RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 TRIM40Q6P9F5 258 aa13.34□□□□□ -0.27
NEK4-201ENST00000233027 RBFAQ8N0V3 343 aa13.34□□□□□ -0.27
NEK4-201ENST00000233027 GPC2Q8N158 579 aa13.34□□□□□ -0.27
NEK4-201ENST00000233027 TDRD1Q9BXT4 1180 aaKnown RBP13.34□□□□□ -0.27
NEK4-201ENST00000233027 DPEP3Q9H4B8 488 aa13.34□□□□□ -0.27
NEK4-201ENST00000233027 PSME2Q9UL46 239 aa13.34□□□□□ -0.27
NEK4-201ENST00000233027 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.34□□□□□ -0.27
NEK4-201ENST00000233027 MAPRE3Q9UPY8 281 aa13.34□□□□□ -0.27
NEK4-201ENST00000233027 EFR3BQ9Y2G0 817 aa13.34□□□□□ -0.27
NEK4-201ENST00000233027 COQ6Q9Y2Z9 468 aa13.34□□□□□ -0.27
NEK4-201ENST00000233027 WASF2Q9Y6W5 498 aa13.34□□□□□ -0.27
NEK4-201ENST00000233027 IQCF5A8MTL0 148 aa13.34□□□□□ -0.27
NEK4-201ENST00000233027 TLR5O60602 858 aa13.34□□□□□ -0.27
NEK4-201ENST00000233027 GDF10P55107 478 aa13.34□□□□□ -0.27
NEK4-201ENST00000233027 SLC26A9Q7LBE3 791 aa13.34□□□□□ -0.27
NEK4-201ENST00000233027 LRRC49Q8IUZ0 686 aa13.34□□□□□ -0.27
NEK4-201ENST00000233027 PIK3C3Q8NEB9 887 aa13.34□□□□□ -0.27
NEK4-201ENST00000233027 SPATA22Q8NHS9 363 aa13.34□□□□□ -0.27
NEK4-201ENST00000233027 MFSD3Q96ES6 412 aa13.34□□□□□ -0.27
NEK4-201ENST00000233027 MYO19Q96H55 970 aa13.34□□□□□ -0.27
NEK4-201ENST00000233027 LENG8Q96PV6 779 aaPredicted RBP13.34□□□□□ -0.27
NEK4-201ENST00000233027 MYOCQ99972 504 aa13.34□□□□□ -0.27
NEK4-201ENST00000233027 MTFR1LQ9H019 292 aa13.34□□□□□ -0.27
NEK4-201ENST00000233027 TPK1Q9H3S4 243 aa13.34□□□□□ -0.27
NEK4-201ENST00000233027 COMMD9Q9P000 198 aa13.34□□□□□ -0.27
NEK4-201ENST00000233027 PRKAB1Q9Y478 270 aa13.34□□□□□ -0.27
NEK4-201ENST00000233027 UBE2QL1A1L167 161 aa13.34□□□□□ -0.27
NEK4-201ENST00000233027 AP3D1O14617 1153 aa13.34□□□□□ -0.27
NEK4-201ENST00000233027 CBFA2T3O75081 653 aa13.34□□□□□ -0.27
NEK4-201ENST00000233027 CILPO75339 1184 aa13.34□□□□□ -0.27
NEK4-201ENST00000233027 IL1BP01584 269 aa13.34□□□□□ -0.27
NEK4-201ENST00000233027 TRBC1P01850 177 aa13.34□□□□□ -0.27
NEK4-201ENST00000233027 CTSEP14091 401 aa13.34□□□□□ -0.27
NEK4-201ENST00000233027 BMP7P18075 431 aa13.34□□□□□ -0.27
NEK4-201ENST00000233027 NMBRP28336 390 aa13.34□□□□□ -0.27
NEK4-201ENST00000233027 CYP4F8P98187 520 aa13.34□□□□□ -0.27
NEK4-201ENST00000233027 MYBPC1Q00872 1141 aa13.34□□□□□ -0.27
NEK4-201ENST00000233027 LSM12Q3MHD2 195 aaKnown RBP13.34□□□□□ -0.27
NEK4-201ENST00000233027 FOXR2Q6PJQ5 311 aa13.34□□□□□ -0.27
NEK4-201ENST00000233027 BTN2A1Q7KYR7 527 aa13.34□□□□□ -0.27
NEK4-201ENST00000233027 APOLD1Q96LR9 279 aa13.34□□□□□ -0.27
NEK4-201ENST00000233027 GBA3Q9H227 469 aa13.34□□□□□ -0.27
NEK4-201ENST00000233027 EBF3Q9H4W6 596 aa13.34□□□□□ -0.27
NEK4-201ENST00000233027 CASKO14936 926 aa13.33□□□□□ -0.27
NEK4-201ENST00000233027 SLC25A14O95258 325 aaPredicted RBP13.33□□□□□ -0.27
NEK4-201ENST00000233027 SPATA31D3P0C874 917 aa13.33□□□□□ -0.27
NEK4-201ENST00000233027 RIPK1Q13546 671 aa13.33□□□□□ -0.27
NEK4-201ENST00000233027 ABHD15Q6UXT9 468 aa13.33□□□□□ -0.27
NEK4-201ENST00000233027 AGMOQ6ZNB7 445 aa13.33□□□□□ -0.27
NEK4-201ENST00000233027 SPATA31D4Q6ZUB0 917 aa13.33□□□□□ -0.27
NEK4-201ENST00000233027 MOB2Q70IA6 237 aa13.33□□□□□ -0.27
NEK4-201ENST00000233027 STRADAQ7RTN6 431 aa13.33□□□□□ -0.27
NEK4-201ENST00000233027 PGAM4Q8N0Y7 254 aa13.33□□□□□ -0.27
NEK4-201ENST00000233027 NAT16Q8N8M0 369 aa13.33□□□□□ -0.27
NEK4-201ENST00000233027 CSGALNACT1Q8TDX6 532 aa13.33□□□□□ -0.27
NEK4-201ENST00000233027 TLCD1Q96CP7 247 aa13.33□□□□□ -0.27
NEK4-201ENST00000233027 ING4Q9UNL4 249 aa13.33□□□□□ -0.27
NEK4-201ENST00000233027 OR10H1Q9Y4A9 318 aa13.33□□□□□ -0.27
NEK4-201ENST00000233027 PTCH2Q9Y6C5 1203 aa13.33□□□□□ -0.27
NEK4-201ENST00000233027 MANSC4A6NHS7 340 aaPredicted RBP13.33□□□□□ -0.28
NEK4-201ENST00000233027 FAM25EA8MYX2 175 aa13.33□□□□□ -0.28
NEK4-201ENST00000233027 FPGTO14772 594 aa13.33□□□□□ -0.28
NEK4-201ENST00000233027 PSEN1P49768 467 aa13.33□□□□□ -0.28
NEK4-201ENST00000233027 MANFP55145 182 aaKnown RBP13.33□□□□□ -0.28
NEK4-201ENST00000233027 SMIM11AP58511 58 aa13.33□□□□□ -0.28
NEK4-201ENST00000233027 PITRM1Q5JRX3 1037 aa13.33□□□□□ -0.28
NEK4-201ENST00000233027 HJURPQ8NCD3 748 aaPredicted RBP13.33□□□□□ -0.28
NEK4-201ENST00000233027 CCNB1IP1Q9NPC3 277 aa13.33□□□□□ -0.28
NEK4-201ENST00000233027 SAMD4AQ9UPU9 718 aaKnown RBP13.33□□□□□ -0.28
NEK4-201ENST00000233027 SH3GLB1Q9Y371 365 aa13.33□□□□□ -0.28
NEK4-201ENST00000233027 POU5F1Q01860 360 aaKnown RBP13.33□□□□□ -0.28
NEK4-201ENST00000233027 FKBP1CQ5VVH2 108 aa13.33□□□□□ -0.28
NEK4-201ENST00000233027 TAPT1Q6NXT6 567 aa13.33□□□□□ -0.28
NEK4-201ENST00000233027 KLHL24Q6TFL4 600 aa13.33□□□□□ -0.28
NEK4-201ENST00000233027 CXXC5Q7LFL8 322 aaKnown RBP13.33□□□□□ -0.28
NEK4-201ENST00000233027 ZNF655Q8N720 491 aaPredicted RBP13.33□□□□□ -0.28
NEK4-201ENST00000233027 FAM98AQ8NCA5 519 aaKnown RBP13.33□□□□□ -0.28
NEK4-201ENST00000233027 AP3S1Q92572 193 aa13.33□□□□□ -0.28
NEK4-201ENST00000233027 MCMBPQ9BTE3 642 aa13.33□□□□□ -0.28
NEK4-201ENST00000233027 TMEM165Q9HC07 324 aa13.33□□□□□ -0.28
NEK4-201ENST00000233027 EQTNQ9NQ60 294 aa13.33□□□□□ -0.28
NEK4-201ENST00000233027 DPP7Q9UHL4 492 aa13.33□□□□□ -0.28
NEK4-201ENST00000233027 CHRNB2P17787 502 aa13.33□□□□□ -0.28
NEK4-201ENST00000233027 ACLYP53396 1101 aa13.33□□□□□ -0.28
NEK4-201ENST00000233027 CRYBB1P53674 252 aaPredicted RBP13.33□□□□□ -0.28
NEK4-201ENST00000233027 RTP1P59025 263 aa13.33□□□□□ -0.28
NEK4-201ENST00000233027 LIPEQ05469 1076 aa13.33□□□□□ -0.28
NEK4-201ENST00000233027 CPTPQ5TA50 214 aa13.33□□□□□ -0.28
NEK4-201ENST00000233027 GPR142Q7Z601 462 aa13.33□□□□□ -0.28
NEK4-201ENST00000233027 CBR4Q8N4T8 237 aa13.33□□□□□ -0.28
NEK4-201ENST00000233027 OR52J3Q8NH60 311 aa13.33□□□□□ -0.28
NEK4-201ENST00000233027 RAB23Q9ULC3 237 aa13.33□□□□□ -0.28
NEK4-201ENST00000233027 MST1RQ04912 1400 aa13.33□□□□□ -0.28
NEK4-201ENST00000233027 ABHD14A-ACY1A0A1B0GW23 586 aa13.33□□□□□ -0.28
NEK4-201ENST00000233027 RPL3P39023 403 aaKnown RBP13.33□□□□□ -0.28
NEK4-201ENST00000233027 THOP1P52888 689 aa13.33□□□□□ -0.28
NEK4-201ENST00000233027 DSC2Q02487 901 aa13.33□□□□□ -0.28
NEK4-201ENST00000233027 LIN52Q52LA3 116 aa13.33□□□□□ -0.28
NEK4-201ENST00000233027 FAM182AQ5T1J6 154 aa13.33□□□□□ -0.28
NEK4-201ENST00000233027 LCLAT1Q6UWP7 414 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms