253 aa14.01□□□□□ -0.17
VPS25-201ENST00000253794 DDHD1Q8NEL9 900 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms