RNA–Protein interactions for RNA: ENST00000253193.8

LRP3-201, Transcript of LDL receptor related protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP3, Length 3,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-201ENST00000253193 CLK4Q9HAZ1 481 aaKnown RBP18.38■□□□□ 0.53
LRP3-201ENST00000253193 NT5C1B-RDH14C9J2C7 533 aa18.38■□□□□ 0.53
LRP3-201ENST00000253193 VPS26AO75436 327 aa18.38■□□□□ 0.53
LRP3-201ENST00000253193 RPP40O75818 363 aaKnown RBP18.38■□□□□ 0.53
LRP3-201ENST00000253193 GUCA1CO95843 209 aa18.38■□□□□ 0.53
LRP3-201ENST00000253193 S100BP04271 92 aaPredicted RBP18.38■□□□□ 0.53
LRP3-201ENST00000253193 RPL26P61254 145 aaKnown RBP18.38■□□□□ 0.53
LRP3-201ENST00000253193 NEDD8Q15843 81 aa18.38■□□□□ 0.53
LRP3-201ENST00000253193 RALGPS2Q86X27 583 aaPredicted RBP18.38■□□□□ 0.53
LRP3-201ENST00000253193 TDRKHQ9Y2W6 561 aaKnown RBP18.38■□□□□ 0.53
LRP3-201ENST00000253193 CDC7O00311 574 aa18.38■□□□□ 0.53
LRP3-201ENST00000253193 ASGR1P07306 291 aa18.38■□□□□ 0.53
LRP3-201ENST00000253193 DNAJB1P25685 340 aa18.38■□□□□ 0.53
LRP3-201ENST00000253193 OR4D1Q15615 310 aa18.38■□□□□ 0.53
LRP3-201ENST00000253193 MSANTD2Q6P1R3 559 aa18.38■□□□□ 0.53
LRP3-201ENST00000253193 CDK15Q96Q40 435 aa18.38■□□□□ 0.53
LRP3-201ENST00000253193 APOL5Q9BWW9 433 aa18.38■□□□□ 0.53
LRP3-201ENST00000253193 ZMYM5Q9UJ78 669 aa18.38■□□□□ 0.53
LRP3-201ENST00000253193 PCDHGC4Q9Y5F7 938 aa18.38■□□□□ 0.53
LRP3-201ENST00000253193 PLOD2O00469 737 aa18.37■□□□□ 0.53
LRP3-201ENST00000253193 SOCS2O14508 198 aa18.37■□□□□ 0.53
LRP3-201ENST00000253193 HTRA2O43464 458 aaPredicted RBP18.37■□□□□ 0.53
LRP3-201ENST00000253193 DUSP11O75319 330 aaKnown RBP18.37■□□□□ 0.53
LRP3-201ENST00000253193 DNAJC14Q6Y2X3 702 aaPredicted RBP18.37■□□□□ 0.53
LRP3-201ENST00000253193 C16orf59Q7L2K0 433 aa18.37■□□□□ 0.53
LRP3-201ENST00000253193 SDCCAG3Q96C92 435 aa18.37■□□□□ 0.53
LRP3-201ENST00000253193 OAZ3Q9UMX2 235 aa18.37■□□□□ 0.53
LRP3-201ENST00000253193 RNF11Q9Y3C5 154 aa18.37■□□□□ 0.53
LRP3-201ENST00000253193 ZNF638Q14966 1978 aaKnown RBP18.37■□□□□ 0.53
LRP3-201ENST00000253193 A0A0D9SEW6 157 aa18.37■□□□□ 0.53
LRP3-201ENST00000253193 PENKP01210 267 aaPredicted RBP18.37■□□□□ 0.53
LRP3-201ENST00000253193 ALDOCP09972 364 aaKnown RBP18.37■□□□□ 0.53
LRP3-201ENST00000253193 OXCT1P55809 520 aa18.37■□□□□ 0.53
LRP3-201ENST00000253193 TRAP1Q12931 704 aaKnown RBP18.37■□□□□ 0.53
LRP3-201ENST00000253193 RETREG3Q86VR2 466 aa18.37■□□□□ 0.53
LRP3-201ENST00000253193 MAELQ96JY0 434 aaKnown RBP18.37■□□□□ 0.53
LRP3-201ENST00000253193 SUSD3Q96L08 255 aa18.37■□□□□ 0.53
LRP3-201ENST00000253193 TMEM74Q96NL1 305 aa18.37■□□□□ 0.53
LRP3-201ENST00000253193 TLR5O60602 858 aa18.37■□□□□ 0.53
LRP3-201ENST00000253193 FGF1P05230 155 aa18.37■□□□□ 0.53
LRP3-201ENST00000253193 HTR7P34969 479 aa18.37■□□□□ 0.53
LRP3-201ENST00000253193 AGTR2P50052 363 aa18.37■□□□□ 0.53
LRP3-201ENST00000253193 METTL6Q8TCB7 284 aa18.37■□□□□ 0.53
LRP3-201ENST00000253193 SMIM14Q96QK8 99 aa18.37■□□□□ 0.53
LRP3-201ENST00000253193 HOPXQ9BPY8 73 aaPredicted RBP18.37■□□□□ 0.53
LRP3-201ENST00000253193 SCUBE2Q9NQ36 999 aa18.37■□□□□ 0.53
LRP3-201ENST00000253193 A0A0U1RQS6 177 aa18.36■□□□□ 0.53
LRP3-201ENST00000253193 SYCE1LA8MT33 242 aa18.36■□□□□ 0.53
LRP3-201ENST00000253193 CD1DP15813 335 aa18.36■□□□□ 0.53
LRP3-201ENST00000253193 ZNF26P17031 533 aaPredicted RBP18.36■□□□□ 0.53
LRP3-201ENST00000253193 HLA-DPA1P20036 260 aa18.36■□□□□ 0.53
LRP3-201ENST00000253193 CA8P35219 290 aa18.36■□□□□ 0.53
LRP3-201ENST00000253193 NR6A1Q15406 480 aa18.36■□□□□ 0.53
LRP3-201ENST00000253193 CPNE9Q8IYJ1 553 aa18.36■□□□□ 0.53
LRP3-201ENST00000253193 PELI3Q8N2H9 469 aa18.36■□□□□ 0.53
LRP3-201ENST00000253193 NCLNQ969V3 563 aa18.36■□□□□ 0.53
LRP3-201ENST00000253193 SOX17Q9H6I2 414 aaPredicted RBP18.36■□□□□ 0.53
LRP3-201ENST00000253193 ATP13A1Q9HD20 1204 aa18.36■□□□□ 0.53
LRP3-201ENST00000253193 GALPQ9UBC7 116 aa18.36■□□□□ 0.53
LRP3-201ENST00000253193 STT3AP46977 705 aa18.36■□□□□ 0.53
LRP3-201ENST00000253193 KCNQ1P51787 676 aa18.36■□□□□ 0.53
LRP3-201ENST00000253193 ADARP55265 1226 aaKnown RBP18.36■□□□□ 0.53
LRP3-201ENST00000253193 LCP2Q13094 533 aa18.36■□□□□ 0.53
LRP3-201ENST00000253193 TMEM126BQ8IUX1 230 aa18.36■□□□□ 0.53
LRP3-201ENST00000253193 LRRC58Q96CX6 371 aa18.36■□□□□ 0.53
LRP3-201ENST00000253193 CDKN2AIPNLQ96HQ2 116 aa18.36■□□□□ 0.53
LRP3-201ENST00000253193 PPM1MQ96MI6 270 aa18.36■□□□□ 0.53
LRP3-201ENST00000253193 ASB2Q96Q27 587 aa18.36■□□□□ 0.53
LRP3-201ENST00000253193 NOL6Q9H6R4 1146 aaKnown RBP18.36■□□□□ 0.53
LRP3-201ENST00000253193 ZNF696Q9H7X3 374 aa18.36■□□□□ 0.53
LRP3-201ENST00000253193 CEPT1Q9Y6K0 416 aa18.36■□□□□ 0.53
LRP3-201ENST00000253193 NME4O00746 187 aa18.36■□□□□ 0.53
LRP3-201ENST00000253193 ZNF37AP17032 561 aaPredicted RBP18.36■□□□□ 0.53
LRP3-201ENST00000253193 CAPN3P20807 821 aa18.36■□□□□ 0.53
LRP3-201ENST00000253193 HMOX2P30519 316 aa18.36■□□□□ 0.53
LRP3-201ENST00000253193 PBX3P40426 434 aa18.36■□□□□ 0.53
LRP3-201ENST00000253193 PRMT9Q6P2P2 845 aa18.36■□□□□ 0.53
LRP3-201ENST00000253193 LARP4Q71RC2 724 aaKnown RBP eCLIP18.36■□□□□ 0.539e-6■■■■□ 21.5
LRP3-201ENST00000253193 TRIM74Q86UV6 250 aa18.36■□□□□ 0.53
LRP3-201ENST00000253193 TRIM73Q86UV7 250 aa18.36■□□□□ 0.53
LRP3-201ENST00000253193 GPSM1Q86YR5 675 aa18.36■□□□□ 0.53
LRP3-201ENST00000253193 TICAM1Q8IUC6 712 aa18.36■□□□□ 0.53
LRP3-201ENST00000253193 UMODL1-AS1Q8N2C9 162 aa18.36■□□□□ 0.53
LRP3-201ENST00000253193 DHRSXQ8N5I4 330 aa18.36■□□□□ 0.53
LRP3-201ENST00000253193 GAB3Q8WWW8 586 aa18.36■□□□□ 0.53
LRP3-201ENST00000253193 UBXN10Q96LJ8 280 aa18.36■□□□□ 0.53
LRP3-201ENST00000253193 THUMPD3Q9BV44 507 aaKnown RBP18.36■□□□□ 0.53
LRP3-201ENST00000253193 ZNF385DQ9H6B1 395 aa18.36■□□□□ 0.53
LRP3-201ENST00000253193 CCSER2Q9H7U1 834 aa18.36■□□□□ 0.53
LRP3-201ENST00000253193 RIC8BQ9NVN3 520 aa18.36■□□□□ 0.53
LRP3-201ENST00000253193 PKD2L2Q9NZM6 624 aa18.36■□□□□ 0.53
LRP3-201ENST00000253193 CROCCQ5TZA2 2017 aa18.35■□□□□ 0.53
LRP3-201ENST00000253193 CAPN15O75808 1086 aa18.35■□□□□ 0.53
LRP3-201ENST00000253193 IDO1P14902 403 aa18.35■□□□□ 0.53
LRP3-201ENST00000253193 LIPEQ05469 1076 aa18.35■□□□□ 0.53
LRP3-201ENST00000253193 DUSP4Q13115 394 aa18.35■□□□□ 0.53
LRP3-201ENST00000253193 DUS1LQ6P1R4 473 aaKnown RBP18.35■□□□□ 0.53
LRP3-201ENST00000253193 IL27RAQ6UWB1 636 aa18.35■□□□□ 0.53
LRP3-201ENST00000253193 SLC15A3Q8IY34 581 aa18.35■□□□□ 0.53
LRP3-201ENST00000253193 LRRC43Q8N309 656 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms